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Search of human proteins with 7656952
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7656952 calcyclin binding protein isoform 1 [Homo sapiens]
(228 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7656952 calcyclin binding protein isoform 1 [Homo sapiens] 452 e-127
gi|60218913 calcyclin binding protein isoform 2 [Homo sapiens] 374 e-104
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 55 5e-08
gi|5730041 suppressor of G2 allele of SKP1 isoform b [Homo sapiens] 55 5e-08
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap... 35 0.053
gi|4557509 cylicin 2 [Homo sapiens] 34 0.12
gi|12597655 centromere protein H [Homo sapiens] 34 0.12
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 33 0.20
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [... 32 0.34
gi|14149742 coiled-coil transcriptional coactivator isoform 1 [H... 32 0.34
gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Hom... 32 0.45
gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Hom... 32 0.45
gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Hom... 32 0.45
gi|154354979 myosin X [Homo sapiens] 32 0.59
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 32 0.59
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa... 32 0.59
gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni... 31 0.77
gi|113722133 senataxin [Homo sapiens] 31 1.00
gi|56788377 nucleoporin like 1 isoform b [Homo sapiens] 31 1.00
gi|30102928 nucleoporin like 1 isoform a [Homo sapiens] 31 1.00
gi|224591408 SH2 domain containing 4B isoform 2 [Homo sapiens] 31 1.00
gi|224591406 SH2 domain containing 4B isoform 1 [Homo sapiens] 31 1.00
gi|207113147 heat shock transcription factor 2 isoform b [Homo s... 30 1.3
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens] 30 1.3
gi|58530842 desmoplakin isoform II [Homo sapiens] 30 1.7
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 30 1.7
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 30 1.7
gi|84875541 cytochrome b5 reductase 4 [Homo sapiens] 30 1.7
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 30 1.7
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 30 1.7
>gi|7656952 calcyclin binding protein isoform 1 [Homo sapiens]
Length = 228
Score = 452 bits (1163), Expect = e-127
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKP 60
MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKP
Sbjct: 1 MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKP 60
Query: 61 AAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL 120
AAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL
Sbjct: 61 AAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL 120
Query: 121 NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPS 180
NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPS
Sbjct: 121 NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPS 180
Query: 181 YDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAKGDTEF 228
YDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAKGDTEF
Sbjct: 181 YDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAKGDTEF 228
>gi|60218913 calcyclin binding protein isoform 2 [Homo sapiens]
Length = 185
Score = 374 bits (961), Expect = e-104
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 44 MQQKSQKKAELLDNEKPAAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTEN 103
MQQKSQKKAELLDNEKPAAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTEN
Sbjct: 1 MQQKSQKKAELLDNEKPAAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTEN 60
Query: 104 VQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRW 163
VQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRW
Sbjct: 61 VQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRW 120
Query: 164 DYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAK 223
DYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAK
Sbjct: 121 DYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAK 180
Query: 224 GDTEF 228
GDTEF
Sbjct: 181 GDTEF 185
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 55.1 bits (131), Expect = 5e-08
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 38/170 (22%)
Query: 78 YGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPIS 137
Y W Q++ V I + + V + +V V F+E+ LVK +G+ Y++ + LL PI
Sbjct: 174 YDWYQTESQVVITLMIKNVQK---NDVNVEFSEKELSALVKLPSGEDYNLKL-ELLHPII 229
Query: 138 VEGSSKKVKTDTVLILCRKKVENTRWDYL------------------------------T 167
E S+ KV T + + KK E RW+ L
Sbjct: 230 PEQSTFKV-LSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWD 288
Query: 168 QVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVES 217
++ E KE+EK + + + L + ++IY DG D++KR +NK+++ES
Sbjct: 289 KLVGEIKEEEK---NEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMES 335
>gi|5730041 suppressor of G2 allele of SKP1 isoform b [Homo sapiens]
Length = 333
Score = 55.1 bits (131), Expect = 5e-08
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 38/170 (22%)
Query: 78 YGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPIS 137
Y W Q++ V I + + V + +V V F+E+ LVK +G+ Y++ + LL PI
Sbjct: 142 YDWYQTESQVVITLMIKNVQK---NDVNVEFSEKELSALVKLPSGEDYNLKL-ELLHPII 197
Query: 138 VEGSSKKVKTDTVLILCRKKVENTRWDYL------------------------------T 167
E S+ KV T + + KK E RW+ L
Sbjct: 198 PEQSTFKV-LSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWD 256
Query: 168 QVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVES 217
++ E KE+EK + + + L + ++IY DG D++KR +NK+++ES
Sbjct: 257 KLVGEIKEEEK---NEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMES 303
>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
sapiens]
Length = 796
Score = 35.0 bits (79), Expect = 0.053
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 122 GKSYSMIVNN---LLKPISVEGSSKKVKT----DTVLILCRKKVENTRWDYLTQVEKECK 174
G+S S++ + +LK I V+ + VK V++ R K+E D ++ E +
Sbjct: 561 GRSVSLVGEDERKMLKEI-VKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAE 619
Query: 175 EKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAK 223
EK E SE +N K++ E G + + + ++W +++E++ K
Sbjct: 620 EK-------EMQQSEAQINTAKRLLEKGKEAVVQEPERSWFQTKEERKK 661
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 33.9 bits (76), Expect = 0.12
Identities = 57/226 (25%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 8 KDLE---EVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNE-KPAAV 63
KD+E E K+ +K ++K +DA + S E+E + +K KK + N+ K +A
Sbjct: 145 KDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKGKDSAT 204
Query: 64 VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123
+ G T K S G S K I L V E+ + K+ N
Sbjct: 205 ESEGEKGGTEKDSKKGKKDSKKGKDSAIELQAVKA----------DEKKDEDGKKDANKG 254
Query: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKE------KE 177
S K I KK K D +KK +T D V+KE K+ K+
Sbjct: 255 DESKDAKKDAKEI------KKGKKD------KKKPSSTDSDSKDDVKKESKKDATKDAKK 302
Query: 178 KPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAK 223
DTE + ++ + K +D D K+ K + +K+ K
Sbjct: 303 VAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKKDEKKDAKKKGK 348
>gi|12597655 centromere protein H [Homo sapiens]
Length = 247
Score = 33.9 bits (76), Expect = 0.12
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 4 EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63
