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Search of human proteins with 7524354
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7524354 dimethylarginine dimethylaminohydrolase 2 [Homo
sapiens]
(285 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7524354 dimethylarginine dimethylaminohydrolase 2 [Homo sapiens] 570 e-163
gi|6912328 dimethylarginine dimethylaminohydrolase 1 isoform 1 [... 267 7e-72
gi|197313763 dimethylarginine dimethylaminohydrolase 1 isoform 2... 188 4e-48
gi|169173216 PREDICTED: similar to GDNF family receptor alpha 2 ... 31 1.4
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 30 1.9
gi|115392150 hypothetical protein LOC644815 [Homo sapiens] 30 2.4
gi|47086439 amelotin [Homo sapiens] 30 2.4
gi|14249622 ajuba isoform 1 [Homo sapiens] 30 3.2
gi|239749872 PREDICTED: hypothetical protein [Homo sapiens] 29 4.1
gi|239744174 PREDICTED: hypothetical protein XP_002343068 [Homo ... 29 4.1
gi|41281805 regulator of G-protein signaling 20 isoform a [Homo ... 29 5.4
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 29 5.4
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 29 5.4
gi|13435397 PHD finger protein 1 isoform b [Homo sapiens] 28 7.0
gi|7662068 protocadherin alpha 9 isoform 2 precursor [Homo sapiens] 28 7.0
gi|14165425 protocadherin alpha 9 isoform 1 precursor [Homo sapi... 28 7.0
gi|239754289 PREDICTED: hypothetical protein [Homo sapiens] 28 9.2
gi|239748826 PREDICTED: hypothetical protein XP_002346831 [Homo ... 28 9.2
gi|239742857 PREDICTED: hypothetical protein XP_002342664 [Homo ... 28 9.2
gi|239740873 PREDICTED: hypothetical protein XP_002344073 [Homo ... 28 9.2
gi|239740807 PREDICTED: hypothetical protein [Homo sapiens] 28 9.2
gi|239740757 PREDICTED: hypothetical protein [Homo sapiens] 28 9.2
gi|239740703 PREDICTED: hypothetical protein [Homo sapiens] 28 9.2
gi|239513965 PREDICTED: hypothetical protein [Homo sapiens] 28 9.2
gi|71164875 phosphodiesterase 8B isoform 2 [Homo sapiens] 28 9.2
gi|71164873 phosphodiesterase 8B isoform 4 [Homo sapiens] 28 9.2
gi|71164869 phosphodiesterase 8B isoform 5 [Homo sapiens] 28 9.2
gi|71164867 phosphodiesterase 8B isoform 3 [Homo sapiens] 28 9.2
gi|26006851 phosphodiesterase 8B isoform 1 [Homo sapiens] 28 9.2
gi|13129124 caspase recruitment domain protein 14 isoform 1 [Hom... 28 9.2
>gi|7524354 dimethylarginine dimethylaminohydrolase 2 [Homo sapiens]
Length = 285
Score = 570 bits (1469), Expect = e-163
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQL 60
MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQL
Sbjct: 1 MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQL 60
Query: 61 LELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEIGDE 120
LELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEIGDE
Sbjct: 61 LELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEIGDE 120
Query: 121 NATLDGTDVLFTGREFFVGLSKWTNHRGAEIVADTFRDFAVSTVPVSGPSHLRGLCGMGG 180
NATLDGTDVLFTGREFFVGLSKWTNHRGAEIVADTFRDFAVSTVPVSGPSHLRGLCGMGG
Sbjct: 121 NATLDGTDVLFTGREFFVGLSKWTNHRGAEIVADTFRDFAVSTVPVSGPSHLRGLCGMGG 180
Query: 181 PRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLFLRPGLPGVPPFLLHRGGG 240
PRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLFLRPGLPGVPPFLLHRGGG
Sbjct: 181 PRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLFLRPGLPGVPPFLLHRGGG 240
Query: 241 DLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVLSTRPHS 285
DLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVLSTRPHS
Sbjct: 241 DLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVLSTRPHS 285
>gi|6912328 dimethylarginine dimethylaminohydrolase 1 isoform 1
[Homo sapiens]
Length = 285
Score = 267 bits (683), Expect = 7e-72
Identities = 145/279 (51%), Positives = 192/279 (68%), Gaps = 4/279 (1%)
