Guide to the Human Genome
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Search of human proteins with 74315997

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
         (364 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]           761   0.0  
gi|74315995 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]           761   0.0  
gi|239757875 PREDICTED: similar to L-myc-2 protein, partial [Hom...   423   e-118
gi|20127386 l-myc-1 proto-oncogene isoform 2 [Homo sapiens]           366   e-101
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro...   156   3e-38
gi|71774083 myc proto-oncogene protein [Homo sapiens]                 153   3e-37
gi|21704263 MAX protein isoform b [Homo sapiens]                       52   6e-07
gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens]       52   6e-07
gi|13775222 MAX dimerization protein 3 isoform a [Homo sapiens]        52   6e-07
gi|21704269 MAX protein isoform e [Homo sapiens]                       50   2e-06
gi|21704265 MAX protein isoform c [Homo sapiens]                       50   2e-06
gi|21704261 MAX protein isoform a [Homo sapiens]                       50   2e-06
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]       47   3e-05
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]       47   3e-05
gi|47717116 MAX interactor 1 isoform b [Homo sapiens]                  45   1e-04
gi|30795242 aryl hydrocarbon receptor nuclear translocator isofo...    44   2e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    44   2e-04
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo...    43   4e-04
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor...    43   4e-04
gi|148806928 hypothetical protein LOC57482 [Homo sapiens]              43   4e-04
gi|237512940 early growth response 4 [Homo sapiens]                    42   7e-04
gi|145199237 transcription elongation factor B polypeptide 3 bin...    42   7e-04
gi|57242782 MAX interactor 1 isoform a [Homo sapiens]                  42   0.001
gi|9945318 MAX binding protein [Homo sapiens]                          42   0.001
gi|52630419 sterol regulatory element binding transcription fact...    41   0.002
gi|22547195 sterol regulatory element binding transcription fact...    41   0.002
gi|68303555 aryl hydrocarbon receptor nuclear translocator 2 [Ho...    41   0.002
gi|98986461 neurogenic differentiation 2 [Homo sapiens]                40   0.003
gi|153792074 proline rich 12 [Homo sapiens]                            40   0.003
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ...    40   0.003

>gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
          Length = 364

 Score =  761 bits (1964), Expect = 0.0
 Identities = 364/364 (100%), Positives = 364/364 (100%)

Query: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60
           MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP
Sbjct: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60

Query: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120
           PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG
Sbjct: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120

Query: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS 180
           NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS
Sbjct: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS 180

Query: 181 LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER 240
           LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER
Sbjct: 181 LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER 240

Query: 241 DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSR 300
           DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSR
Sbjct: 241 DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSR 300

Query: 301 FLALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAY 360
           FLALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAY
Sbjct: 301 FLALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAY 360

Query: 361 LTGY 364
           LTGY
Sbjct: 361 LTGY 364


>gi|74315995 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
          Length = 364

 Score =  761 bits (1964), Expect = 0.0
 Identities = 364/364 (100%), Positives = 364/364 (100%)

Query: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60
           MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP
Sbjct: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60

Query: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120
           PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG
Sbjct: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120

Query: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS 180
           NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS
Sbjct: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS 180

Query: 181 LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER 240
           LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER
Sbjct: 181 LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER 240

Query: 241 DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSR 300
           DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSR
Sbjct: 241 DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSR 300

Query: 301 FLALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAY 360
           FLALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAY
Sbjct: 301 FLALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAY 360

Query: 361 LTGY 364
           LTGY
Sbjct: 361 LTGY 364


>gi|239757875 PREDICTED: similar to L-myc-2 protein, partial [Homo
           sapiens]
          Length = 349

 Score =  423 bits (1087), Expect = e-118
 Identities = 213/296 (71%), Positives = 229/296 (77%), Gaps = 6/296 (2%)

