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Search of human proteins with 74229029
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]
(443 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens] 905 0.0
gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens] 880 0.0
gi|6912546 F-box only protein 9 isoform 1 [Homo sapiens] 49 7e-06
gi|53692184 F-box only protein 9 isoform 3 [Homo sapiens] 49 7e-06
gi|15812201 F-box only protein 9 isoform 2 [Homo sapiens] 49 7e-06
gi|160707881 formin 2 [Homo sapiens] 42 9e-04
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 42 0.001
gi|7706501 WW domain binding protein 11 [Homo sapiens] 41 0.002
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 40 0.004
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 38 0.016
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 38 0.016
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 38 0.021
gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo s... 37 0.028
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 37 0.028
gi|19913396 smoothelin isoform b [Homo sapiens] 37 0.028
gi|19913394 smoothelin isoform c [Homo sapiens] 37 0.028
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 37 0.028
gi|8922157 proline rich 13 isoform 1 [Homo sapiens] 37 0.028
gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens] 37 0.036
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens] 37 0.036
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens] 37 0.036
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens] 37 0.036
gi|19913398 smoothelin isoform a [Homo sapiens] 37 0.047
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 36 0.061
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 36 0.061
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 36 0.061
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 36 0.061
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 36 0.061
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 36 0.061
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 36 0.061
>gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]
Length = 443
Score = 905 bits (2339), Expect = 0.0
Identities = 443/443 (100%), Positives = 443/443 (100%)
Query: 1 MARPPGGSGPLLDSEHSSLQNNEQPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSM 60
MARPPGGSGPLLDSEHSSLQNNEQPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSM
Sbjct: 1 MARPPGGSGPLLDSEHSSLQNNEQPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSM 60
Query: 61 LGPSQNFEAESIQDNAHMAEGTGFYPSEPMLCSESVEGQVPHSLETLYQSADCSDANDAL 120
LGPSQNFEAESIQDNAHMAEGTGFYPSEPMLCSESVEGQVPHSLETLYQSADCSDANDAL
Sbjct: 61 LGPSQNFEAESIQDNAHMAEGTGFYPSEPMLCSESVEGQVPHSLETLYQSADCSDANDAL 120
Query: 121 IVLIHLLMLESGYIPQGTEAKALSMPEKWKLSGVYKLQYMHPLCEGSSATLTCVPLGNLI 180
IVLIHLLMLESGYIPQGTEAKALSMPEKWKLSGVYKLQYMHPLCEGSSATLTCVPLGNLI
Sbjct: 121 IVLIHLLMLESGYIPQGTEAKALSMPEKWKLSGVYKLQYMHPLCEGSSATLTCVPLGNLI 180
Query: 181 VVNATLKINNEIRSVKRLQLLPESFICKEKLGENVANIYKDLQKLSRLFKDQLVYPLLAF 240
VVNATLKINNEIRSVKRLQLLPESFICKEKLGENVANIYKDLQKLSRLFKDQLVYPLLAF
Sbjct: 181 VVNATLKINNEIRSVKRLQLLPESFICKEKLGENVANIYKDLQKLSRLFKDQLVYPLLAF 240
Query: 241 TRQALNLPDVFGLVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRD 300
TRQALNLPDVFGLVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRD
Sbjct: 241 TRQALNLPDVFGLVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRD 300
Query: 301 FRDNTVRVQDTDWKELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRL 360
FRDNTVRVQDTDWKELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRL
Sbjct: 301 FRDNTVRVQDTDWKELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRL 360
Query: 361 PPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNPILPGRG 420
PPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNPILPGRG
Sbjct: 361 PPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNPILPGRG 420
Query: 421 GPNDRFPFRPSRGRPTDGRLSFM 443
