Guide to the Human Genome
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Name: PAEP Sequence: fasta or formatted (180aa) NCBI GI: 65507501
Description:

glycodelin precursor

Referenced in:

Ovary, Uterus and Placenta
Lacrimal and Salivary Glands

Other entries for this name:
alt mRNA [180aa] glycodelin precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         11           1
 C cysteine            3.3          6           1
 D aspartate           5.6         10           2
 E glutamate           6.7         12           2
 F phenylalanine       3.3          6           1
 G glycine             2.8          5           1
 H histidine           2.2          4           1
 I isoleucine          4.4          8           1
 K lysine              5.6         10           2
 L leucine            16.1         29           3
 M methionine          5.0          9           2
 N asparagine          5.0          9           2
 P proline             6.1         11           1
 Q glutamine           3.9          7           1
 R arginine            3.9          7           1
 S serine              2.8          5           1
 T threonine           7.8         14           3
 V valine              5.6         10           1
 W tryptophan          1.7          3           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycodelin precursor 
PAEP                  1.000   glycodelin precursor 
LCN9                  0.078   lipocalin 9 
LOC100129193          0.075   PREDICTED: similar to hCG1795014 
LOC100129193          0.075   PREDICTED: similar to hCG1795014 
LOC100129193          0.075   PREDICTED: similar to hCG1795014 
AMBP                  0.038   alpha-1-microglobulin/bikunin preproprotein 
RBP4                  0.035   retinol-binding protein 4, plasma precursor 
OBP2A                 0.035   odorant binding protein 2A precursor 
LCN1                  0.032   lipocalin 1 precursor 
LCN15                 0.029   lipocalin 15 
OBP2B                 0.023   odorant binding protein 2B 
ZNF385C               0.009   PREDICTED: zinc finger protein 385C 
ZNF385C               0.009   PREDICTED: zinc finger protein 385C 
ZNF385C               0.009   PREDICTED: zinc finger protein 385C 
UBE2U                 0.006   ubiquitin-conjugating enzyme E2U (putative) 
DDI1                  0.006   DDI1, DNA-damage inducible 1, homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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