Query: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60
           MD DSY HYFYDYD GEDFYRST PSEDIWKKFELVP     PPW LGP AG+PA   G 
Sbjct: 60  MDRDSYHHYFYDYDGGEDFYRSTTPSEDIWKKFELVP-----PPWDLGPAAGNPALSFGL 114

Query: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120
            EPWP GC GDE ES+ + K W  NYAS+IRRDCMWSGFS +E LERAVSD LA GAP G
Sbjct: 115 LEPWPVGCAGDETESQDYWKAWDANYASLIRRDCMWSGFSTQEPLERAVSDLLAVGAPSG 174

Query: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS 180
             PK  A PD TP LEAGN AP  PC LGEPK QACS SESPSDSE EEID VTV+KRQS
Sbjct: 175 YSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEID-VTVKKRQS 233

Query: 181 LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER 240
           L  RKPV I VRAD LDP M  FHISIHQQQHNYAA FPPESC QE A +R P +E LER
Sbjct: 234 LSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPPKEALER 293

Query: 241 DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRND 296
           +A G K+D+EDEEIVS PPVESEAAQSC PKP+  DTE+ TK+K H++LERKRRND
Sbjct: 294 EAPGGKDDKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRND 349


>gi|20127386 l-myc-1 proto-oncogene isoform 2 [Homo sapiens]
          Length = 206

 Score =  366 bits (940), Expect = e-101
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60
           MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP
Sbjct: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60

Query: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120
           PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG
Sbjct: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120

Query: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDS 165
           NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDS
Sbjct: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDS 165


>gi|19923312 v-myc myelocytomatosis viral related oncogene,
           neuroblastoma derived [Homo sapiens]
          Length = 464

 Score =  156 bits (394), Expect = 3e-38
 Identities = 161/472 (34%), Positives = 204/472 (43%), Gaps = 142/472 (30%)

Query: 1   MDYDSYQHYFYDYDCGEDFY----RSTAPSEDIWKKFELVPSPPTS------------PP 44
           +++DS Q  FY  +  +DFY     ST P EDIWKKFEL+P+PP S            P 
Sbjct: 19  LEFDSLQPCFYPDE--DDFYFGGPDSTPPGEDIWKKFELLPTPPLSPSRGFAEHSSEPPS 76

Query: 45  W--------------------GLGPGAGDPAP---------------------------- 56
           W                    GLG G G   P                            
Sbjct: 77  WVTEMLLENELWGSPAEEDAFGLG-GLGGLTPNPVILQDCMWSGFSAREKLERAVSEKLQ 135

Query: 57  -GIGPPEPW-----PG-GCTGDEAESRGHSKGWGRNYASIIRR------DCMWSG----F 99
            G GPP        PG G         G + G GR  A++         +C+       F
Sbjct: 136 HGRGPPTAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVDPAVVFPF 195

Query: 100 SARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLG------EPKT 153
              +R E A        AP   P  AS A    P   AG P  A P P G      + K 
Sbjct: 196 PVNKR-EPAPVPAAPASAPAAGPAVASGAGIAAP---AGAPGVAPPRPGGRQTSGGDHKA 251

Query: 154 QACSGSESPSDS---------ENEEIDVVTVEKRQSLGIRKPVT---ITVR--------- 192
            + SG ++ SDS         E EEIDVVTVEKR+S    K VT   ITVR         
Sbjct: 252 LSTSGEDTLSDSDDEDDEEEDEEEEIDVVTVEKRRSSSNTKAVTTFTITVRPKNAALGPG 311

Query: 193 -ADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDEED 251
            A   +  +K   + IHQQ HNYAA  P         SE  P ++ ++ +A         
Sbjct: 312 RAQSSELILKRC-LPIHQQ-HNYAAPSPYVE------SEDAPPQKKIKSEA--------- 354

Query: 252 EEIVSPPPVES---EAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQV 308
               SP P++S     A+S  P+  +SD+ED  +R+NHN LER+RRNDLRS FL LRD V
Sbjct: 355 ----SPRPLKSVIPPKAKSLSPR--NSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHV 408