GPNDRFPFRPSRGRPTDGRLSFM
Sbjct: 421 GPNDRFPFRPSRGRPTDGRLSFM 443
>gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens]
Length = 522
Score = 880 bits (2274), Expect = 0.0
Identities = 431/431 (100%), Positives = 431/431 (100%)
Query: 13 DSEHSSLQNNEQPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSMLGPSQNFEAESI 72
DSEHSSLQNNEQPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSMLGPSQNFEAESI
Sbjct: 92 DSEHSSLQNNEQPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSMLGPSQNFEAESI 151
Query: 73 QDNAHMAEGTGFYPSEPMLCSESVEGQVPHSLETLYQSADCSDANDALIVLIHLLMLESG 132
QDNAHMAEGTGFYPSEPMLCSESVEGQVPHSLETLYQSADCSDANDALIVLIHLLMLESG
Sbjct: 152 QDNAHMAEGTGFYPSEPMLCSESVEGQVPHSLETLYQSADCSDANDALIVLIHLLMLESG 211
Query: 133 YIPQGTEAKALSMPEKWKLSGVYKLQYMHPLCEGSSATLTCVPLGNLIVVNATLKINNEI 192
YIPQGTEAKALSMPEKWKLSGVYKLQYMHPLCEGSSATLTCVPLGNLIVVNATLKINNEI
Sbjct: 212 YIPQGTEAKALSMPEKWKLSGVYKLQYMHPLCEGSSATLTCVPLGNLIVVNATLKINNEI 271
Query: 193 RSVKRLQLLPESFICKEKLGENVANIYKDLQKLSRLFKDQLVYPLLAFTRQALNLPDVFG 252
RSVKRLQLLPESFICKEKLGENVANIYKDLQKLSRLFKDQLVYPLLAFTRQALNLPDVFG
Sbjct: 272 RSVKRLQLLPESFICKEKLGENVANIYKDLQKLSRLFKDQLVYPLLAFTRQALNLPDVFG 331
Query: 253 LVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVRVQDTD 312
LVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVRVQDTD
Sbjct: 332 LVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVRVQDTD 391
Query: 313 WKELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRLPPGIIGGEYDQR 372
WKELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRLPPGIIGGEYDQR
Sbjct: 392 WKELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRLPPGIIGGEYDQR 451
Query: 373 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNPILPGRGGPNDRFPFRPSR 432
PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNPILPGRGGPNDRFPFRPSR
Sbjct: 452 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNPILPGRGGPNDRFPFRPSR 511
Query: 433 GRPTDGRLSFM 443
GRPTDGRLSFM
Sbjct: 512 GRPTDGRLSFM 522
>gi|6912546 F-box only protein 9 isoform 1 [Homo sapiens]
Length = 447
Score = 49.3 bits (116), Expect = 7e-06
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 212 GENVANIYKDLQKLSRLFKDQLVY--PLLAFTRQALNL--PDV----FGLVVLPLELKLR 263
G+ V N Y + D L Y L F L L P++ + VLP+E+ +
Sbjct: 139 GDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMY 198
Query: 264 IFRL-----LDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVR-VQDTDWKELY 317
IFR LD+RS+ LS VCR + + DP +WR L+ + + ++ V T W+E++
Sbjct: 199 IFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMF 258
Query: 318 RKR 320
+R
Sbjct: 259 LER 261
>gi|53692184 F-box only protein 9 isoform 3 [Homo sapiens]
Length = 403
Score = 49.3 bits (116), Expect = 7e-06
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 212 GENVANIYKDLQKLSRLFKDQLVY--PLLAFTRQALNL--PDV----FGLVVLPLELKLR 263
G+ V N Y + D L Y L F L L P++ + VLP+E+ +
Sbjct: 95 GDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMY 154
Query: 264 IFRL-----LDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVR-VQDTDWKELY 317
IFR LD+RS+ LS VCR + + DP +WR L+ + + ++ V T W+E++
Sbjct: 155 IFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMF 214
Query: 318 RKR 320
+R
Sbjct: 215 LER 217
>gi|15812201 F-box only protein 9 isoform 2 [Homo sapiens]
Length = 437
Score = 49.3 bits (116), Expect = 7e-06
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 212 GENVANIYKDLQKLSRLFKDQLVY--PLLAFTRQALNL--PDV----FGLVVLPLELKLR 263
G+ V N Y + D L Y L F L L P++ + VLP+E+ +
Sbjct: 129 GDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMY 188
Query: 264 IFRL-----LDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVR-VQDTDWKELY 317
IFR LD+RS+ LS VCR + + DP +WR L+ + + ++ V T W+E++
Sbjct: 189 IFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMF 248
Query: 318 RKR 320
+R
Sbjct: 249 LER 251
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 42.4 bits (98), Expect = 9e-04
