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Search of human proteins with 73808088
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|73808088 zinc finger protein 174 isoform b [Homo sapiens]
(234 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|73808088 zinc finger protein 174 isoform b [Homo sapiens] 479 e-135
gi|4508007 zinc finger protein 174 isoform a [Homo sapiens] 427 e-120
gi|56699475 zinc finger protein 202 [Homo sapiens] 143 1e-34
gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens] 139 2e-33
gi|37622345 zinc finger protein 42 isoform 1 [Homo sapiens] 139 2e-33
gi|57863253 zinc finger protein 500 [Homo sapiens] 138 5e-33
gi|46195755 SCAN domain containing 3 [Homo sapiens] 137 6e-33
gi|254281232 zinc finger and SCAN domain containing 12 [Homo sap... 136 2e-32
gi|109715825 zinc finger protein 690 [Homo sapiens] 135 4e-32
gi|56118254 zinc finger protein 18 [Homo sapiens] 134 9e-32
gi|27544931 zinc finger protein 38 [Homo sapiens] 130 1e-30
gi|4508001 zinc finger protein 165 [Homo sapiens] 127 1e-29
gi|190883486 zinc finger protein 390 [Homo sapiens] 127 1e-29
gi|206597472 zinc finger protein 397 isoform 1 [Homo sapiens] 126 2e-29
gi|14150143 zinc finger protein 397 isoform 2 [Homo sapiens] 126 2e-29
gi|190610012 zinc finger protein 24 [Homo sapiens] 125 2e-29
gi|31543980 zinc finger protein 263 [Homo sapiens] 125 3e-29
gi|41281749 zinc finger protein 323 [Homo sapiens] 124 7e-29
gi|206725432 zinc finger protein 323 [Homo sapiens] 124 7e-29
gi|206725430 zinc finger protein 323 [Homo sapiens] 124 7e-29
gi|206725428 zinc finger protein 323 [Homo sapiens] 124 7e-29
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 123 1e-28
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 123 1e-28
gi|47716687 zinc finger protein 167 isoform 1 [Homo sapiens] 122 2e-28
gi|47716685 zinc finger protein 167 isoform 2 [Homo sapiens] 122 2e-28
gi|171906606 zinc finger with KRAB and SCAN domains 2 [Homo sapi... 122 3e-28
gi|14249386 zinc finger protein 496 [Homo sapiens] 120 1e-27
gi|14210514 piggyBac transposable element derived 1 [Homo sapiens] 120 1e-27
gi|171906553 zinc finger with KRAB and SCAN domains 3 [Homo sapi... 119 2e-27
gi|31982909 zinc finger protein 394 [Homo sapiens] 118 4e-27
>gi|73808088 zinc finger protein 174 isoform b [Homo sapiens]
Length = 234
Score = 479 bits (1232), Expect = e-135
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGP 60
MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGP
Sbjct: 1 MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGP 60
Query: 61 QEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTL 120
QEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTL
Sbjct: 61 QEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTL 120
Query: 121 VEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQ 180
VEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQ
Sbjct: 121 VEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQ 180
Query: 181 AGAYDRLSPHHWEKSPLLQEPTPKLAGTELLIEKTDPNMATDELPCKLWLSFIA 234
