BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|7657405 odorant binding protein 2A precursor [Homo sapiens] (170 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|7657405 odorant binding protein 2A precursor [Homo sapiens] 347 4e-96 gi|7657407 odorant binding protein 2B [Homo sapiens] 310 5e-85 gi|4504963 lipocalin 1 precursor [Homo sapiens] 143 8e-35 gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens] 46 2e-05 gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens] 46 2e-05 gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens] 46 2e-05 gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens] 39 0.002 gi|65507519 glycodelin precursor [Homo sapiens] 37 0.011 gi|65507501 glycodelin precursor [Homo sapiens] 37 0.011 gi|48717447 lipocalin 9 [Homo sapiens] 35 0.031 gi|148226288 lipocalin-like 1 [Homo sapiens] 33 0.15 gi|38455402 lipocalin 2 [Homo sapiens] 32 0.20 gi|126116598 lipocalin 10 [Homo sapiens] 32 0.34 gi|24307939 chaperonin containing TCP1, subunit 5 (epsilon) [Hom... 30 1.0 gi|167857790 orosomucoid 1 precursor [Homo sapiens] 28 2.9 gi|41872631 fatty acid synthase [Homo sapiens] 28 3.8 gi|62988357 lipocalin 8 [Homo sapiens] 28 3.8 gi|89886464 lipocalcin 12 [Homo sapiens] 27 8.5 gi|7657359 contactin 5 isoform long [Homo sapiens] 27 8.5 gi|28373129 contactin 5 isoform short [Homo sapiens] 27 8.5 gi|31742492 Nedd4 binding protein 2 [Homo sapiens] 27 8.5 gi|40018629 hypothetical protein LOC23325 [Homo sapiens] 27 8.5 >gi|7657405 odorant binding protein 2A precursor [Homo sapiens] Length = 170 Score = 347 bits (889), Expect = 4e-96 Identities = 170/170 (100%), Positives = 170/170 (100%) Query: 1 MKTLFLGVTLGLAAALSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGG 60 MKTLFLGVTLGLAAALSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGG Sbjct: 1 MKTLFLGVTLGLAAALSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGG 60 Query: 61 NLEATFTFMREDRCIQKKILMRKTEEPGKFSAYGGRKLIYLQELPGTDDYVFYCKDQRRG 120 NLEATFTFMREDRCIQKKILMRKTEEPGKFSAYGGRKLIYLQELPGTDDYVFYCKDQRRG Sbjct: 61 NLEATFTFMREDRCIQKKILMRKTEEPGKFSAYGGRKLIYLQELPGTDDYVFYCKDQRRG 120 Query: 121 GLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCVLEH 170 GLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCVLEH Sbjct: 121 GLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCVLEH 170 >gi|7657407 odorant binding protein 2B [Homo sapiens] Length = 170 Score = 310 bits (793), Expect = 5e-85 Identities = 153/170 (90%), Positives = 158/170 (92%) Query: 1 MKTLFLGVTLGLAAALSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGG 60 MKTLFLGVTLGLAAALSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGG Sbjct: 1 MKTLFLGVTLGLAAALSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGG 60 Query: 61 NLEATFTFMREDRCIQKKILMRKTEEPGKFSAYGGRKLIYLQELPGTDDYVFYCKDQRRG 120 LEATFTFMREDRCIQKKILMRKTEEPGK+SAYGGRKL+YLQELP D Y+FYCKDQ G Sbjct: 61 KLEATFTFMREDRCIQKKILMRKTEEPGKYSAYGGRKLMYLQELPRRDHYIFYCKDQHHG 120 Query: 121 GLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCVLEH 170 GL +MGKLVGRN +TN EALEEFKKLVQ KGLSEEDIF PLQTGSCV EH Sbjct: 121 GLLHMGKLVGRNSDTNREALEEFKKLVQRKGLSEEDIFTPLQTGSCVPEH 170 >gi|4504963 lipocalin 1 precursor [Homo sapiens] Length = 176 Score = 143 bits (360), Expect = 8e-35 Identities = 78/172 (45%), Positives = 108/172 (62%), Gaps = 7/172 (4%) Query: 1 MKTLFLGVTLGLAAALS----FTLEEE--DITGTWYVKAMVVDKDFPEDRRPRKVSPVKV 54 MK L L V+LGL AAL +EE D++GTWY+KAM VD++FPE V+P+ + Sbjct: 1 MKPLLLAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAMTVDREFPE-MNLESVTPMTL 59 Query: 55 TALGGGNLEATFTFMREDRCIQKKILMRKTEEPGKFSAYGGRKLIYLQELPGTDDYVFYC 114 T L GGNLEA T + RC + K ++ KT+EPGK++A GG+ + Y+ D Y+FYC Sbjct: 60 TTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYC 119 Query: 115 KDQRRGGLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSC 166 + + G KLVGR+P NLEALE+F+K +GLS E I +P Q+ +C Sbjct: 120 EGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETC 171 >gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens] Length = 181 Score = 45.8 bits (107), Expect = 2e-05 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 12/172 (6%) Query: 4 LFLGVTLGLAA------ALSFTLEEEDITGTWYVKAMVVD-KDFPEDRRPRKVSPVKVTA 56 L LG+TL A A++ + I+G WY + D ++ E+ +V + Sbjct: 6 LCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFVKHIDY 65 Query: 57 LGGGNLEATFTFMREDRCIQKKILMRKTEEPGKFSA-YGGRKLIYLQELPGTDDYVFYCK 115 LG +L TF C + + + TE+ S Y G +I + E + FY K Sbjct: 66 LGNSSL----TFKLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYIYFYNK 121 Query: 116 DQRRGGLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCV 167 + + G M +L R P+ + + E F K + G+ +E+IF + C+ Sbjct: 122 NIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCL 173 >gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens] Length = 181 Score = 45.8 bits (107), Expect = 2e-05 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 12/172 (6%) Query: 4 LFLGVTLGLAA------ALSFTLEEEDITGTWYVKAMVVD-KDFPEDRRPRKVSPVKVTA 56 L LG+TL A A++ + I+G WY + D ++ E+ +V + Sbjct: 6 LCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFVKHIDY 65 Query: 57 LGGGNLEATFTFMREDRCIQKKILMRKTEEPGKFSA-YGGRKLIYLQELPGTDDYVFYCK 115 LG +L TF C + + + TE+ S Y G +I + E + FY K Sbjct: 66 LGNSSL----TFKLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYIYFYNK 121 Query: 116 DQRRGGLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCV 167 + + G M +L R P+ + + E F K + G+ +E+IF + C+ Sbjct: 122 NIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCL 173 >gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens] Length = 181 Score = 45.8 bits (107), Expect = 2e-05 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 12/172 (6%) Query: 4 LFLGVTLGLAA------ALSFTLEEEDITGTWYVKAMVVD-KDFPEDRRPRKVSPVKVTA 56 L LG+TL A A++ + I+G WY + D ++ E+ +V + Sbjct: 6 LCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFVKHIDY 65 Query: 57 LGGGNLEATFTFMREDRCIQKKILMRKTEEPGKFSA-YGGRKLIYLQELPGTDDYVFYCK 115 LG +L TF C + + + TE+ S Y G +I + E + FY K Sbjct: 66 LGNSSL----TFKLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYIYFYNK 121 Query: 116 DQRRGGLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCV 167 + + G M +L R P+ + + E F K + G+ +E+IF + C+ Sbjct: 122 NIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCL 173 >gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens] Length = 190 Score = 38.9 bits (89), Expect = 0.002 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 6/155 (3%) Query: 21 EEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALG-GGNLEATFTFMREDRCIQKKI 79 +++ G W+ + + + +++ V A G L T TF+R+++C + + Sbjct: 35 QQDKFLGRWFSAGLASNSSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTM 94 Query: 80 LMRKTEEPGKFS----AYGGRKLIYLQELPGTDDYVFYCKDQRRGGLRY-MGKLVGRNPN 134 L++ G +S +G + + E + Y + + G + M L R Sbjct: 95 LLQPAGSLGSYSYRSPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQT 154 Query: 135 TNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCVLE 169 E E+F + +G +E+ I QT C+ E Sbjct: 155 PRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCMTE 189 >gi|65507519 glycodelin precursor [Homo sapiens] Length = 180 Score = 36.6 bits (83), Expect = 0.011 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Query: 20 LEEEDITGTWYVKAMVVDKD--FPEDRRPRKVSPVKVTALGGGNLEATFTFMREDRCIQK 77 LE + GTW+ AM + + P +V + NLE + C++K Sbjct: 28 LELPKLAGTWHSMAMATNNISLMATLKAPLRVHITSLLPTPEDNLEIVLHRWENNSCVEK 87 Query: 78 