Identities = 35/92 (38%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 349 PLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVG 407
PL P P PP + G P LP G P+ +PG G P PPL P
Sbjct: 933 PLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPP--PPLPGAGIPPPP 990
Query: 408 PLPG----PNPILPGRGGPNDRFPFRPSRGRP 435
PLPG P P LPG G P P P G P
Sbjct: 991 PLPGAGIPPPPPLPGAGIPPP--PPLPGAGIP 1020
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/79 (39%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPR--FDPVG 407
P P P +PP + G P LP G P +PG G P PP PR P
Sbjct: 1099 PPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPPLPRVGIPPPP 1155
Query: 408 PLPG----PNPILPGRGGP 422
PLPG P P LPG G P
Sbjct: 1156 PLPGAGIPPPPPLPGAGIP 1174
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVGP 408
P P P + +PP + G P LP VG P +PG G P PPL P P
Sbjct: 1121 PPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPP--PPLPGAGIPPPPP 1178
Query: 409 LPG----PNPILPGRGGPNDRFPFRPSRGRP 435
LPG P P LPG G P P P G P
Sbjct: 1179 LPGVGIPPPPPLPGVGIPPP--PPLPGAGIP 1207
Score = 38.9 bits (89), Expect = 0.009
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVGP 408
P P P + +PP + G P LP G P +PG G P PPL P P
Sbjct: 978 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPPP 1035
Query: 409 LPG----PNPILPGRGGPNDRFPFRPSRGRP 435
LPG P P LPG G P P P G P
Sbjct: 1036 LPGAGIPPPPPLPGAGIPPP--PPLPGAGIP 1064
Score = 38.9 bits (89), Expect = 0.009
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVGP 408
P P P + +PP + G P LP G P +PG G P PPL P P
Sbjct: 989 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPPP 1046
Query: 409 LPG----PNPILPGRGGPNDRFPFRPSRGRP 435
LPG P P LPG G P P P G P
Sbjct: 1047 LPGAGIPPPPPLPGAGIPPP--PPLPGAGIP 1075
Score = 38.9 bits (89), Expect = 0.009
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVGP 408
P P P + +PP + G P LP G P +PG G P PPL P P
Sbjct: 1000 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPPP 1057
Query: 409 LPG----PNPILPGRGGPNDRFPFRPSRGRP 435
LPG P P LPG G P P P G P
Sbjct: 1058 LPGAGIPPPPPLPGAGIPPP--PPLPGAGIP 1086
Score = 38.9 bits (89), Expect = 0.009
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVGP 408
P P P + +PP + G P LP G P +PG G P PPL P P
Sbjct: 1011 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPPP 1068
Query: 409 LPG----PNPILPGRGGPNDRFPFRPSRGRP 435
LPG P P LPG G P P P G P
Sbjct: 1069 LPGAGIPPPPPLPGAGIPPP--PPLPGAGIP 1097
Score = 38.9 bits (89), Expect = 0.009
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVGP 408
P P P + +PP + G P LP G P +PG G P PPL P P
Sbjct: 1044 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPPP 1101
Query: 409 LPG----PNPILPGRGGPNDRFPFRPSRGRP 435
LPG P P LPG G P P P G P
Sbjct: 1102 LPGVGIPPPPPLPGAGIPPP--PPLPGAGIP 1130
Score = 38.9 bits (89), Expect = 0.009
Identities = 34/92 (36%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRP--RFDPVG 407
P P P + +PP + G P LP G P +PG G P PP P P
Sbjct: 1055 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPPLPGVGIPPPP 1111
Query: 408 PLPG----PNPILPGRGGPNDRFPFRPSRGRP 435
PLPG P P LPG G P P P G P
Sbjct: 1112 PLPGAGIPPPPPLPGAGIPPP--PPLPGAGIP 1141
Score = 38.1 bits (87), Expect = 0.016
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVGP 408
P P P + +PP + G P LP G P +PG G P PPL P P
Sbjct: 1033 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIPPPPP 1090
Query: 409 LPG----PNPILPGRGGPNDRFPFRPSRGRP 435
LPG P P LPG G P P P G P
Sbjct: 1091 LPGAGIPPPPPLPGVGIPPP--PPLPGAGIP 1119
Score = 38.1 bits (87), Expect = 0.016
Identities = 36/100 (36%), Positives = 39/100 (39%), Gaps = 13/100 (13%)
Query: 344 PFYPNPLHPRPFPSSRL----PPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL 399
P P P P P R+ PP + G P LP G P +PG G P PP
Sbjct: 1133 PPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP---PPP 1189
Query: 400 RP--RFDPVGPLPG----PNPILPGRGGPNDRFPFRPSRG 433
P P PLPG P P LPG G P P P G