AGAYDRLSPHHWEKSPLLQEPTPKLAGTELLIEKTDPNMATDELPCKLWLSFIA
Sbjct: 181 AGAYDRLSPHHWEKSPLLQEPTPKLAGTELLIEKTDPNMATDELPCKLWLSFIA 234
>gi|4508007 zinc finger protein 174 isoform a [Homo sapiens]
Length = 407
Score = 427 bits (1099), Expect = e-120
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGP 60
MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGP
Sbjct: 1 MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGP 60
Query: 61 QEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTL 120
QEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTL
Sbjct: 61 QEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTL 120
Query: 121 VEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQ 180
VEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQ
Sbjct: 121 VEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQ 180
Query: 181 AGAYDRLSPHHWEKSPLLQEPTPKLAGTE 209
AGAYDRLSPHHWEKSPLLQEPTPKLAGTE
Sbjct: 181 AGAYDRLSPHHWEKSPLLQEPTPKLAGTE 209
>gi|56699475 zinc finger protein 202 [Homo sapiens]
Length = 648
Score = 143 bits (360), Expect = 1e-34
Identities = 86/197 (43%), Positives = 120/197 (60%), Gaps = 10/197 (5%)
Query: 18 KQERHIIAKLEE----KRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQ 73
++E ++ KLE+ + LQ++ P E Q+FRRF YQE + P+EAL +LR+LC Q
Sbjct: 14 EEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAASPREALIRLRELCHQ 73
Query: 74 WLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQ 133
WL+PE TKEQILELLV+EQFLT+LP E+Q+ VR + P S +E VTLVE + ++P++
Sbjct: 74 WLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTLVEGLQKQPRRPRR 133
Query: 134 WVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQA---GAYDRLSPH 190
WV V + GQ+VL E+T E E P+ + E SP E +Q+ GA PH
Sbjct: 134 WVTVHVHGQEVLSEETVHLGVEPESPNELQDPVQSSTPEQSPEETTQSPDLGAPAEQRPH 193
Query: 191 HWEKSPLLQE---PTPK 204
E+ LQE P P+
Sbjct: 194 QEEELQTLQESEVPVPE 210
>gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens]
Length = 734
Score = 139 bits (351), Expect = 2e-33
Identities = 88/217 (40%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 9 LSSNTEASSKQERHIIAKLE--EKRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQ 66
L S A + E ++ KLE E+ G + P PE R FR F Y+E +GPQEAL+Q
Sbjct: 6 LGSPDRAPPEDEGPVMVKLEDSEEEGEAALWD-PGPEAARLRFRCFRYEEATGPQEALAQ 64
Query: 67 LRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHR 126
LR+LCRQWL+PE+ +KEQ+LELLV+EQFL LPPEIQARV+ + P S +E LV+ R
Sbjct: 65 LRELCRQWLRPEVRSKEQMLELLVLEQFLGALPPEIQARVQGQRPGSPEEAAALVDGLRR 124
Query: 127 ASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQAGAYDR 186
P++WV V +QGQ+VL EK Q LP+ +P TP E P P +
Sbjct: 125 EPGGPRRWVTVQVQGQEVLSEKM-EPSSFQPLPETEPPTP-----EPGPKTPPRTMQESP 178
Query: 187 LSPHHWEKSPLLQEPTPKLAGTELLIEKTDPNMATDE 223
L E+S + ++ +G +++ P + +E
Sbjct: 179 LGLQVKEESEVTEDSDFLESGPLAATQESVPTLLPEE 215
>gi|37622345 zinc finger protein 42 isoform 1 [Homo sapiens]
Length = 734
Score = 139 bits (351), Expect = 2e-33