Query: 309 PTLASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAY 360
           P L    KA KVVIL KA EY+ +L   E ++  EK +L+ RQQQL K+I +
Sbjct: 409 PELVKNEKAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIEH 460


>gi|71774083 myc proto-oncogene protein [Homo sapiens]
          Length = 454

 Score =  153 bits (386), Expect = 3e-37
 Identities = 145/447 (32%), Positives = 201/447 (44%), Gaps = 112/447 (25%)

Query: 1   MDYDSYQHYFYDYDCGEDFYRST--------APSEDIWKKFELVPSPPTSPPWGLG---P 49
           +DYDS Q YFY  D  E+FY+          APSEDIWKKFEL+P+PP SP    G   P
Sbjct: 29  LDYDSVQPYFY-CDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTPPLSPSRRSGLCSP 87

Query: 50  GAGDPAPGIGPPEPWPGG---CTGDEAESRGHSKGWGRNYAS-------------IIRRD 93
                 P     +   GG    T D+ E      G      S             II +D
Sbjct: 88  SYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDETFIKNIIIQD 147

Query: 94  CMWSGFSARERL--------ERAVSDRLAPGAPRGN------------------------ 121
           CMWSGFSA  +L        + A  D  +P   RG+                        
Sbjct: 148 CMWSGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPS 207

Query: 122 -----PPKASAAPDCTPSLEAGNPAPAAPC--------PLGEPK-------TQACSGSES 161
                P   S++P    S ++   +P++          P G P+       T   + S+S
Sbjct: 208 VVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDS 267

Query: 162 PSDSENEE-IDVVTVEKRQSLGIR----KPVTITVRADPLDP-CMKHFHISIHQQQHNYA 215
             + E+EE IDVV+VEKRQ+ G R     P        P  P  +K  H+S H  QHNYA
Sbjct: 268 EEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVSTH--QHNYA 325

Query: 216 ARFPPESCSQEEASERGPQEEV-LERDAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVS 274
           A  PP +     A++R   + V + R  +  ++                    C   P S
Sbjct: 326 A--PPSTRKDYPAAKRVKLDSVRVLRQISNNRK--------------------C-TSPRS 362

Query: 275 SDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQALV 334
           SDTE+  KR+ HN LER+RRN+L+  F ALRDQ+P L +  KAPKVVIL KA  Y+ ++ 
Sbjct: 363 SDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQ 422

Query: 335 GAEKRMATEKRQLRCRQQQLQKRIAYL 361
             E+++ +E+  LR R++QL+ ++  L
Sbjct: 423 AEEQKLISEEDLLRKRREQLKHKLEQL 449


>gi|21704263 MAX protein isoform b [Homo sapiens]
          Length = 151

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 279 DVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQ 331
           D  KR +HN LERKRR+ ++  F +LRD VP+L    KA +  IL KA EY+Q
Sbjct: 12  DADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQG-EKASRAQILDKATEYIQ 63


>gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens]
          Length = 193

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 28/81 (34%), Positives = 46/81 (56%)

Query: 283 RKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMAT 342
           R  HN LE++RR  L+     L+ Q+P  A C++   + +L +A  ++Q L   E+R   
Sbjct: 59  RSVHNELEKRRRAQLKRCLERLKQQMPLGADCARYTTLSLLRRARMHIQKLEDQEQRARQ 118

Query: 343 EKRQLRCRQQQLQKRIAYLTG 363
            K +LR +QQ LQ+++  L G
Sbjct: 119 LKERLRSKQQSLQRQLEQLRG 139


>gi|13775222 MAX dimerization protein 3 isoform a [Homo sapiens]
          Length = 206

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 28/81 (34%), Positives = 46/81 (56%)

Query: 283 RKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQALVGAEKRMAT 342
           R  HN LE++RR  L+     L+ Q+P  A C++   + +L +A  ++Q L   E+R   
Sbjct: 59  RSVHNELEKRRRAQLKRCLERLKQQMPLGADCARYTTLSLLRRARMHIQKLEDQEQRARQ 118