Sbjct: 1190 LPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPG 1229
Score = 37.4 bits (85), Expect = 0.028
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPL 409
P P P +PP + G P LP G P +PG G P+ PPL P P +
Sbjct: 1176 PPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPP---PGTGI 1232
Query: 410 PGPNPILPGRGGP 422
P P P+LP G P
Sbjct: 1233 P-PPPLLPVSGPP 1244
Score = 35.4 bits (80), Expect = 0.10
Identities = 34/94 (36%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 349 PLHPRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPV 406
P P P P + +PP + G P LP G P +PG P PPL P+
Sbjct: 909 PPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPP--PPLPGAGIPL 966
Query: 407 -GPLPG----PNPILPGRGGPNDRFPFRPSRGRP 435
PLPG P P LPG G P P P G P
Sbjct: 967 PPPLPGAGIPPPPPLPGAGIPPP--PPLPGAGIP 998
Score = 35.4 bits (80), Expect = 0.10
Identities = 33/90 (36%), Positives = 35/90 (38%), Gaps = 20/90 (22%)
Query: 352 PRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRP--RFDPVGPL 409
P P P +PP P LP G P +PG G P PP P P PL
Sbjct: 1143 PPPLPRVGIPPP---------PPLPGAGIPPPPPLPGAGIPP---PPPLPGVGIPPPPPL 1190
Query: 410 PG----PNPILPGRGGPNDRFPFRPSRGRP 435
PG P P LPG G P P P G P
Sbjct: 1191 PGVGIPPPPPLPGAGIPPP--PPLPGMGIP 1218
Score = 35.4 bits (80), Expect = 0.10
Identities = 31/86 (36%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPL 409
P P P + +PP + G P LP VG P +PG G P PPL P P
Sbjct: 1165 PPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPP--PPLPGMGIPPAPA 1222
Query: 410 PGPNPILPGRGGPNDRFPFRPSRGRP 435
P P PG G P P P G P
Sbjct: 1223 PPLPP--PGTGIPPP--PLLPVSGPP 1244
Score = 35.0 bits (79), Expect = 0.14
Identities = 32/89 (35%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 342 TIPFYPNPLHPRPFP---SSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPP 398
T+P P+ P+P P + LPP P LP G P +PG G PP
Sbjct: 887 TVPTLPSTAIPQPPPLQGTEMLPP--------PPPPLPGAGIPPPPPLPGAGIL--PLPP 936
Query: 399 L-RPRFDPVGPLPG----PNPILPGRGGP 422
L P PLPG P P LPG G P
Sbjct: 937 LPGAGIPPPPPLPGAAIPPPPPLPGAGIP 965
Score = 34.3 bits (77), Expect = 0.23
Identities = 29/78 (37%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 352 PRPFPSSRLPPG--IIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPL-RPRFDPVGP 408
P P P + +PP + G P LP G P +P G P PPL P P
Sbjct: 1110 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPP--PPLPGAGIPPPPP 1167
Query: 409 LPG----PNPILPGRGGP 422
LPG P P LPG G P
Sbjct: 1168 LPGAGIPPPPPLPGVGIP 1185
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 42.0 bits (97), Expect = 0.001
Identities = 37/100 (37%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 345 FYPNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFD 404
F P P P P P P G +G P P GDP GPG+ P + P+R
Sbjct: 643 FPPGPGGPMPGPHGG-PGGPVGPRLLGPPPPPRGGDPFWD---GPGD-PMRGGPMRG--- 694
Query: 405 PVGPLPGPNPILPGRGG------PNDRFPFRPSRGRPTDG 438
GP PGP P GRGG P PFR +RG + G
Sbjct: 695 --GPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGG 732
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 349 PLHPRPFPSSRLPPGIIGGE--YDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPV 406
PL P P P + LPPG G + + P +P + P+ L+P PG PP RP P
Sbjct: 420 PLRP-PGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLP-PGP-----PPGRPPGPPP 472
Query: 407 GPLPGPNPILPGRGGP 422
GP PG P P RG P
Sbjct: 473 GPPPGLPPGPPPRGPP 488
Score = 34.3 bits (77), Expect = 0.23
Identities = 33/89 (37%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 347 PNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPV 406
P PL P P P R PPG G P P G P PG P L P P
Sbjct: 410 PPPLGPPPAPPLR-PPGPPTG----LPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPP 464
Query: 407 GPLPGPNPILPGRGGPNDRFPFRPSRGRP 435
G PGP P G P P P RG P
Sbjct: 465 GRPPGPPP-----GPPPGLPPGPPPRGPP 488
Score = 33.5 bits (75), Expect = 0.40
Identities = 30/81 (37%), Positives = 32/81 (39%), Gaps = 12/81 (14%)