Query: 1 MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQL 60
+G P GR +HA++R +PESL A +D+A+A+R+H + G L +LGLQ+
Sbjct: 4 LGHPA-AFGRATHAVVRALPESLGQHALRSAKGEEVDVARAERQHQLYVGVLGSKLGLQV 62
Query: 61 LELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEIGDE 120
+ELP +ESLP + D AV+ +TALITRP +P+RR EVD +++AL+ L L IVE+ DE
Sbjct: 63 VELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDE 122
Query: 121 NATLDGTDVLFTGREFFVGLSKWTNHRGAEIVADTFRDFAVSTVPVSGPSHLRGLCGMGG 180
NATLDG DVLFTGREFFVGLSK TN RGAEI+ADTF+D+AVSTVPV+ HL+ C M G
Sbjct: 123 NATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCSMAG 182
Query: 181 PRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLFLRPGLPGVPPFLLHRGGG 240
P + GSS++AQKA++ M ++DH Y LT+PDD AA+C++L +P LLHR
Sbjct: 183 PNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYL--NIPNKGHVLLHRTPE 240
Query: 241 DLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVL 279
+ P S + +KL D L+PVS SELEK GL + C VL
Sbjct: 241 EYPESAKVYEKLKDHMLIPVSMSELEKVD-GLLTCCSVL 278
>gi|197313763 dimethylarginine dimethylaminohydrolase 1 isoform 2
[Homo sapiens]
Length = 182
Score = 188 bits (478), Expect = 4e-48
Identities = 99/177 (55%), Positives = 126/177 (71%), Gaps = 3/177 (1%)
Query: 103 VRKALQDLGLRIVEIGDENATLDGTDVLFTGREFFVGLSKWTNHRGAEIVADTFRDFAVS 162
+++AL+ L L IVE+ DENATLDG DVLFTGREFFVGLSK TN RGAEI+ADTF+D+AVS
Sbjct: 2 MKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAVS 61
Query: 163 TVPVSGPSHLRGLCGMGGPRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLF 222
TVPV+ HL+ C M GP + GSS++AQKA++ M ++DH Y LT+PDD AA+C++
Sbjct: 62 TVPVADGLHLKSFCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAANCIY 121
Query: 223 LRPGLPGVPPFLLHRGGGDLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVL 279
L +P LLHR + P S + +KL D L+PVS SELEK GL + C VL
Sbjct: 122 L--NIPNKGHVLLHRTPEEYPESAKVYEKLKDHMLIPVSMSELEKVD-GLLTCCSVL 175
>gi|169173216 PREDICTED: similar to GDNF family receptor alpha 2
[Homo sapiens]
Length = 364
Score = 30.8 bits (68), Expect = 1.4
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 48 LGGKLRQRLGLQLLELPPEESLPLGPLLGDTAVIQGDTALI 88
L G R L + PP E+L LGP GD A +Q AL+
Sbjct: 221 LWGLCRSLLIASVDSAPPREALGLGPEAGDPAFVQAPPALL 261
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 30.4 bits (67), Expect = 1.9
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 225 PGLPGVPPFLLHRGGGDLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVLSTRP 283
PGLPG+PP LL G P+S + S+ TL P L + SS L LS+ P
Sbjct: 3054 PGLPGLPPVLLPGMNG--PSSLPGFPQNSN-TLTPPGAGMLGFPTSATSSPALSLSSAP 3109
>gi|115392150 hypothetical protein LOC644815 [Homo sapiens]
Length = 823
Score = 30.0 bits (66), Expect = 2.4
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 64 PPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEIGDENAT 123
PPE S P + + + QGD + P P D + + D+G ++E+ E A
Sbjct: 477 PPEPSAPQDGVPAENGLPQGDPEPLPPVPKPRTVPVADVLARDSSDIGW-VLELPKEEAP 535
Query: 124 LDGTD 128
+GTD
Sbjct: 536 QNGTD 540
>gi|47086439 amelotin [Homo sapiens]
Length = 209
Score = 30.0 bits (66), Expect = 2.4
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 223 LRPGLPGVPPFLLHRGGGDLPNSQEALQKLSDVTLVPVS 261
L+P L G+PP L G LPN Q++ Q ++L+P++
Sbjct: 20 LKPAL-GLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLT 57
>gi|14249622 ajuba isoform 1 [Homo sapiens]
Length = 538
Score = 29.6 bits (65), Expect = 3.2
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 2 GTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQLL 61
GTPG G GR S G+ SG G P + + RE G L + QR +
Sbjct: 29 GTPGPGKGRLS-----GLGGPRKSGPRGATGGPGDEPLEPAREQGSLDAERNQRGSFEAP 83
Query: 62 ELPPEESLPLGP 73
E S P GP
Sbjct: 84 RY--EGSFPAGP 93
>gi|239749872 PREDICTED: hypothetical protein [Homo sapiens]
Length = 125
Score = 29.3 bits (64), Expect = 4.1
