Guide to the Human Genome
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Name: ORM1 Sequence: fasta or formatted (201aa) NCBI GI: 167857790
Description:

orosomucoid 1 precursor

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         11           1
 C cysteine            2.0          4           1
 D aspartate           5.5         11           1
 E glutamate          10.0         20           2
 F phenylalanine       4.5          9           2
 G glycine             3.5          7           2
 H histidine           1.5          3           1
 I isoleucine          5.0         10           1
 K lysine              7.0         14           2
 L leucine            10.4         21           2
 M methionine          1.0          2           1
 N asparagine          5.0         10           1
 P proline             4.0          8           1
 Q glutamine           5.5         11           1
 R arginine            4.5          9           1
 S serine              4.0          8           1
 T threonine           8.5         17           2
 V valine              5.5         11           2
 W tryptophan          2.0          4           1
 Y tyrosine            5.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   orosomucoid 1 precursor 
ORM2                  0.900   orosomucoid 2 
SLC39A12              0.015   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.015   solute carrier family 39 (zinc transporter), member...
NPY1R                 0.013   neuropeptide Y receptor Y1 
SLC30A2               0.013   solute carrier family 30, member 2 isoform 2 
SLC30A2               0.013   solute carrier family 30, member 2 isoform 1 
OBP2B                 0.013   odorant binding protein 2B 
C20orf19              0.010   non-protein coding RNA 153 isoform 1 
OBP2A                 0.008   odorant binding protein 2A precursor 
RPS2                  0.008   ribosomal protein S2 
THEM4                 0.008   thioesterase superfamily member 4 
LMOD2                 0.008   leiomodin 2 (cardiac) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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