Identities = 88/217 (40%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 9 LSSNTEASSKQERHIIAKLE--EKRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQ 66
L S A + E ++ KLE E+ G + P PE R FR F Y+E +GPQEAL+Q
Sbjct: 6 LGSPDRAPPEDEGPVMVKLEDSEEEGEAALWD-PGPEAARLRFRCFRYEEATGPQEALAQ 64
Query: 67 LRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHR 126
LR+LCRQWL+PE+ +KEQ+LELLV+EQFL LPPEIQARV+ + P S +E LV+ R
Sbjct: 65 LRELCRQWLRPEVRSKEQMLELLVLEQFLGALPPEIQARVQGQRPGSPEEAAALVDGLRR 124
Query: 127 ASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQAGAYDR 186
P++WV V +QGQ+VL EK Q LP+ +P TP E P P +
Sbjct: 125 EPGGPRRWVTVQVQGQEVLSEKM-EPSSFQPLPETEPPTP-----EPGPKTPPRTMQESP 178
Query: 187 LSPHHWEKSPLLQEPTPKLAGTELLIEKTDPNMATDE 223
L E+S + ++ +G +++ P + +E
Sbjct: 179 LGLQVKEESEVTEDSDFLESGPLAATQESVPTLLPEE 215
>gi|57863253 zinc finger protein 500 [Homo sapiens]
Length = 480
Score = 138 bits (347), Expect = 5e-33
Identities = 85/196 (43%), Positives = 113/196 (57%), Gaps = 9/196 (4%)
Query: 14 EASSKQERHIIAKLEE----KRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQ 69
E +QE +I K+EE + P ++ P PE RQ FR FCYQEV+GP+EALS+L +
Sbjct: 14 EQDLEQEEILIVKVEEDFCLEEEPSVETEDPSPETFRQLFRLFCYQEVAGPREALSRLWE 73
Query: 70 LCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASK 129
LC +WL+PEL TKEQILELLV+EQFLT+LP EIQARVR + P S +E V LVE R +
Sbjct: 74 LCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQARVREQQPESGEEAVVLVEGLQRKPR 133
Query: 130 KPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQAGAYDRLSP 189
K +Q + + +V L G L Q + + + R SS P+Q + P
Sbjct: 134 KHRQRGSELLSDDEVPLGIGGQFLKHQAEAQPEDLSLEEEARFSSQQPPAQLSHRPQRGP 193
Query: 190 HHW-EKSPLLQEPTPK 204
W E+ P P P+
Sbjct: 194 LLWPERGP----PAPR 205
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 137 bits (346), Expect = 6e-33
Identities = 67/106 (63%), Positives = 83/106 (78%)
Query: 43 ELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEI 102
EL RQ FR+FCYQE GP+EALSQLR+LCRQWL PE+HTKEQILELLV+EQFLTILP E+
Sbjct: 49 ELSRQRFRQFCYQETPGPREALSQLRELCRQWLNPEIHTKEQILELLVLEQFLTILPEEL 108
Query: 103 QARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEK 148
Q+ VR P S +E+VTL+ED R +P+Q V+ GQ+V +E+
Sbjct: 109 QSWVREHNPESGEEVVTLLEDLERELDEPRQQVSQGTYGQEVSMEE 154
>gi|254281232 zinc finger and SCAN domain containing 12 [Homo
sapiens]
Length = 611
Score = 136 bits (342), Expect = 2e-32
Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 7/173 (4%)
Query: 14 EASSKQERHIIAKLEEKRGPPLQ------KNCPDPELCRQSFRRFCYQEVSGPQEALSQL 67
+A Q+ + K+EE++ Q N E+ RQ FR+FCYQE SGP+EALS+L
Sbjct: 8 QAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGPREALSRL 67
Query: 68 RQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRA 127
R+LC QWL+PE HTKEQILELLV+EQFLTILP E+QA V+ + P S +E+VT++ED R
Sbjct: 68 RELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTVLEDLERE 127
Query: 128 SKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQ 180
+P + V+V Q++ L++T +L ++ P Q+ + + SP SQ
Sbjct: 128 LDEPGEQVSVHTGEQEMFLQET-VRLRKEGEPSMSLQSMKAQPKYESPELESQ 179
>gi|109715825 zinc finger protein 690 [Homo sapiens]