Query: 343 EKRQLRCRQQQLQKRIAYLTG 363
            K +LR +QQ LQ+++  L G
Sbjct: 119 LKERLRSKQQSLQRQLEQLRG 139


>gi|21704269 MAX protein isoform e [Homo sapiens]
          Length = 134

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 282 KRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQ 331
           KR +HN LERKRR+ ++  F +LRD VP+L    KA +  IL KA EY+Q
Sbjct: 24  KRAHHNALERKRRDHIKDSFHSLRDSVPSLQG-EKASRAQILDKATEYIQ 72


>gi|21704265 MAX protein isoform c [Homo sapiens]
          Length = 103

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 282 KRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQ 331
           KR +HN LERKRR+ ++  F +LRD VP+L    KA +  IL KA EY+Q
Sbjct: 24  KRAHHNALERKRRDHIKDSFHSLRDSVPSLQG-EKASRAQILDKATEYIQ 72


>gi|21704261 MAX protein isoform a [Homo sapiens]
          Length = 160

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 282 KRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQ 331
           KR +HN LERKRR+ ++  F +LRD VP+L    KA +  IL KA EY+Q
Sbjct: 24  KRAHHNALERKRRDHIKDSFHSLRDSVPSLQG-EKASRAQILDKATEYIQ 72


>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
          Length = 1120

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 76/293 (25%), Positives = 100/293 (34%), Gaps = 60/293 (20%)

Query: 37  PSPPTSPPWGLGPGAGDPAPGIGPPEP--------WPGGCTGD-EAESRGHSKGWGRNYA 87
           P PP   PW     AG PA    PP P         PG   GD E E+ G       +YA
Sbjct: 686 PGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSYA 745

Query: 88  SIIRRDCMWSGFSARERLERAVSDRLAPGAPRGN--------------PPK-----ASAA 128
           ++ RR     G SA  R   +V+   A G PR                PPK     +  +
Sbjct: 746 TLTRR----PGRSALVRTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPS 801

Query: 129 PDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESP---------SDSENEEIDVV-TVEKR 178
           P+  P  E+  P   A  P     ++    SE P         SD+E EE     T   R
Sbjct: 802 PEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSR 861

Query: 179 QSLGIRKP------VTITVRADPLDPCMKHFHI----SIHQQQHNYAARFPPESCSQEEA 228
            S G   P      +TI  R  P  P  +   +      +  + +   R P       + 
Sbjct: 862 GSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDFNLTESDTVKRRP-------KC 914

Query: 229 SERGPQEEVLERDAAGEKEDEEDEEIVSPPPVESEAAQSC-HPKPVSSDTEDV 280
            ER P +  L               + SP P ES  A S   P+P S   + V
Sbjct: 915 REREPLQTALLAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGV 967



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 115 PGAPRGNPPKASAAPDCTPSL--EAGNPAPAAPCPLGEPKTQACSG 158
           P    G  P AS+ P   PS     G P P AP P  +P    C G
Sbjct: 941 PSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPG 986


>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
          Length = 1202

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 76/293 (25%), Positives = 100/293 (34%), Gaps = 60/293 (20%)

Query: 37   PSPPTSPPWGLGPGAGDPAPGIGPPEP--------WPGGCTGD-EAESRGHSKGWGRNYA 87
            P PP   PW     AG PA    PP P         PG   GD E E+ G       +YA
Sbjct: 768  PGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSYA 827

Query: 88   SIIRRDCMWSGFSARERLERAVSDRLAPGAPRGN--------------PPK-----ASAA 128
            ++ RR     G SA  R   +V+   A G PR                PPK     +  +
Sbjct: 828  TLTRR----PGRSALVRTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPS 883

Query: 129  PDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESP---------SDSENEEIDVV-TVEKR 178
            P+  P  E+  P   A  P     ++    SE P         SD+E EE     T   R
Sbjct: 884  PEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSR 943

