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Search of human proteins with 7657104
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7657104 G0/G1switch 2 [Homo sapiens]
(103 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7657104 G0/G1switch 2 [Homo sapiens] 196 4e-51
gi|4503943 glutaryl-Coenzyme A dehydrogenase isoform a precursor... 32 0.14
gi|7669494 glutaryl-Coenzyme A dehydrogenase isoform b precursor... 32 0.14
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 30 0.41
gi|194018478 TBC1 domain family, member 2B isoform a [Homo sapiens] 28 1.2
gi|194018476 TBC1 domain family, member 2B isoform b [Homo sapiens] 28 1.2
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 28 1.6
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 28 1.6
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 28 1.6
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 28 1.6
gi|153945715 myosin VC [Homo sapiens] 28 2.0
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa... 28 2.0
gi|156938257 leucine rich repeat containing 16B [Homo sapiens] 27 2.6
gi|164607124 Fanconi anemia, complementation group I isoform 1 [... 27 3.5
gi|16262452 cingulin [Homo sapiens] 27 3.5
gi|82830440 Fanconi anemia, complementation group I isoform 2 [H... 27 3.5
gi|205360947 microtubule associated monoxygenase, calponin and L... 27 4.5
gi|226530313 microtubule associated monoxygenase, calponin and L... 27 4.5
gi|157502225 Janus kinase and microtubule interacting protein 3 ... 26 5.9
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 26 5.9
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 26 5.9
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 26 5.9
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 26 5.9
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 26 5.9
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 26 5.9
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 26 5.9
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 26 5.9
gi|219555700 leucine rich repeat containing 27 isoform a [Homo s... 26 5.9
gi|55741567 leucine rich repeat containing 27 isoform a [Homo sa... 26 5.9
gi|4502303 mitochondrial ATP synthase, O subunit precursor [Homo... 26 7.7
>gi|7657104 G0/G1switch 2 [Homo sapiens]
Length = 103
Score = 196 bits (497), Expect = 4e-51
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 METVQELIPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQE 60
METVQELIPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQE
Sbjct: 1 METVQELIPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQE 60
Query: 61 AAVAELQAALERQALQKQALQEKGKQQDTVLGGRALSNRQHAS 103
AAVAELQAALERQALQKQALQEKGKQQDTVLGGRALSNRQHAS
Sbjct: 61 AAVAELQAALERQALQKQALQEKGKQQDTVLGGRALSNRQHAS 103
>gi|4503943 glutaryl-Coenzyme A dehydrogenase isoform a precursor
[Homo sapiens]
Length = 438
Score = 31.6 bits (70), Expect = 0.14
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 18/101 (17%)
Query: 1 METVQELIPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQE 60
++ +Q +PLA+ + QK+ M+ LG L LG RL+DQ+
Sbjct: 317 LDRMQFGVPLARNQLIQKKLADMLTEITLGLHACL---QLG-------------RLKDQD 360
Query: 61 AAVAELQAALERQALQKQALQEKGKQQDTVLGGRALSNRQH 101
A E+ + L+R K + +Q +LGG +S+ H
Sbjct: 361 KAAPEMVSLLKRNNCGKAL--DIARQARDMLGGNGISDEYH 399
>gi|7669494 glutaryl-Coenzyme A dehydrogenase isoform b precursor
[Homo sapiens]
Length = 428
Score = 31.6 bits (70), Expect = 0.14
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 18/101 (17%)
Query: 1 METVQELIPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQE 60
++ +Q +PLA+ + QK+ M+ LG L LG RL+DQ+
Sbjct: 317 LDRMQFGVPLARNQLIQKKLADMLTEITLGLHACL---QLG-------------RLKDQD 360
Query: 61 AAVAELQAALERQALQKQALQEKGKQQDTVLGGRALSNRQH 101
A E+ + L+R K + +Q +LGG +S+ H
Sbjct: 361 KAAPEMVSLLKRNNCGKAL--DIARQARDMLGGNGISDEYH 399