Query: 361 PPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNPIL---- 416
PP + Q P +P G P GP P PP P P GP PG P L
Sbjct: 393 PPQSVPPSQIQAPPMP--GPPPL----GPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPG 446
Query: 417 -PGRGGPNDR-FPFRPSRGRP 435
PG GP R P P GRP
Sbjct: 447 MPGLRGPLPRLLPPGPPPGRP 467
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 40.0 bits (92), Expect = 0.004
Identities = 32/90 (35%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 349 PLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGP 408
P P PFP PPG +G P G P + P P P+ FPP P
Sbjct: 317 PPPPGPFPPR--PPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSD 374
Query: 409 LPGPNPILP-GRGGPNDRFPFRPSRGRPTD 437
GP P P GR P DR + P GR D
Sbjct: 375 SRGPPPTDPYGRPPPYDRGDYGPP-GREMD 403
Score = 38.9 bits (89), Expect = 0.009
Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 19/95 (20%)
Query: 344 PFYPNPLHPRPFPSSRLPPGIIG----GEYDQRPTL----PYVGDPISSLIPGPGETPSQ 395
P P P P P P LPP + G G+ P L P+ P+ L PGP
Sbjct: 244 PGPPGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGP------ 296
Query: 396 FPPLRPRFDPVGPLPGPNPILPGRGGPNDRFPFRP 430
PP P + GP PGP P G P FP RP
Sbjct: 297 -PPPVPGY---GPPPGPPPPQQGPPPPPGPFPPRP 327
Score = 37.4 bits (85), Expect = 0.028
Identities = 39/129 (30%), Positives = 48/129 (37%), Gaps = 37/129 (28%)
Query: 329 KGRFVMLLPSSTHTIPFYPNPLHPR----PFPSSRLPPGIIGGEYDQRPTLPYVGDPISS 384
+GRF +P +P P P PFP+ + PP RP L G P
Sbjct: 204 RGRFPGAVPGGDR----FPGPAGPGGPPPPFPAGQTPP---------RPPLGPPGPPGPP 250
Query: 385 LIPGPGET-----------------PSQFPPLRPRFDPVGPL-PGPNPILPGRGGPNDRF 426
P PG+ P FP P+GPL PGP P +PG G P
Sbjct: 251 GPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPG-- 308
Query: 427 PFRPSRGRP 435
P P +G P
Sbjct: 309 PPPPQQGPP 317
Score = 30.0 bits (66), Expect = 4.4
Identities = 23/55 (41%), Positives = 23/55 (41%), Gaps = 10/55 (18%)
Query: 388 GPGETPSQFP----PLRPRFDPVGPLPGPNPILPGRGGPNDRFPFRPSRGRPTDG 438
GPG P FP P RP P GP PGP PG P P P G P G
Sbjct: 222 GPGGPPPPFPAGQTPPRPPLGPPGP-PGP----PGPPPPGQVLP-PPLAGPPNRG 270
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 38.1 bits (87), Expect = 0.016
Identities = 31/81 (38%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 347 PNPLHPRPFPSSRLPPGIIGGEYDQR-PTLPYVGDPISSLIPGPGETPSQFP-PLR-PRF 403
P P+ P P P PG + G P + PI + IPGP P Q P P R P
Sbjct: 96 PGPI-PAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIP 154
Query: 404 DPV-GPLPGPNPILPGRGGPN 423
P+ GP P P PI GPN
Sbjct: 155 GPISGPAPIPGPISGPFSGPN 175
Score = 36.6 bits (83), Expect = 0.047
Identities = 32/80 (40%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 347 PNPLHPRPFPSSRLPPGIIGGEYDQRPTLP--YVGD-PISSLIPGPGETPSQFPPLRP-R 402
PNP P P P S PG+I G + P +G P + IPGPG P L P R
Sbjct: 234 PNP-GPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGR 292
Query: 403 FDPVGPLPGPNPILPGRGGP 422
G LPG PIL GP
Sbjct: 293 MRSPGSLPGLAPILGPGSGP 312
Score = 33.5 bits (75), Expect = 0.40
Identities = 30/82 (36%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 352 PRPFPSSRLPPGIIGGEYDQRPTLPYVGD-------PISSLIPGPGETPSQFPPLRPRFD 404
P P PG I G + P G PIS IPGP P P P
Sbjct: 154 PGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISG 213
Query: 405 PV-GPLPGPNP-ILPGR-GGPN 423
P+ GP PGP P +PG GPN
Sbjct: 214 PISGPNPGPIPGPIPGPISGPN 235
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo
sapiens]
Length = 2161
Score = 38.1 bits (87), Expect = 0.016
Identities = 35/113 (30%), Positives = 39/113 (34%), Gaps = 15/113 (13%)
Query: 325 KESPKGRFVMLLPSSTH--TIPFYPNPLHPRPFPSSRLPPGIIGGEYDQRPTL--PYVGD 380
K PKG F H P Y P P P L IG D RP L P +
Sbjct: 849 KHRPKGFFATESSFDPHHRAQPSYERPSFLPPGPGLMLRQKSIGAAEDDRPYLAPPAMKF 908
Query: 381 PISSLIPG-----------PGETPSQFPPLRPRFDPVGPLPGPNPILPGRGGP 422
S +PG P E P PP+ + P P P PG GGP
Sbjct: 909 SRSLSVPGSEDIPPPPTTSPPEPPYSTPPVPSSSGRLTPSPRGGPFNPGSGGP 961
Score = 32.7 bits (73), Expect = 0.68
Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 12/105 (11%)
Query: 344 PFYPNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISS-------LIPG----PGET 392
P P+PL P P++ LPP PTL ++S L G PG+
Sbjct: 1586 PGPPHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDP 1645
Query: 393 PSQFPPLRPRFDPVGPLPGPNPILPGRGGPNDRFPFRPSRGRPTD 437
PP P P PGP+P PG + R S P +
Sbjct: 1646 HPPGPPAPAAPAPAAPQPGPDP-PPGTDSGIEEVDSRSSSDHPLE 1689
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 37.7 bits (86), Expect = 0.021
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 370 DQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPG-PNPILPGRGGPND 424
DQ P +P +P+ P G SQ PPL P P P PG P LP G P D
Sbjct: 277 DQAPKVPPTPEPLPLSTPSAGTPQSQPPPLPP---PPPPAPGSAPPALPPEGPPED 329
>gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo
sapiens]
Length = 159
Score = 37.4 bits (85), Expect = 0.028
Identities = 35/99 (35%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 342 TIPFYPNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIP-----GPGETPSQF 396
T F + P PF S PP G P+LP G P ++P GP P
Sbjct: 54 TAAFQQGKIPPTPF--SAPPPA--GAMIPPPPSLP--GPPRPGMMPAPHMGGPPMMPMMG 107
Query: 397 PPLRPRFDPVGPLPGPNPILPGR-----GGPNDRFPFRP 430
PP P PVGP PG P + G G P R P RP
Sbjct: 108 PP-PPGMMPVGPAPGMRPPMGGHMPMMPGPPMMRPPARP 145
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 37.4 bits (85), Expect = 0.028
Identities = 33/91 (36%), Positives = 38/91 (41%), Gaps = 20/91 (21%)
Query: 347 PNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPR--FD 404
P P P PS PP Q P LP +G IP P P+ PP+ P F
Sbjct: 1279 PPPYLPPQQPSLPPPP-------QQPPPLPQLGS-----IPPP---PASAPPVGPHRHFH 1323
Query: 405 PVGPLPGPNPILPGRGGPNDRFPFRPSRGRP 435
GP+PGP GR G R P R + G P
Sbjct: 1324 AHGPVPGPQHYTLGRPG---RAPRRGAGGHP 1351
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 37.4 bits (85), Expect = 0.028
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 349 PLHPRPFPSSRLPPGIIGGEYDQRPTLPYV-GDPISSLIPGPGETPSQFPPLR-----PR 402
P P P PS PP E + PTLP G ++ L+ GP ETP+ P R R
Sbjct: 231 PGSPEPPPS---PPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPTRGPSDTKR 287
Query: 403 FDPVGPLP 410
D GP P
Sbjct: 288 ADVAGPRP 295
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 37.4 bits (85), Expect = 0.028
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 349 PLHPRPFPSSRLPPGIIGGEYDQRPTLPYV-GDPISSLIPGPGETPSQFPPLR-----PR 402
P P P PS PP E + PTLP G ++ L+ GP ETP+ P R R
Sbjct: 231 PGSPEPPPS---PPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPTRGPSDTKR 287
Query: 403 FDPVGPLP 410
D GP P
Sbjct: 288 ADVAGPRP 295
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 37.4 bits (85), Expect = 0.028
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 12/103 (11%)
Query: 337 PSSTHTIPF-YPNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQ 395
PS+ ++P P P P P G+ P++P G P P P PS
Sbjct: 43 PSAPSSVPSGLPPSATPSTVPFGPAPTGMY-------PSVPPTGPPPGPPAPFPPSGPSC 95
Query: 396 FPPLRPRFDPVGPLPGPNPILPGRGGPNDRFPFRP-SRGRPTD 437
PP P P P PGP P PN FP P G PTD
Sbjct: 96 PPPGGPYPAPTVPGPGPTGPYP---TPNMPFPELPRPYGAPTD 135
Score = 37.4 bits (85), Expect = 0.028
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 337 PSSTHTIPFYPNPLHPRPF--PSSRLPPGIIG--GEYDQRPTLPYVGD--PISSL-IPGP 389
P+ + P P P PRP+ P+ G +G G P P +G P ++ P P
Sbjct: 112 PTGPYPTPNMPFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYPSP 171
Query: 390 GETPSQFPPLRPRFDPVGPLPGPNPILPGRGGPNDRFPFRPSRGRPTDG 438
G P+ PP P P P+P + PG GP +P P+ PT G
Sbjct: 172 GPYPAPPPPQAPGAAP--PVPW-GTVPPGAWGPPAPYP-APTGSYPTPG 216
>gi|8922157 proline rich 13 isoform 1 [Homo sapiens]
Length = 148
Score = 37.4 bits (85), Expect = 0.028
Identities = 29/85 (34%), Positives = 34/85 (40%), Gaps = 15/85 (17%)
Query: 344 PFYPNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGP------GETPSQFP 397
P +P P++P PFP PP G P P G P PG G P +P
Sbjct: 26 PAHPPPINP-PFPPGPCPPP--PGAPHGNPAFPPGGPPHPVPQPGYPGCQPLGPYPPPYP 82