Query: 179  QSLGIRKP------VTITVRADPLDPCMKHFHI----SIHQQQHNYAARFPPESCSQEEA 228
             S G   P      +TI  R  P  P  +   +      +  + +   R P       + 
Sbjct: 944  GSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDFNLTESDTVKRRP-------KC 996

Query: 229  SERGPQEEVLERDAAGEKEDEEDEEIVSPPPVESEAAQSC-HPKPVSSDTEDV 280
             ER P +  L               + SP P ES  A S   P+P S   + V
Sbjct: 997  REREPLQTALLAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGV 1049



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 115  PGAPRGNPPKASAAPDCTPSL--EAGNPAPAAPCPLGEPKTQACSG 158
            P    G  P AS+ P   PS     G P P AP P  +P    C G
Sbjct: 1023 PSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPG 1068


>gi|47717116 MAX interactor 1 isoform b [Homo sapiens]
          Length = 295

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 66/267 (24%), Positives = 99/267 (37%), Gaps = 53/267 (19%)

Query: 98  GFSARERLE-RAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQAC 156
           G   R R E R     LAP AP   PP A AAP   P     +PA A P          C
Sbjct: 2   GKRGRPRKEARCEGAGLAPAAPPAVPP-AVAAPQ--PPALPEDPAGAKP---------RC 49

Query: 157 SGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAA 216
             S+  + SEN      ++EK  +  ++    +   A  L+   K       + +H YA+
Sbjct: 50  PFSDIFNTSEN------SMEKHINTFLQNVQILLEAASYLEQIEKENK----KCEHGYAS 99

Query: 217 RFPPESCSQEEASERGPQEEVLERDAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSD 276
            FP     + + S+                           PP     AQ        S 
Sbjct: 100 SFPSMPSPRLQHSK---------------------------PPRRLSRAQK---HSSGSS 129

Query: 277 TEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQALVGA 336
                 R  HN LE+ RR  LR     L+  +P    C++   + +L+KA  +++ L  A
Sbjct: 130 NTSTANRSTHNELEKNRRAHLRLCLERLKVLIPLGPDCTRHTTLGLLNKAKAHIKKLEEA 189

Query: 337 EKRMATEKRQLRCRQQQLQKRIAYLTG 363
           E++   +   L   Q+ L+ R+  L G
Sbjct: 190 ERKSQHQLENLEREQRFLKWRLEQLQG 216


>gi|30795242 aryl hydrocarbon receptor nuclear translocator isoform
           3 [Homo sapiens]
          Length = 774

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 268 CHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAP-KVVILSKA 326
           C    +S+D E    R+NH+ +ER+RRN + +    L D VPT ++ ++ P K+ IL  A
Sbjct: 62  CDDDQMSNDKERFA-RENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMA 120

Query: 327 LEYLQALVG 335
           + ++++L G
Sbjct: 121 VSHMKSLRG 129


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 59/247 (23%), Positives = 89/247 (36%), Gaps = 29/247 (11%)

Query: 37  PSPPTSP-----PWGLGPGAGDPAPG-IGPPEP----WPGGCTGDEAESRGHSKGWGRNY 86
           P PP  P     PW   P    P PG +  P P    +PG    D       S+G     
Sbjct: 449 PPPPPPPRDGPFPWPWPPAHSAPRPGTLSSPFPLLDGFPGADPDDVLTVTESSRG----- 503

Query: 87  ASIIRRDCMWSGFSARERLER-----AVSDRLAPGAPRGNPP----KASAAPDCTPSLEA 137
              +  +C+W    AR    R     A     AP AP  NP     +A + P   P + A
Sbjct: 504 ---LNLECLWE--KARRGAGRGGGAPAWQPASAPPAPHANPSNPFYEALSTPSVLPVISA 558

Query: 138 GNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITVRADPLD 197
            +P+ ++   +   +  +      P+D +  +  V   +  Q+      +     A PL 
Sbjct: 559 RSPSVSSEYYIRLEEHGSPPEPLFPNDWDPLDPGVPAPQAPQAPSEVPQLVSETWASPLF 618