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 16 IRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQLLELPP 65
+ G P L+ E GAG +L LA A + G G+LR GL++ + P
Sbjct: 50 LAGHPRRLSEKERRGAGPGSLGLAGAGQPRGPGRGRLRPGRGLRVFDGAP 99
>gi|239744174 PREDICTED: hypothetical protein XP_002343068 [Homo
sapiens]
Length = 125
Score = 29.3 bits (64), Expect = 4.1
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 16 IRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQLLELPP 65
+ G P L+ E GAG +L LA A + G G+LR GL++ + P
Sbjct: 50 LAGHPRRLSEKERRGAGPGSLGLAGAGQPRGPGRGRLRPGRGLRVFDGAP 99
>gi|41281805 regulator of G-protein signaling 20 isoform a [Homo
sapiens]
Length = 388
Score = 28.9 bits (63), Expect = 5.4
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 1 MGTPGEGLGRC-SHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQ 59
+ +P L R SH L R PE+ LPAL A+ R H L G+L LG
Sbjct: 75 LSSPLSSLARFFSHLLRRPPPEAPRRRLDFSPLLPALPAARLSRGHEELPGRLSLLLGAA 134
Query: 60 L-LELPPEESLPLGP 73
L L P PL P
Sbjct: 135 LALPGRPSGGRPLRP 149
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 28.9 bits (63), Expect = 5.4
Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 17/99 (17%)
Query: 181 PRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLFLRPGLPGVPPFLLHRGGG 240
P T V+G D Q + LT P LP D RP P PP
Sbjct: 1224 PSTPVSGQDDLIQHQDMRILELTPEPDRPRILPPDQ-------RPPEPPEPP-------- 1268
Query: 241 DLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVL 279
P ++E L ++ VP + S L AG+ + L L
Sbjct: 1269 --PVTEEDLDYRTENQHVPTTSSSLTDPHAGVKAALLQL 1305
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 28.9 bits (63), Expect = 5.4
Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 17/99 (17%)
Query: 181 PRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLFLRPGLPGVPPFLLHRGGG 240
P T V+G D Q + LT P LP D RP P PP
Sbjct: 1164 PSTPVSGQDDLIQHQDMRILELTPEPDRPRILPPDQ-------RPPEPPEPP-------- 1208
Query: 241 DLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVL 279
P ++E L ++ VP + S L AG+ + L L
Sbjct: 1209 --PVTEEDLDYRTENQHVPTTSSSLTDPHAGVKAALLQL 1245
>gi|13435397 PHD finger protein 1 isoform b [Homo sapiens]
Length = 567
Score = 28.5 bits (62), Expect = 7.0
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 14 ALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQLLE--LPPEESLPL 71
+L+ G GE + L AL+ + ++ + G ++++R L L +PP P+
Sbjct: 287 SLLLGELSDTPKGERSSKLLSALN---SHKDRFISGREIKKRKCLFGLHARMPP----PV 339
Query: 72 GPLLGDTAVI-----QGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEIGDENA 122
P GD A+ QG ++RP RRPE + +R+ + ++ E+G +A
Sbjct: 340 EPPTGDGALTSFPSGQGPGGGVSRPLGKRRRPEPEPLRRRQKG---KVEELGPPSA 392
>gi|7662068 protocadherin alpha 9 isoform 2 precursor [Homo
sapiens]
Length = 842
Score = 28.5 bits (62), Expect = 7.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 42 QREHGVLGGKLRQRLGLQLLELPP 65
+ EHG G++ Q LGL+L EL P
Sbjct: 38 EAEHGTFVGRIAQDLGLELAELVP 61
>gi|14165425 protocadherin alpha 9 isoform 1 precursor [Homo
sapiens]
Length = 950
Score = 28.5 bits (62), Expect = 7.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 42 QREHGVLGGKLRQRLGLQLLELPP 65
+ EHG G++ Q LGL+L EL P
Sbjct: 38 EAEHGTFVGRIAQDLGLELAELVP 61
>gi|239754289 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 28.1 bits (61), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 53 RQRLGLQLLELPPEESLPLGP 73
R+RLGLQ LPP L LGP
Sbjct: 47 RRRLGLQPFALPPPPRLSLGP 67
>gi|239748826 PREDICTED: hypothetical protein XP_002346831 [Homo
sapiens]
Length = 178
Score = 28.1 bits (61), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 53 RQRLGLQLLELPPEESLPLGP 73
R+RLGLQ LPP L LGP
Sbjct: 47 RRRLGLQPFALPPPPRLSLGP 67
>gi|239742857 PREDICTED: hypothetical protein XP_002342664 [Homo
sapiens]
Length = 178
Score = 28.1 bits (61), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 53 RQRLGLQLLELPPEESLPLGP 73