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 30.0 bits (66), Expect = 0.41
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 53 ARRLRDQEAAVA-ELQAALERQALQKQALQEK 83
ARRL+ EA+ ELQ+ALE + KQ LQE+
Sbjct: 731 ARRLQKMEASARLELQSALEAEIRAKQGLQER 762
>gi|194018478 TBC1 domain family, member 2B isoform a [Homo sapiens]
Length = 963
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 5 QELIPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQEAAVA 64
+EL L K++ +QK ++++ V S + L E V P L ++ +
Sbjct: 349 EELEQLKKDLSSQKELVRLLQQTVRSSQYDKYFTSSRLCEGV--PKDTLELLHQKDDQIL 406
Query: 65 ELQAALERQALQKQALQEKGKQQDTVLG 92
L + LER +L+K++LQ++ + + +G
Sbjct: 407 GLTSQLERFSLEKESLQQEVRTLKSKVG 434
>gi|194018476 TBC1 domain family, member 2B isoform b [Homo sapiens]
Length = 914
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 5 QELIPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQEAAVA 64
+EL L K++ +QK ++++ V S + L E V P L ++ +
Sbjct: 349 EELEQLKKDLSSQKELVRLLQQTVRSSQYDKYFTSSRLCEGV--PKDTLELLHQKDDQIL 406
Query: 65 ELQAALERQALQKQALQEKGKQQDTVLG 92
L + LER +L+K++LQ++ + + +G
Sbjct: 407 GLTSQLERFSLEKESLQQEVRTLKSKVG 434
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 60 EAAVAELQAALERQALQKQALQEKGKQQDTVL 91
EA +A+L+ +E++A +KQA + KQ+D L
Sbjct: 1820 EAKIAQLEEQVEQEAREKQAATKSLKQKDKKL 1851
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 60 EAAVAELQAALERQALQKQALQEKGKQQDTVL 91
EA +A+L+ +E++A +KQA + KQ+D L
Sbjct: 1827 EAKIAQLEEQVEQEAREKQAATKSLKQKDKKL 1858
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 60 EAAVAELQAALERQALQKQALQEKGKQQDTVL 91
EA +A+L+ +E++A +KQA + KQ+D L
Sbjct: 1827 EAKIAQLEEQVEQEAREKQAATKSLKQKDKKL 1858
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 60 EAAVAELQAALERQALQKQALQEKGKQQDTVL 91
EA +A+L+ +E++A +KQA + KQ+D L
Sbjct: 1820 EAKIAQLEEQVEQEAREKQAATKSLKQKDKKL 1851
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 27.7 bits (60), Expect = 2.0
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 41 GLMETVCSPFTAARRLRDQEAAVAELQAALERQALQKQALQEKGKQQDTVLGGRALSNRQ 100
GL+E + S AA R D E + +L+A LE+ A ++ +EKGK+ + + ++
Sbjct: 907 GLVEKLTS--LAALRAGDVEK-IQKLEAELEKAATHRRNYEEKGKRYRDAVEEKLAKLQK 963
Query: 101 HAS 103
H S
Sbjct: 964 HNS 966
>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
sapiens]
Length = 1819
Score = 27.7 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 44 ETVCSPFTAARRLRDQEAAVAELQAALERQALQ 76
E + F+ AR LRD+E + L+ LER+A Q
Sbjct: 726 EELDDDFSYARELRDRERRLKSLEEELERKARQ 758
>gi|156938257 leucine rich repeat containing 16B [Homo sapiens]
Length = 1372
Score = 27.3 bits (59), Expect = 2.6
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 1 METVQELIPLAKEMMAQKRKGKMV--KLYVLGSVLALFGVVLGLMETVCSPFTAARRLRD 58
+E VQ+ + A++++ + + + LY LG VLA G V +E+V S +
Sbjct: 708 LEPVQDELLYARDLIKDAKNSRALFPSLYELGHVLANDGPVRQRLESVASEVS------- 760
Query: 59 QEAAVAELQAALERQALQKQAL 80
+A ELQ LE Q L
Sbjct: 761 -KAVDKELQVILESMVSLTQEL 781
>gi|164607124 Fanconi anemia, complementation group I isoform 1
[Homo sapiens]
Length = 1328
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 8 IPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQEAAVAE 65
IP + E +K KGK + L L + +F V + F A + D+E E
Sbjct: 888 IPTSVEESGKKEKGKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEERE 945
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 57 RDQEAAVAELQAALERQALQKQ----ALQEKGKQQDTVLGGRA 95
R EA + E Q L R ++Q AL+E+GKQ++ + G+A
Sbjct: 796 RALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKA 838
>gi|82830440 Fanconi anemia, complementation group I isoform 2 [Homo
sapiens]
Length = 1268
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 8 IPLAKEMMAQKRKGKMVKLYVLGSVLALFGVVLGLMETVCSPFTAARRLRDQEAAVAE 65
IP + E +K KGK + L L + +F V + F A + D+E E
Sbjct: 828 IPTSVEESGKKEKGKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEERE 885