Query: 198 PCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLERDAAGEKEDEEDEEIVSP 257
           P  + F            + + PE     E     P E + ER  A   E+EE+EE  S 
Sbjct: 619 PAPRPFPAQSSASGSFLLSGWDPEGRGAGETLAGDPAEVLGERGTAPWVEEEEEEEEGSS 678

Query: 258 PPVESEA 264
           P  +S +
Sbjct: 679 PGEDSSS 685


>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform
           2 [Homo sapiens]
          Length = 328

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 274 SSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAP-KVVILSKALEYLQA 332
           SS  ++   R+NH+ +ER+RRN + +    L D VPT ++ ++ P K+ IL  A+ ++++
Sbjct: 82  SSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKS 141

Query: 333 LVG 335
           L G
Sbjct: 142 LRG 144


>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
           [Homo sapiens]
          Length = 789

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 274 SSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAP-KVVILSKALEYLQA 332
           SS  ++   R+NH+ +ER+RRN + +    L D VPT ++ ++ P K+ IL  A+ ++++
Sbjct: 82  SSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKS 141

Query: 333 LVG 335
           L G
Sbjct: 142 LRG 144


>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
          Length = 1233

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 60/280 (21%), Positives = 107/280 (38%), Gaps = 33/280 (11%)

Query: 35   LVPSPPTSPPWGLG------PGAGDPAPGIGPPEPWPGGCTGDEAESRGHSKGWGRNYAS 88
            LVPS P  P   +           + A GI  P+P   G  G+E  S    K    NY+ 
Sbjct: 799  LVPSLPYPPQKVVAHTEFTTSSDSETANGIAKPDPVMPG--GEEKASPFGIKLRRTNYS- 855

Query: 89   IIRRDCMWSGFSARERLERAVSDRLAPGAP-----RGNPPKASAAPDCTPSL-------- 135
             +R +C       +++   +  D    G P     RG       A    PSL        
Sbjct: 856  -LRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSLPQERKQAP 914

Query: 136  ----EAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITV 191
                ++  P+ +   P+  P     S S++P+   ++  + + + ++ +L   KP + T 
Sbjct: 915  STRRDSAEPSSSRSVPVAHPGPPPAS-SQTPAPEHDKAANKMPLAQKPALA-PKPTSQTP 972

Query: 192  RADPLDPCMKHFHISIHQQQHNYAARFPPE-SCSQEEASERGPQEEVLERDAAGEKEDEE 250
             A PL    + + + +  ++       P E S   +E+S+R P       +  G+K DEE
Sbjct: 973  PASPLSKLSRPYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPSPPGPEERKGQKRDEE 1032

Query: 251  DEEI---VSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHN 287
            +E      + PP+ +   +     P +   E    +  H+
Sbjct: 1033 EEATERKPASPPLPATQQEKPSQTPEAGRKEKPMLQSRHS 1072


>gi|237512940 early growth response 4 [Homo sapiens]
          Length = 589

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 36/106 (33%), Positives = 44/106 (41%), Gaps = 25/106 (23%)

Query: 55  APGIGPPEPWP------GGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERA 108
           A G+G PEP P      GGC            G G   +++ RR     G +AR R  RA
Sbjct: 4   ARGVGSPEPAPPQLYKWGGC------------GLGEPGSALERR-----GAAARGRCGRA 46

Query: 109 VSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQ 154
            + RL    PRG  PK  A      S+  G P P A  P   P+ Q
Sbjct: 47  RAPRLPDSFPRGECPKPGAR--APRSVRCGEPLPPASPPPARPQAQ 90


>gi|145199237 transcription elongation factor B polypeptide 3
           binding protein 1 [Homo sapiens]
          Length = 1221

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 41/216 (18%)