E+L+ ++EEVKV E L ++ ++ T +K +++ S++ + L+DN K
Sbjct: 83 EDLENEIEEVKVAFE-------IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLE 135
Query: 64 VAPITTGYTVKISNYGWDQSDKFVKI 89
+ + +K WD +K + I
Sbjct: 136 LNKL----IMKSQQESWDLEEKLLDI 157
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 33.1 bits (74), Expect = 0.20
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 4 EELQKDLEEVKVLLEKATRKR--VRDALTAEKSKIETEIKNKMQQKSQKKA--ELLDNEK 59
EEL++ EE ++ LE+ RK+ R EK K E E K K +++++KA ELL EK
Sbjct: 434 EELKRKAEEERLRLEEEARKQEEERKRQEEEKKKQEGEEKRKAGEEAKRKAEEELLLKEK 493
>gi|219521893 coiled-coil transcriptional coactivator isoform 2
[Homo sapiens]
Length = 606
Score = 32.3 bits (72), Expect = 0.34
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 5 ELQKDLEEV--KVLLEKATRKRVRD---ALTAEKSKIETEIKNKMQQKSQKKAEL 54
EL+ D++ + KVL ++ R+RD ALT E+ K+ ++K K Q +AEL
Sbjct: 199 ELEDDIQTISEKVLTKEVELDRLRDTVKALTREQEKLLGQLKEVQADKEQSEAEL 253
>gi|14149742 coiled-coil transcriptional coactivator isoform 1 [Homo
sapiens]
Length = 691
Score = 32.3 bits (72), Expect = 0.34
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 5 ELQKDLEEV--KVLLEKATRKRVRD---ALTAEKSKIETEIKNKMQQKSQKKAEL 54
EL+ D++ + KVL ++ R+RD ALT E+ K+ ++K K Q +AEL
Sbjct: 232 ELEDDIQTISEKVLTKEVELDRLRDTVKALTREQEKLLGQLKEVQADKEQSEAEL 286
>gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Homo
sapiens]
Length = 381
Score = 32.0 bits (71), Expect = 0.45
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 73 VKISNYGWDQSDKFVKIYITLTGV-----HQVPTEN-VQVHFTERSFDLLVKNLNGKSYS 126
+++S+Y W Q+ V + + L GV TEN ++V+F F+
Sbjct: 3 LQVSDYSWQQTKTAVFLSLPLKGVCVRDTDVFCTENYLKVNFPPFLFEAF---------- 52
Query: 127 MIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYL--TQVEKECKEK 176
L PI E S K+ DT++ KK E W+ L T V+KE ++
Sbjct: 53 -----LYAPIDDESSKAKIGNDTIVFTLYKK-EAAMWETLSVTGVDKEMMQR 98
>gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Homo
sapiens]
Length = 376
Score = 32.0 bits (71), Expect = 0.45
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 73 VKISNYGWDQSDKFVKIYITLTGV-----HQVPTEN-VQVHFTERSFDLLVKNLNGKSYS 126
+++S+Y W Q+ V + + L GV TEN ++V+F F+
Sbjct: 3 LQVSDYSWQQTKTAVFLSLPLKGVCVRDTDVFCTENYLKVNFPPFLFEAF---------- 52
Query: 127 MIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYL--TQVEKECKEK 176
L PI E S K+ DT++ KK E W+ L T V+KE ++
Sbjct: 53 -----LYAPIDDESSKAKIGNDTIVFTLYKK-EAAMWETLSVTGVDKEMMQR 98
>gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Homo
sapiens]
Length = 420
Score = 32.0 bits (71), Expect = 0.45
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 73 VKISNYGWDQSDKFVKIYITLTGV-----HQVPTEN-VQVHFTERSFDLLVKNLNGKSYS 126
+++S+Y W Q+ V + + L GV TEN ++V+F F+
Sbjct: 3 LQVSDYSWQQTKTAVFLSLPLKGVCVRDTDVFCTENYLKVNFPPFLFEAF---------- 52
Query: 127 MIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYL--TQVEKECKEK 176
L PI E S K+ DT++ KK E W+ L T V+KE ++
Sbjct: 53 -----LYAPIDDESSKAKIGNDTIVFTLYKK-EAAMWETLSVTGVDKEMMQR 98
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 31.6 bits (70), Expect = 0.59
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 4 EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQ-----QKSQKKAEL 54
EE +K EE K E+ R+R R+ AE + E K Q QKSQK+AEL
Sbjct: 819 EEKKKQEEEEKKKREEEERERERERREAELRAQQEEETRKQQELEALQKSQKEAEL 874
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 31.6 bits (70), Expect = 0.59
Identities = 16/60 (26%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQ-KKAELLDNEK 59
MA+EE +K E++K++ ++ KR++ ++ + + ++ K ++K + A+LL+ EK
Sbjct: 926 MAAEEKRKQKEQIKIMKQQEKIKRIQQIRMEKELRAQQILEAKKKKKEEAANAKLLEAEK 985
>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