>gi|205360947 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 1 [Homo sapiens]
Length = 1067
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 43 METVCSPFTAARRLRDQEAAVAELQAALERQALQKQALQEKGKQQDTVLGGRAL 96
M+ C T RRL + EAA+ EL+A + L + +QQ + G+ L
Sbjct: 922 MKRFCKAQTIQRRLNEIEAALRELEAEGVKLELALRRQSSSPEQQKKLWVGQLL 975
>gi|226530313 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 2 [Homo sapiens]
Length = 981
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 43 METVCSPFTAARRLRDQEAAVAELQAALERQALQKQALQEKGKQQDTVLGGRAL 96
M+ C T RRL + EAA+ EL+A + L + +QQ + G+ L
Sbjct: 836 MKRFCKAQTIQRRLNEIEAALRELEAEGVKLELALRRQSSSPEQQKKLWVGQLL 889
>gi|157502225 Janus kinase and microtubule interacting protein 3
[Homo sapiens]
Length = 844
Score = 26.2 bits (56), Expect = 5.9
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 42 LMETVCSPFTAARRLRDQEAAVAELQAALERQALQKQALQEKGKQQDTVLGGRALSNR 99
L E V A R ++ +E AE+Q A R ++AL E+G+ + +AL R
Sbjct: 519 LQEQVGGTLDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQALYRR 576
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 RRLRDQEAAVAELQAALERQALQKQALQEKGKQQ 87
R L+++ AVA+L+ ER+A Q+QA E+ +++
Sbjct: 1594 RSLQEEHVAVAQLREEAERRA-QQQAEAERAREE 1626
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 RRLRDQEAAVAELQAALERQALQKQALQEKGKQQ 87
R L+++ AVA+L+ ER+A Q+QA E+ +++
Sbjct: 1598 RSLQEEHVAVAQLREEAERRA-QQQAEAERAREE 1630
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 RRLRDQEAAVAELQAALERQALQKQALQEKGKQQ 87
R L+++ AVA+L+ ER+A Q+QA E+ +++
Sbjct: 1594 RSLQEEHVAVAQLREEAERRA-QQQAEAERAREE 1626
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 RRLRDQEAAVAELQAALERQALQKQALQEKGKQQ 87
R L+++ AVA+L+ ER+A Q+QA E+ +++
Sbjct: 1562 RSLQEEHVAVAQLREEAERRA-QQQAEAERAREE 1594
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 RRLRDQEAAVAELQAALERQALQKQALQEKGKQQ 87
R L+++ AVA+L+ ER+A Q+QA E+ +++
Sbjct: 1731 RSLQEEHVAVAQLREEAERRA-QQQAEAERAREE 1763
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 RRLRDQEAAVAELQAALERQALQKQALQEKGKQQ 87
R L+++ AVA+L+ ER+A Q+QA E+ +++
Sbjct: 1572 RSLQEEHVAVAQLREEAERRA-QQQAEAERAREE 1604
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 RRLRDQEAAVAELQAALERQALQKQALQEKGKQQ 87
R L+++ AVA+L+ ER+A Q+QA E+ +++
Sbjct: 1580 RSLQEEHVAVAQLREEAERRA-QQQAEAERAREE 1612
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 RRLRDQEAAVAELQAALERQALQKQALQEKGKQQ 87
R L+++ AVA+L+ ER+A Q+QA E+ +++
Sbjct: 1621 RSLQEEHVAVAQLREEAERRA-QQQAEAERAREE 1653
>gi|219555700 leucine rich repeat containing 27 isoform a [Homo
sapiens]
Length = 530
Score = 26.2 bits (56), Expect = 5.9
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 42 LMETVCSPFTAA-RRLRDQEAAVAELQAALERQALQKQALQEKGKQQD 88
++ + SP+ A R R +E+ A L+ E+QAL +Q +EK Q+
Sbjct: 318 ILPDLLSPYQMAIRAKRLEESRAAALRELQEKQALMEQQRREKRALQE 365
>gi|55741567 leucine rich repeat containing 27 isoform a [Homo
sapiens]
Length = 530
Score = 26.2 bits (56), Expect = 5.9
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 42 LMETVCSPFTAA-RRLRDQEAAVAELQAALERQALQKQALQEKGKQQD 88
++ + SP+ A R R +E+ A L+ E+QAL +Q +EK Q+
Sbjct: 318 ILPDLLSPYQMAIRAKRLEESRAAALRELQEKQALMEQQRREKRALQE 365
>gi|4502303 mitochondrial ATP synthase, O subunit precursor [Homo
sapiens]
Length = 213
Score = 25.8 bits (55), Expect = 7.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 59 QEAAVAELQAALERQALQKQALQEKGKQQDTVLGG 93
+EA ++EL+ L+ Q Q L+ + K ++LGG
Sbjct: 150 EEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGG 184
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.129 0.338
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,918,604
Number of Sequences: 37866
Number of extensions: 89428
Number of successful extensions: 754
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 84
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.