KILMRKTEEPGKF 90 K+L KTE P KF Sbjct: 88 KVLGEKTENPKKF 100 >gi|65507501 glycodelin precursor [Homo sapiens] Length = 180 Score = 36.6 bits (83), Expect = 0.011 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Query: 20 LEEEDITGTWYVKAMVVDKD--FPEDRRPRKVSPVKVTALGGGNLEATFTFMREDRCIQK 77 LE + GTW+ AM + + P +V + NLE + C++K Sbjct: 28 LELPKLAGTWHSMAMATNNISLMATLKAPLRVHITSLLPTPEDNLEIVLHRWENNSCVEK 87 Query: 78 KILMRKTEEPGKF 90 K+L KTE P KF Sbjct: 88 KVLGEKTENPKKF 100 >gi|48717447 lipocalin 9 [Homo sapiens] Length = 176 Score = 35.0 bits (79), Expect = 0.031 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 10/130 (7%) Query: 1 MKTLFLGVTLGLAAALSF---TLEEED-----ITGTWYVKAMVVDK-DFPEDRRPRKVSP 51 M L L + L L AA F T+ + + ++G WY M D + ++ +V Sbjct: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60 Query: 52 VKVTALGGGNLEATFTFMREDRCIQKKILMRKTEEPGKFSA-YGGRKLIYLQELPGTDDY 110 + L G+L F +M + C+ ++ KTE+ G++S Y G+ + + E Sbjct: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120 Query: 111 VFYCKDQRRG 120 F+ ++ R G Sbjct: 121 TFHLQNFRNG 130 >gi|148226288 lipocalin-like 1 [Homo sapiens] Length = 164 Score = 32.7 bits (73), Expect = 0.15 Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 37 DKDFPEDRRPRKVSPVKVTALGGGNLEATFTF-MREDRCIQKKILMRKTEEPGKFSAYGG 95 D+DF + + K++ V VT LG G+L F + C + + PG+FS Sbjct: 8 DQDFLDSKDTMKMAVVLVTPLGNGDLALKFGYPTPHGGCQKMDTTFTEGAVPGQFSNPAM 67 Query: 96 RKLIYLQELPGTDDYVFYCKDQRRGGLR------YMGKLVGRNP 133 + + R+GGLR Y G+ GR P Sbjct: 68 ALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLYGGRAAGRRP 111 >gi|38455402 lipocalin 2 [Homo sapiens] Length = 198 Score = 32.3 bits (72), Expect = 0.20 Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 23/167 (13%) Query: 16 LSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGGNLEATFTFMREDRCI 75 L ++ G WYV + + ED+ P+K+ + T R+ +C Sbjct: 38 LQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCD 97 Query: 76 QKKILMRKTEEPGKFSAYGGRKLIYLQELPGTDDY--------------VFYCK-DQRRG 120 +PG+F+ L ++ PG Y VF+ K Q R Sbjct: 98 YWIRTFVPGCQPGEFT------LGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNRE 151 Query: 121 GLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCV 167 + L GR E E F + + GL E I P+ C+ Sbjct: 152 YFKIT--LYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCI 196 >gi|126116598 lipocalin 10 [Homo sapiens] Length = 200 Score = 31.6 bits (70), Expect = 0.34 Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 18/160 (11%) Query: 17 SFTLEEEDITGTWYVKAMVVDKDF---PEDRRPRKVSPVKVTALGGGNLEATFTFMREDR 73 S L +G WY+ A D D+R S VKV +G L F R Sbjct: 32 SHALNWNKFSGFWYILATATDAQGFLPARDKRKLGASVVKVNKVG--QLRVLLAFRRLKG 89 Query: 74 CIQKKILMRKTEEP---GKFSAYG--------GRKLIYLQELPGTD-DYVFYCKDQRRGG 121 C +++++RK + G AY G K + + TD Y R Sbjct: 90 CQSQEVILRKDGKKPVFGNACAYAAGPREGQEGVKGVKAFHVLSTDYSYGLVYLRLGRAT 149 Query: 122 LRYMGKLVGRNPN-TNLEALEEFKKLVQHKGLSEEDIFMP 160 Y L+ N ++ ++L+EF GLS+ + +P Sbjct: 150 QNYKNLLLFHRQNVSSFQSLKEFMDACDILGLSKAAVILP 189 >gi|24307939 chaperonin containing TCP1, subunit 5 (epsilon) [Homo sapiens] Length = 541 Score = 30.0 bits (66), Expect = 1.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 28 TWYVKAMVVDKDFPEDRRPRKVSPVKVTAL 57 T +K ++VDKDF + P+KV K+ L Sbjct: 222 TKLIKGVIVDKDFSHPQMPKKVEDAKIAIL 251 >gi|167857790 orosomucoid 1 precursor [Homo sapiens] Length = 201 Score = 28.5 bits (62), Expect = 2.9 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 8/92 (8%) Query: 70 REDRCIQKKILMRKTEEPGKFSAY--GGRKLIYLQELPGTDDYV--FYCKDQRRGGLRYM 125 R+D+CI + E G S Y G +L L T Y+ F D++ GL Sbjct: 86 RQDQCIYNTTYLNVQRENGTISRYVGGQEHFAHLLILRDTKTYMLAFDVNDEKNWGL--- 142 Query: 126 GKLVGRNPNTNLEALEEFKKLVQHKGLSEEDI 157 + P T E L EF + + + + D+ Sbjct: 143 -SVYADKPETTKEQLGEFYEALDCLRIPKSDV 173 >gi|41872631 fatty acid synthase [Homo sapiens] Length = 2511 Score = 28.1 bits (61), Expect = 3.8 Identities = 13/39 (33%), Positives = 20/39 (51%) Query: 49 VSPVKVTALGGGNLEATFTFMREDRCIQKKILMRKTEEP 87 V P+K T G +E F +M + + I K ++ EEP Sbjct: 1823 VRPLKCTVFHGAQVEDAFRYMAQGKHIGKVVVQVLAEEP 1861 >gi|62988357 lipocalin 8 [Homo sapiens] Length = 152 Score = 28.1 bits (61), Expect = 3.8 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Query: 20 LEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGGNLEATFTFMREDRCIQKKI 79 L+ + I G W + D+ P++V + +T L G NL + C +KI Sbjct: 4 LDRQKIGGFWREVGVASDQSLVLTA-PKRVEGLFLT-LSGSNLTVKVAYNSSGSCEIEKI 61 Query: 80 LMRKTEEPGKFSAYGGRKL 98 + + + GKF+ G R++ Sbjct: 62 VGSEIDSTGKFAFPGHREI 80 >gi|89886464 lipocalcin 12 [Homo sapiens] Length = 192 Score = 26.9 bits (58), Expect = 8.5 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 20/151 (13%) Query: 27 GTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGGNLEATFTFMREDRCIQKKILMRKTEE 86 G W+V + + PE R G E R C ++ + Sbjct: 41 GEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQ 100 Query: 87 PGKFSAYGGRKLIYLQELPGTD---------DYVFYCKDQRRGGLRYMG----KLVGRNP 133 PG+F+ G + PG D DY + R + L+GR+ Sbjct: 101 PGQFTVDHGVE-------PGADREETRVVDSDYTQFALMLSRRHTSRLAVLRISLLGRSW 153 Query: 134 NTNLEALEEFKKLVQHKGLSEEDIFMPLQTG 164 L++F L + +GLS+++I P TG Sbjct: 154 LLPPGTLDQFICLGRAQGLSDDNIVFPDVTG 184 >gi|7657359 contactin 5 isoform long [Homo sapiens] Length = 1100 Score = 26.9 bits (58), Expect = 8.5 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 12 LAAALSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGGNLEATFTFMRE 71 L+ TL + + G + K ++ FP K + VK+ GN T T+M+ Sbjct: 281 LSPPTPLTLRNDGVMGEYEPK---IEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV 337 Query: 72 DRCIQKKILMRKTE 85 + I K +RK++ Sbjct: 338 NGYIPSKARLRKSQ 351 >gi|28373129 contactin 5 isoform short [Homo sapiens] Length = 1026 Score = 26.9 bits (58), Expect = 8.5 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 12 LAAALSFTLEEEDITGTWYVKAMVVDKDFPEDRRPRKVSPVKVTALGGGNLEATFTFMRE 71 L+ TL + + G + K ++ FP K + VK+ GN T T+M+ Sbjct: 207 LSPPTPLTLRNDGVMGEYEPK---IEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV 263 Query: 72 DRCIQKKILMRKTE 85 + I K +RK++ Sbjct: 264 NGYIPSKARLRKSQ 277 >gi|31742492 Nedd4 binding protein 2 [Homo sapiens] Length = 1770 Score = 26.9 bits (58), Expect = 8.5 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 22/75 (29%) Query: 89 KFSAYGGRKLIYLQELPG---------------------TDDYVFYCKDQRRGGLRYMGK 127 K ++Y G L+ L+ LPG TDDY FY Q + ++Y+G+ Sbjct: 433 KKTSYVGLVLVLLRGLPGSGKSFLARTLQEDNPSGVILSTDDY-FYINGQYQFDVKYLGE 491 Query: 128 LVGRNPNTNLEALEE 142 N N EA E+ Sbjct: 492 AHEWNQNRAKEAFEK 506 >gi|40018629 hypothetical protein LOC23325 [Homo sapiens] Length = 1173 Score = 26.9 bits (58), Expect = 8.5 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 113 YCKDQRRGGLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSCVLEH 170 Y + R GGL + P+ LE + F++LV+ +GL+EE + S + +H Sbjct: 925 YVRMIRSGGLHCSSNAIRFVPD--LEDIVNFEELVKEEGLAEETLKAARHLDSVLSDH 980 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.139 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,626,398 Number of Sequences: 37866 Number of extensions: 292461 Number of successful extensions: 506 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 492 Number of HSP's gapped (non-prelim): 22 length of query: 170 length of database: 18,247,518 effective HSP length: 95 effective length of query: 75 effective length of database: 14,650,248 effective search space: 1098768600 effective search space used: 1098768600 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.