sapiens]
Length = 641
Score = 31.6 bits (70), Expect = 0.59
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 29/223 (13%)
Query: 17 LEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV--VAPITTGYTVK 74
LEK+ K + + A+ + I+ + +N Q +S+ K L+ ++ V V T T K
Sbjct: 265 LEKSNTKLIEELAIAKNNIIKLQEENH-QLRSENKLILMKTQQHLEVTKVDVETELQTYK 323
Query: 75 ISNYGWDQSDKFVKIYITLTGVHQVPTEN---VQV---HFTERSFDLLVKNLNGKSYSMI 128
S G D+ + + + EN VQV H E + LL K+++ K ++I
Sbjct: 324 HSRQGLDEMYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEKDIHEKQDTLI 383
Query: 129 VNNL----LKPISVE------GSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEK 178
+K I++E GS +K +I ++ N + Q+E+ ++ EK
Sbjct: 384 GLRQQLEEVKAINIEMYQKLQGSEDGLKEKNEIIARLEEKTNKITAAMRQLEQRLQQAEK 443
Query: 179 PSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQ 221
+ E + + L L K D +++ I++ +EKQ
Sbjct: 444 AQMEAEDEDEKYLQECLSK-----SDSLQKQISQ-----KEKQ 476
>gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit 9A
[Homo sapiens]
Length = 1098
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/49 (28%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 6 LQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAEL 54
++K L+E+K+ LEKA ++ ++ + ++ K+ + + +MQ+KS+K ++
Sbjct: 1041 VKKKLKEMKMSLEKA--RKAQEKMEKQREKLRRKEQEQMQRKSKKTEKM 1087
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 30.8 bits (68), Expect = 1.00
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 118 KNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILC--RKKVENTRWDYLTQVEKECKE 175
K + G Y ++ N K S E S+ K+K + VL+ V+ + + +++CK+
Sbjct: 1971 KTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKD 2030
Query: 176 KEKP 179
K+ P
Sbjct: 2031 KKNP 2034
>gi|56788377 nucleoporin like 1 isoform b [Homo sapiens]
Length = 587
Score = 30.8 bits (68), Expect = 1.00
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 5 ELQKDLEEVKVLLEKATRKRVRDALTAEKSKIET--EIKN-KMQQKSQKKAELLDNE--K 59
++Q+D++ +K LL A R+ L +K KIET E+KN ++ ++QK L +E
Sbjct: 270 KVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYAA 329
Query: 60 PAAVVAPITTGYTVKISNY 78
PA + + V++ Y
Sbjct: 330 PADYFRILVQQFEVQLQQY 348
>gi|30102928 nucleoporin like 1 isoform a [Homo sapiens]
Length = 599
Score = 30.8 bits (68), Expect = 1.00
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 5 ELQKDLEEVKVLLEKATRKRVRDALTAEKSKIET--EIKN-KMQQKSQKKAELLDNE--K 59
++Q+D++ +K LL A R+ L +K KIET E+KN ++ ++QK L +E
Sbjct: 282 KVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYAA 341
Query: 60 PAAVVAPITTGYTVKISNY 78
PA + + V++ Y
Sbjct: 342 PADYFRILVQQFEVQLQQY 360
>gi|224591408 SH2 domain containing 4B isoform 2 [Homo sapiens]
Length = 309
Score = 30.8 bits (68), Expect = 1.00
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 5 ELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLD 56
+ Q++ EE+ E K+ RDAL EK++I E K K++ + +K A++L+
Sbjct: 58 QAQREAEELWRQKEAEITKKFRDALANEKARILAE-KWKVEMEDRKAAKVLE 108
>gi|224591406 SH2 domain containing 4B isoform 1 [Homo sapiens]
Length = 357
Score = 30.8 bits (68), Expect = 1.00
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 5 ELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLD 56
+ Q++ EE+ E K+ RDAL EK++I E K K++ + +K A++L+
Sbjct: 107 QAQREAEELWRQKEAEITKKFRDALANEKARILAE-KWKVEMEDRKAAKVLE 157
>gi|207113147 heat shock transcription factor 2 isoform b [Homo
sapiens]
Length = 518
Score = 30.4 bits (67), Expect = 1.3
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 ENVQVHFTERSF----DLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLI 152
E+ Q + R F DLLV + N K NN+++P+S EG K K D LI