Query: 398 PLRPRFDPVGPLPGPNPILPGRGGP 422
P P PV NP+ PG GP
Sbjct: 83 PPAPGIPPV------NPLAPGMVGP 101
Score = 30.8 bits (68), Expect = 2.6
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 367 GEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGP------NPILPGRG 420
G+ P P +G P G P+ PP+ P F P GP P P NP P G
Sbjct: 7 GQPGPNPYPPNIGCP-------GGSNPAHPPPINPPFPP-GPCPPPPGAPHGNPAFPPGG 58
Query: 421 GPN 423
P+
Sbjct: 59 PPH 61
>gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens]
Length = 628
Score = 37.0 bits (84), Expect = 0.036
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 314 KELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRLPPGIIGG---EYD 370
KELYR+R ++ P ++ LP T + P PL P P + L PG + G E D
Sbjct: 58 KELYRRRFPRKTLGPSDLSLLSLPPGTSPVG-SPGPL--APIPPTLLAPGTLLGPKREVD 114
Query: 371 QRPTLPYVGDPISSLIPGP 389
P LP P ++ P P
Sbjct: 115 MHPPLPQPVHPDVTMKPLP 133
>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
Length = 843
Score = 37.0 bits (84), Expect = 0.036
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 256 LPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDF 301
LP E+ L+IF L + + + VC+ +NDP+LW+ LY+ F
Sbjct: 75 LPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVF 120
>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
Length = 686
Score = 37.0 bits (84), Expect = 0.036
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 256 LPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDF 301
LP E+ L+IF L + + + VC+ +NDP+LW+ LY+ F
Sbjct: 75 LPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVF 120
>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
Length = 585
Score = 37.0 bits (84), Expect = 0.036
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 256 LPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDF 301
LP E+ L+IF L + + + VC+ +NDP+LW+ LY+ F
Sbjct: 75 LPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVF 120
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 36.6 bits (83), Expect = 0.047
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 349 PLHPRPFPSSRLPPGIIGGEYDQRPTLPYV-GDPISSLIPGPGETPSQFPPLR-----PR 402
P P P PS PP E + PTLP G ++ L+ GP ETP+ P R R
Sbjct: 231 PGSPEPPPS---PPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPHRGPSDTKR 287
Query: 403 FDPVGPLP 410
D GP P
Sbjct: 288 ADVAGPRP 295
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 36.2 bits (82), Expect = 0.061
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 367 GEYDQRPTLPYVGDPISSLIPGPGETPSQFP-PLRPRFDPVGPLPGPNPILPGRGGPNDR 425
G Q PTLP + PGPG P P P P + + GPN PG G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 426 FPFRPSRGRP 435
P +P G P
Sbjct: 272 MPGQPPGGPP 281
Score = 29.6 bits (65), Expect = 5.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 373 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNP-ILPGRGGPNDRFPFRPS 431
P P G P PGPG +P +GP PGP+P GP+ P PS
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAM---------LGPSPGPSPGSAHSMMGPS---PGPPS 51
Query: 432 RGRP 435
G P
Sbjct: 52 AGHP 55
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 36.2 bits (82), Expect = 0.061
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 367 GEYDQRPTLPYVGDPISSLIPGPGETPSQFP-PLRPRFDPVGPLPGPNPILPGRGGPNDR 425
G Q PTLP + PGPG P P P P + + GPN PG G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 426 FPFRPSRGRP 435
P +P G P
Sbjct: 272 MPGQPPGGPP 281
Score = 29.6 bits (65), Expect = 5.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 373 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNP-ILPGRGGPNDRFPFRPS 431
P P G P PGPG +P +GP PGP+P GP+ P PS
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAM---------LGPSPGPSPGSAHSMMGPS---PGPPS 51
Query: 432 RGRP 435
G P
Sbjct: 52 AGHP 55
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 36.2 bits (82), Expect = 0.061
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 367 GEYDQRPTLPYVGDPISSLIPGPGETPSQFP-PLRPRFDPVGPLPGPNPILPGRGGPNDR 425