Query: 40  PTSPPWGLGPGAGD--PAPGIGPPEPW----------PGGCTGDEAESRGHSKGWGRNYA 87
           P  P     P +GD  PA G GPP P           P G    E ++R   +G  ++  
Sbjct: 451 PDRPARRPSPTSGDSRPAAGRGPPRPLQLPDRKSTKAPSGKLV-ERKARSLDEGASQDAP 509

Query: 88  SIIRRDCMWSGFSARERLERAVSDRLAPGAPRGNP---PKASAAPDCTPSLEAGNPAPAA 144
            + +R    +     E  + A      PG P   P   P  S+  D       G P    
Sbjct: 510 KLKKRALSHADLFGDESEDEAAG----PGVPSVWPSALPSLSSDSDSDSDSSLGFPEAQG 565

Query: 145 P------CPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQSLGIRKPVTITVRADPLDP 198
           P       P   P   + S S S + S   ++D   +EK           +   +DP++ 
Sbjct: 566 PPKRLKASPPPSPAPSSSSSSSSSTSSAGADVDYSALEKE----------VDFDSDPMEE 615

Query: 199 CMKHFH--ISIHQQQHNYAARFPPESCSQEEASERG 232
           C++ F+   S+  +     AR PP+   +E++ E+G
Sbjct: 616 CLRIFNESTSVKTEDRGRLARQPPK---EEKSEEKG 648


>gi|57242782 MAX interactor 1 isoform a [Homo sapiens]
          Length = 228

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 256 SPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCS 315
           S PP     AQ        S       R  HN LE+ RR  LR     L+  +P    C+
Sbjct: 45  SKPPRRLSRAQK---HSSGSSNTSTANRSTHNELEKNRRAHLRLCLERLKVLIPLGPDCT 101

Query: 316 KAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAYLTG 363
           +   + +L+KA  +++ L  AE++   +   L   Q+ L+ R+  L G
Sbjct: 102 RHTTLGLLNKAKAHIKKLEEAERKSQHQLENLEREQRFLKWRLEQLQG 149


>gi|9945318 MAX binding protein [Homo sapiens]
          Length = 582

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 257 PPPVESEAAQSCHPKPVSSDTED-----VTKRKNHNFLERKRRNDLRSRFLALRDQVPTL 311
           PPP      +    + V S  +      +  R+ HN LE+ RR  L+  F  L+  +P +
Sbjct: 191 PPPPTLGTLKLAPAEEVKSSEQKKRPGGIGTREVHNKLEKNRRAHLKECFETLKRNIPNV 250

Query: 312 ASCSKAPKVVILSKALEYLQALVGAEKRMATEKRQLRCRQQQLQKRIAYL 361
               K   + +L  AL Y+Q+L   EK    E  +L   +   Q+R+A L
Sbjct: 251 DD-KKTSNLSVLRTALRYIQSLKRKEKEYEHEMERLAREKIATQQRLAEL 299


>gi|52630419 sterol regulatory element binding transcription factor
           1 isoform a [Homo sapiens]
          Length = 1177

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 259 PVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAP 318
           P+   AA S  P    S  E   KR  HN +E++ R+ +  + + L+D V  + + +K  
Sbjct: 334 PINRLAAGSKAPASAQSRGE---KRTAHNAIEKRYRSSINDKIIELKDLV--VGTEAKLN 388

Query: 319 KVVILSKALEYLQALVGAEKRMATEKRQLR 348
           K  +L KA++Y++ L  + +++  E   LR
Sbjct: 389 KSAVLRKAIDYIRFLQHSNQKLKQENLSLR 418


>gi|22547195 sterol regulatory element binding transcription factor
           1 isoform b [Homo sapiens]
          Length = 1147

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 259 PVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAP 318
           P+   AA S  P    S  E   KR  HN +E++ R+ +  + + L+D V  + + +K  
Sbjct: 304 PINRLAAGSKAPASAQSRGE---KRTAHNAIEKRYRSSINDKIIELKDLV--VGTEAKLN 358

