MMP28 35409

Name: MMP28	Sequence: fasta or formatted (130aa)		NCBI GI: 73808271
Description: matrix metalloproteinase 28 isoform 3		Referenced in: Metalloproteases
Other entries for this name: alt prot [520aa] matrix metalloproteinase 28 isoform 1 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.5 15 2 C cysteine 1.5 2 1 D aspartate 3.8 5 1 E glutamate 6.2 8 1 F phenylalanine 3.8 5 1 G glycine 6.2 8 2 H histidine 2.3 3 1 I isoleucine 1.5 2 1 K lysine 5.4 7 2 L leucine 11.5 15 3 M methionine 2.3 3 1 N asparagine 1.5 2 1 P proline 3.8 5 1 Q glutamine 6.2 8 1 R arginine 12.3 16 2 S serine 4.6 6 1 T threonine 5.4 7 1 V valine 5.4 7 1 W tryptophan 2.3 3 1 Y tyrosine 2.3 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 matrix metalloproteinase 28 isoform 3 MMP28 0.963 matrix metalloproteinase 28 isoform 1 preproprotein ... MMP21 0.125 matrix metalloproteinase 21 preproprotein LOC100289688 0.108 PREDICTED: hypothetical protein XP_002347374 MMP19 0.108 matrix metalloproteinase 19 isoform rasi-1 preproprot... MMP13 0.092 matrix metalloproteinase 13 preproprotein MMP24 0.092 matrix metalloproteinase 24 preproprotein MMP14 0.079 matrix metalloproteinase 14 preproprotein MMP16 0.079 matrix metalloproteinase 16 isoform 2 preproprotein... MMP16 0.079 matrix metalloproteinase 16 isoform 1 preproprotein ... MMP15 0.079 matrix metalloproteinase 15 preproprotein MMP9 0.071 matrix metalloproteinase 9 preproprotein MMP25 0.067 matrix metalloproteinase 25 preproprotein MMP17 0.062 matrix metalloproteinase 17 preproprotein MMP1 0.062 matrix metalloproteinase 1 isoform 1 preproprotein [H... MMP10 0.062 matrix metalloproteinase 10 preproprotein MMP7 0.054 matrix metalloproteinase 7 preproprotein MMP20 0.054 matrix metalloproteinase 20 preproprotein MMP27 0.054 matrix metalloproteinase 27 MMP12 0.050 matrix metalloproteinase 12 preproprotein MMP3 0.046 matrix metalloproteinase 3 preproprotein MMP2 0.033 matrix metalloproteinase 2 isoform b MMP2 0.033 matrix metalloproteinase 2 isoform a preproprotein [... MMP8 0.025 matrix metalloproteinase 8 preproprotein MMP1 0.017 matrix metalloproteinase 1 isoform 2 LSAMP 0.013 limbic system-associated membrane protein SCIN 0.008 scinderin isoform 1 SCIN 0.008 scinderin isoform 2 SNX22 0.008 sorting nexin 22 NHSL1 0.004 NHS-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.