G Q PTLP + PGPG P P P P + + GPN PG G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 426 FPFRPSRGRP 435
P +P G P
Sbjct: 272 MPGQPPGGPP 281
Score = 29.6 bits (65), Expect = 5.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 373 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNP-ILPGRGGPNDRFPFRPS 431
P P G P PGPG +P +GP PGP+P GP+ P PS
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAM---------LGPSPGPSPGSAHSMMGPS---PGPPS 51
Query: 432 RGRP 435
G P
Sbjct: 52 AGHP 55
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 36.2 bits (82), Expect = 0.061
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 367 GEYDQRPTLPYVGDPISSLIPGPGETPSQFP-PLRPRFDPVGPLPGPNPILPGRGGPNDR 425
G Q PTLP + PGPG P P P P + + GPN PG G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 426 FPFRPSRGRP 435
P +P G P
Sbjct: 272 MPGQPPGGPP 281
Score = 29.6 bits (65), Expect = 5.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 373 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNP-ILPGRGGPNDRFPFRPS 431
P P G P PGPG +P +GP PGP+P GP+ P PS
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAM---------LGPSPGPSPGSAHSMMGPS---PGPPS 51
Query: 432 RGRP 435
G P
Sbjct: 52 AGHP 55
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 36.2 bits (82), Expect = 0.061
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 367 GEYDQRPTLPYVGDPISSLIPGPGETPSQFP-PLRPRFDPVGPLPGPNPILPGRGGPNDR 425
G Q PTLP + PGPG P P P P + + GPN PG G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 426 FPFRPSRGRP 435
P +P G P
Sbjct: 272 MPGQPPGGPP 281
Score = 29.6 bits (65), Expect = 5.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 373 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNP-ILPGRGGPNDRFPFRPS 431
P P G P PGPG +P +GP PGP+P GP+ P PS
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAM---------LGPSPGPSPGSAHSMMGPS---PGPPS 51
Query: 432 RGRP 435
G P
Sbjct: 52 AGHP 55
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 36.2 bits (82), Expect = 0.061
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 367 GEYDQRPTLPYVGDPISSLIPGPGETPSQFP-PLRPRFDPVGPLPGPNPILPGRGGPNDR 425
G Q PTLP + PGPG P P P P + + GPN PG G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 426 FPFRPSRGRP 435
P +P G P
Sbjct: 272 MPGQPPGGPP 281
Score = 29.6 bits (65), Expect = 5.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 373 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNP-ILPGRGGPNDRFPFRPS 431
P P G P PGPG +P +GP PGP+P GP+ P PS
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAM---------LGPSPGPSPGSAHSMMGPS---PGPPS 51
Query: 432 RGRP 435
G P
Sbjct: 52 AGHP 55
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 36.2 bits (82), Expect = 0.061
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 367 GEYDQRPTLPYVGDPISSLIPGPGETPSQFP-PLRPRFDPVGPLPGPNPILPGRGGPNDR 425
G Q PTLP + PGPG P P P P + + GPN PG G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 426 FPFRPSRGRP 435
P +P G P
Sbjct: 272 MPGQPPGGPP 281
Score = 29.6 bits (65), Expect = 5.7
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 373 PTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPGPNP-ILPGRGGPNDRFPFRPS 431
P P G P PGPG +P +GP PGP+P GP+ P PS
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAM---------LGPSPGPSPGSAHSMMGPS---PGPPS 51
Query: 432 RGRP 435
G P
Sbjct: 52 AGHP 55
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,574,191
Number of Sequences: 37866
Number of extensions: 1225800
Number of successful extensions: 5507
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 4795
Number of HSP's gapped (non-prelim): 914
length of query: 443
length of database: 18,247,518
effective HSP length: 105
effective length of query: 338
effective length of database: 14,271,588
effective search space: 4823796744
effective search space used: 4823796744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.