Length = 852
Score = 135 bits (339), Expect = 4e-32
Identities = 84/192 (43%), Positives = 118/192 (61%), Gaps = 15/192 (7%)
Query: 35 LQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQF 94
L++N + E RQ FRRF YQEV+GP+EA SQL +LC +WL+PE+ TKEQI+ELLV+EQF
Sbjct: 7 LRENGTNSETFRQRFRRFHYQEVAGPREAFSQLWELCCRWLRPEVRTKEQIVELLVLEQF 66
Query: 95 LTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLG 154
LT+LP EIQ V+ +CP + +E VTLVED R +P+ V V ++GQ+V LEK
Sbjct: 67 LTVLPGEIQNWVQEQCPENGEEAVTLVEDLEREPGRPRSSVTVSVKGQEVRLEKMTPPKS 126
Query: 155 EQEL-----PDFQPQ---TPRRDLRESSPAEP-SQAGAYDRLSPHHWEKSPLLQEPTPKL 205
QEL +PQ P+++ S P Q ++L P +++S L P PK
Sbjct: 127 SQELLSVRQESVEPQPRGVPKKERARSPDLGPQEQMNPKEKLKP--FQRSGL---PFPK- 180
Query: 206 AGTELLIEKTDP 217
+G +E+ +P
Sbjct: 181 SGVVSRLEQGEP 192
>gi|56118254 zinc finger protein 18 [Homo sapiens]
Length = 549
Score = 134 bits (336), Expect = 9e-32
Identities = 76/148 (51%), Positives = 96/148 (64%), Gaps = 6/148 (4%)
Query: 35 LQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQF 94
LQ+ PE RQ FR+F YQ +SGP E L QLR+LC QWLQPE+HTKEQILE+L++EQF
Sbjct: 30 LQEELSSPETARQLFRQFRYQVMSGPHETLKQLRKLCFQWLQPEVHTKEQILEILMLEQF 89
Query: 95 LTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGS--- 151
LTILP EIQ VR +CP S +E VTLVE ++ QW+++ + GQ +L EK S
Sbjct: 90 LTILPGEIQMWVRKQCPGSGEEAVTLVESLKGDPQRLWQWISIQVLGQDILSEKMESPSC 149
Query: 152 QLGEQELPDFQ--PQTPRRDLRESSPAE 177
Q+GE E P + PQ + S P E
Sbjct: 150 QVGEVE-PHLEVVPQELGLENSSSGPGE 176
>gi|27544931 zinc finger protein 38 [Homo sapiens]
Length = 473
Score = 130 bits (327), Expect = 1e-30
Identities = 73/143 (51%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
Query: 23 IIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTK 82
++ K+EEK K P E+ RQ FR+F Y + GP+EALSQLR LC +WL+PE+HTK
Sbjct: 24 LMVKVEEKEEKG--KYLPSLEMFRQRFRQFGYHDTPGPREALSQLRVLCCEWLRPEIHTK 81
Query: 83 EQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQ 142
EQILELLV+EQFLTILP E+QA V+ CP S++E VTL+ED R +P V+ Q
Sbjct: 82 EQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLLEDLERELDEPGHQVSTPPNEQ 141
Query: 143 KVLLEKTGSQLGEQELP-DFQPQ 164
K + EK S +E P QPQ
Sbjct: 142 KPVWEKISSSGTAKESPSSMQPQ 164
>gi|4508001 zinc finger protein 165 [Homo sapiens]
Length = 485
Score = 127 bits (318), Expect = 1e-29
Identities = 68/139 (48%), Positives = 90/139 (64%), Gaps = 6/139 (4%)
Query: 16 SSKQERHIIAKLEEKRGPPLQKNCPD------PELCRQSFRRFCYQEVSGPQEALSQLRQ 69
S + E +I K+EE+ Q C ELCRQ FR+FCYQ+ GP+EALS+LR+
Sbjct: 13 SPEDEGLLIVKIEEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDSPGPREALSRLRE 72
Query: 70 LCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASK 129
LC QWL+PE+HTKEQILELLV+EQFLTILP ++QA V P S +E VT++ED R +
Sbjct: 73 LCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEAVTILEDLERGTD 132
Query: 130 KPKQWVAVCMQGQKVLLEK 148
+ V GQ++ +K
Sbjct: 133 EAVLQVQAHEHGQEIFQKK 151
>gi|190883486 zinc finger protein 390 [Homo sapiens]
Length = 389
Score = 127 bits (318), Expect = 1e-29
Identities = 80/185 (43%), Positives = 111/185 (60%), Gaps = 14/185 (7%)