R+RLGLQ LPP L LGP
Sbjct: 47 RRRLGLQPFALPPPPRLSLGP 67
>gi|239740873 PREDICTED: hypothetical protein XP_002344073 [Homo
sapiens]
Length = 178
Score = 28.1 bits (61), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 53 RQRLGLQLLELPPEESLPLGP 73
R+RLGLQ LPP L LGP
Sbjct: 47 RRRLGLQPFALPPPPRLSLGP 67
>gi|239740807 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 28.1 bits (61), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 53 RQRLGLQLLELPPEESLPLGP 73
R+RLGLQ LPP L LGP
Sbjct: 47 RRRLGLQPFALPPPPRLSLGP 67
>gi|239740757 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 28.1 bits (61), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 53 RQRLGLQLLELPPEESLPLGP 73
R+RLGLQ LPP L LGP
Sbjct: 47 RRRLGLQPFALPPPPRLSLGP 67
>gi|239740703 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 28.1 bits (61), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 53 RQRLGLQLLELPPEESLPLGP 73
R+RLGLQ LPP L LGP
Sbjct: 47 RRRLGLQPFALPPPPRLSLGP 67
>gi|239513965 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 28.1 bits (61), Expect = 9.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 53 RQRLGLQLLELPPEESLPLGP 73
R+RLGLQ LPP L LGP
Sbjct: 47 RRRLGLQPFALPPPPRLSLGP 67
>gi|71164875 phosphodiesterase 8B isoform 2 [Homo sapiens]
Length = 838
Score = 28.1 bits (61), Expect = 9.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 4 PGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREH 45
P G S A +R L SG AG+ PA ++ +R H
Sbjct: 55 PSRASGPPSVARVRRARTELGSGSSAGSAAPAATTSRGRRRH 96
>gi|71164873 phosphodiesterase 8B isoform 4 [Homo sapiens]
Length = 865
Score = 28.1 bits (61), Expect = 9.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 4 PGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREH 45
P G S A +R L SG AG+ PA ++ +R H
Sbjct: 55 PSRASGPPSVARVRRARTELGSGSSAGSAAPAATTSRGRRRH 96
>gi|71164869 phosphodiesterase 8B isoform 5 [Homo sapiens]
Length = 830
Score = 28.1 bits (61), Expect = 9.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 4 PGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREH 45
P G S A +R L SG AG+ PA ++ +R H
Sbjct: 55 PSRASGPPSVARVRRARTELGSGSSAGSAAPAATTSRGRRRH 96
>gi|71164867 phosphodiesterase 8B isoform 3 [Homo sapiens]
Length = 788
Score = 28.1 bits (61), Expect = 9.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 4 PGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREH 45
P G S A +R L SG AG+ PA ++ +R H
Sbjct: 55 PSRASGPPSVARVRRARTELGSGSSAGSAAPAATTSRGRRRH 96
>gi|26006851 phosphodiesterase 8B isoform 1 [Homo sapiens]
Length = 885
Score = 28.1 bits (61), Expect = 9.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 4 PGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREH 45
P G S A +R L SG AG+ PA ++ +R H
Sbjct: 55 PSRASGPPSVARVRRARTELGSGSSAGSAAPAATTSRGRRRH 96
>gi|13129124 caspase recruitment domain protein 14 isoform 1 [Homo
sapiens]
Length = 1004
Score = 28.1 bits (61), Expect = 9.2
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 22/139 (15%)
Query: 46 GVLGGKLRQRLGLQLLELPPEESLPLGPLLGDTAVIQGDTALITRP---WSPARRPEVDG 102
G ++ R G Q++ + E S PL + + ++ L+ R + + DG
Sbjct: 601 GSAADQMALRPGTQIVMVDYEASEPLFKAVLEDTTLEEAVGLLRRVDGFCCLSVKVNTDG 660
Query: 103 VRKALQDLGLRIVEIGDE-----NATLDG----------TDVLFTGREFFVGLSKWTNHR 147
++ LQDL ++ GD N ++G +VL F G W HR
Sbjct: 661 YKRLLQDLEAKVATSGDSFYIRVNLAMEGRAKGELQVHCNEVLHVTDTMFQGCGCWHAHR 720
Query: 148 GAEIVADTFRDFAV-STVP 165
+ + T +D A T+P
Sbjct: 721 ---VNSYTMKDTAAHGTIP 736
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,595,979
Number of Sequences: 37866
Number of extensions: 624774
Number of successful extensions: 1700
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1673
Number of HSP's gapped (non-prelim): 33
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.