Sbjct: 372 EDFQAMLSGRQFSIDPDLLVDSEN-KGLETTKNNVVQPVSEEGRKSKSKPDKQLI 425
>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
Length = 4265
Score = 30.4 bits (67), Expect = 1.3
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 5 ELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEK 59
++Q+DLE + LLE+A + + LT E+ K++T I + + Q + E+ NEK
Sbjct: 2848 KMQEDLESMHPLLEEAAKDTM---LTMEQIKVDTAIAEETRNSVQTE-EIKANEK 2898
>gi|58530842 desmoplakin isoform II [Homo sapiens]
Length = 2272
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 2 ASEELQKDLEEVKVLL-EKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELL 55
A +E + ++E ++VLL E+ TRKR + A+ S E KN+ Q Q++ LL
Sbjct: 1163 AIKEKEYEIERLRVLLQEEGTRKREYENELAKASNRIQESKNQCTQVVQERESLL 1217
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 1 MASEELQKDLEEVKV------LLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAEL 54
M ++ LQK+LEE+K+ LEK + ++ EK K + E +NK + +++AE+
Sbjct: 791 MENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENK---RLRQQAEI 847
Query: 55 LD 56
D
Sbjct: 848 KD 849
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 1 MASEELQKDLEEVKV------LLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAEL 54
M ++ LQK+LEE+K+ LEK + ++ EK K + E +NK + +++AE+
Sbjct: 791 MENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENK---RLRQQAEI 847
Query: 55 LD 56
D
Sbjct: 848 KD 849
>gi|84875541 cytochrome b5 reductase 4 [Homo sapiens]
Length = 521
Score = 30.0 bits (66), Expect = 1.7
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 22 RKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYTVKISNYGWD 81
R ++ A+ + + E ++ N M KSQ + L E P+ +Y W
Sbjct: 128 RMAIKPAVLKDYREEEKKVLNGMLPKSQV-TDTLAKEGPS-------------YPSYDWF 173
Query: 82 QSDKFVKIYITLTGVHQVPTENVQVHFTERSF--DLLVKNLNGKSYSMIVNNLLKPISVE 139
Q+D V I I T + +++ V SF + ++K+ + + + + + SV
Sbjct: 174 QTDSLVTIAI-YTKQKDINLDSIIVDHQNDSFRAETIIKDCLYLIHIGLSHEVQEDFSVR 232
Query: 140 GSSKKVKTDTVLILCRKKVENTRWDYL 166
K + VL +K ENT WD+L
Sbjct: 233 VVESVGKIEIVL----QKKENTSWDFL 255
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 30.0 bits (66), Expect = 1.7
Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 34/243 (13%)
Query: 4 EELQKDLEEVKVLLEKATRKR------VRDALTAEKSKIETEIKNKMQQKSQKKAELLDN 57
E+L+ ++ +K LE +R + L K +++TE + K ELL N
Sbjct: 842 EKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTK-----ELLKN 896
Query: 58 -EKPAAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLL 116
+K A + + V++++ ++ K + V Q+ TE + L
Sbjct: 897 AQKEIATLKQHLSNMEVQVASQSSQRTGKGQP-----SNKEDVDDLVSQLRQTEEQVNDL 951
Query: 117 VKNL-----NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEK 171
+ L N + Y +V +L + ++ E + + + ++ E + TQ+EK
Sbjct: 952 KERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAE-----FQTQLEK 1006
Query: 172 ECKEKEKPSYDTETDPSEGL------MNVLKKIYEDGDDDMKRTINKAWVE-SREKQAKG 224
+ E EK + + D + ++ LKK ++++ + +A S E+QA+
Sbjct: 1007 KLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARR 1066
Query: 225 DTE 227
D +
Sbjct: 1067 DCQ 1069
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 30.0 bits (66), Expect = 1.7
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 5 ELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPA 61
E+Q LEE + LE K +R + E S+++ E+ K+ +K ++ A L N + A
Sbjct: 1588 EIQAALEEAEGALELEETKTLR--IQLELSQVKAEVDRKLAEKDEECANLRRNHQRA 1642
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,849,176
Number of Sequences: 37866
Number of extensions: 330979
Number of successful extensions: 1633
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1578
Number of HSP's gapped (non-prelim): 117
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.