Query: 319 KVVILSKALEYLQALVGAEKRMATEKRQLR 348
           K  +L KA++Y++ L  + +++  E   LR
Sbjct: 359 KSAVLRKAIDYIRFLQHSNQKLKQENLSLR 388


>gi|68303555 aryl hydrocarbon receptor nuclear translocator 2 [Homo
           sapiens]
          Length = 717

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 283 RKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAP-KVVILSKALEYLQALVG 335
           R+NH+ +ER+RRN +      L D VPT ++ ++ P K+ IL  A+ +++++ G
Sbjct: 65  RENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRG 118


>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
          Length = 382

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 15/117 (12%)

Query: 226 EEASERGPQEEVLERDAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTK--- 282
           EE +E    E   E +  GE+E+EE+EE         + A+   PK        +TK   
Sbjct: 63  EEGTEATLAEVKEEGELGGEEEEEEEEE------EGLDEAEGERPKKRGPKKRKMTKARL 116

Query: 283 ------RKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQAL 333
                 R+  N  ER R +DL +    LR  VP  +   K  K+  L  A  Y+ AL
Sbjct: 117 ERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWAL 173


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 20/103 (19%)

Query: 50  GAGDPAPGIGPP-EPWPGGCT--------GDEAESRGHSKGWGRNYASIIRRDCMWSGFS 100
           G G+P+PG G P +  P G T        G EA   G + G G  Y  II+     +G  
Sbjct: 335 GGGEPSPGAGEPSKAGPSGATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTG-- 392

Query: 101 ARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPA 143
                 +      A GA R  PP+++A P C      G PA A
Sbjct: 393 ------KGGYGAAAGGATRPPPPRSTATPKCQ---SLGGPAAA 426



 Score = 29.3 bits (64), Expect = 5.8
 Identities = 40/157 (25%), Positives = 57/157 (36%), Gaps = 30/157 (19%)

Query: 38   SPPTSPPWGLGPGAGDPAPGIGP--------PEPWPGGCTG-----DEAESRGHSKGWG- 83
            +PP SPP  + P    PA G+ P        P P P G  G     + AES G   G   
Sbjct: 1304 TPPLSPPKSVPPSV--PARGLQPQPPATPAVPHPPPSGAFGLGGALEAAESEGLGLGCPS 1361

Query: 84   ----------RNYASIIRRDCMWSGFSARER-LERAVSDRLAPGAPRGNPPKASAAPDCT 132
                      RN  ++           A+ R L+ ++S  ++      +PP A      T
Sbjct: 1362 PCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISA---LDDPPLAGPKDTST 1418

Query: 133  PSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEE 169
            P      PA A P P   P   + + + +P     EE
Sbjct: 1419 PDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEE 1455


>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
           homolog 2 [Homo sapiens]
          Length = 1210

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 17/150 (11%)

Query: 122 PPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQSL 181
           PP +SA P    SL    P P A       ++++ S S+S SDSE+E     + E     
Sbjct: 444 PPSSSAPPSAPQSL----PEPVASAHSSSAESESTSDSDSSSDSESESSSSDSEE----- 494

Query: 182 GIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLERD 241
              +P+  T   +P  P    + +     + +  A  PPE     E   R P+ +    D
Sbjct: 495 --NEPLE-TPAPEPEPPTTNKWQLDNWLTKVSQPAA-PPEGPRSTEPPRRHPESKG-SSD 549

Query: 242 AAGEKEDEEDEEIVSPPPVESEAAQSCHPK 271
           +A  +E  E ++   PPP  S  A    P+
Sbjct: 550 SATSQEHSESKD---PPPKSSSKAPRAPPE 576


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.131    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,768,605
Number of Sequences: 37866
Number of extensions: 1193413
Number of successful extensions: 11004
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 536
Number of HSP's that attempted gapping in prelim test: 8429
Number of HSP's gapped (non-prelim): 2523
length of query: 364
length of database: 18,247,518
effective HSP length: 104
effective length of query: 260
effective length of database: 14,309,454
effective search space: 3720458040
effective search space used: 3720458040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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