Query: 5 MEITLSSNTEASSKQERHIIAKLEEKR-----GPP--LQKNCPDP-ELCRQSFRRFCYQE 56
M ITL+ T + QE + K++E+ GP L +N P E+ R+ FR+FCYQE
Sbjct: 1 MAITLTLQT--AEMQEGLLAVKVKEEEEEHSCGPESGLSRNNPHTREIFRRRFRQFCYQE 58
Query: 57 VSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKE 116
GP+EAL +L++LC QWL+PE+HTKEQILELLV+EQFLTILP E+QA VR P+S +E
Sbjct: 59 SPGPREALQRLQELCHQWLRPEMHTKEQILELLVLEQFLTILPEELQAWVRQHRPVSGEE 118
Query: 117 IVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRR----DLRE 172
VT++ED R P + V Q+ +++ + QE + Q QT +LRE
Sbjct: 119 AVTVLEDLERELDDPGEQVLSHAHEQEEFVKEKATPGAAQESSNDQFQTLEEQLGYNLRE 178
Query: 173 SSPAE 177
P +
Sbjct: 179 VCPVQ 183
>gi|206597472 zinc finger protein 397 isoform 1 [Homo sapiens]
Length = 534
Score = 126 bits (316), Expect = 2e-29
Identities = 68/133 (51%), Positives = 82/133 (61%)
Query: 43 ELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEI 102
EL RQ FR+FCYQE GP+EALS+L++LC QWL PELHTKEQILELLV+EQFL+ILP E+
Sbjct: 47 ELFRQQFRKFCYQETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEEL 106
Query: 103 QARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQ 162
Q V+ P S +E VTL+ED R P Q V QG V + QE D
Sbjct: 107 QIWVQQHNPESGEEAVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIH 166
Query: 163 PQTPRRDLRESSP 175
Q + L+ P
Sbjct: 167 LQPLKTQLKSWKP 179
>gi|14150143 zinc finger protein 397 isoform 2 [Homo sapiens]
Length = 275
Score = 126 bits (316), Expect = 2e-29
Identities = 68/133 (51%), Positives = 82/133 (61%)
Query: 43 ELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEI 102
EL RQ FR+FCYQE GP+EALS+L++LC QWL PELHTKEQILELLV+EQFL+ILP E+
Sbjct: 47 ELFRQQFRKFCYQETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEEL 106
Query: 103 QARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQ 162
Q V+ P S +E VTL+ED R P Q V QG V + QE D
Sbjct: 107 QIWVQQHNPESGEEAVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIH 166
Query: 163 PQTPRRDLRESSP 175
Q + L+ P
Sbjct: 167 LQPLKTQLKSWKP 179
>gi|190610012 zinc finger protein 24 [Homo sapiens]
Length = 368
Score = 125 bits (315), Expect = 2e-29
Identities = 72/162 (44%), Positives = 102/162 (62%), Gaps = 5/162 (3%)
Query: 18 KQERHIIAKLEE----KRGPPLQKN-CPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCR 72
++E+ + KLEE + G + N PDPE+ RQ FR+F YQ+ GP+EA+SQLR+LCR
Sbjct: 19 EEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGYQDSPGPREAVSQLRELCR 78
Query: 73 QWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPK 132
WL+PE HTKEQILEL+V+EQF+ ILP E+Q VR P + +E VT++ED P
Sbjct: 79 LWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENGEEAVTVLEDLESELDDPG 138
Query: 133 QWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESS 174
Q V++ + ++VL+E SQ Q LP + L+ +S
Sbjct: 139 QPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWAS 180
>gi|31543980 zinc finger protein 263 [Homo sapiens]
Length = 683
Score = 125 bits (314), Expect = 3e-29
Identities = 89/215 (41%), Positives = 116/215 (53%), Gaps = 10/215 (4%)
Query: 16 SSKQERHIIAKLEE-----KRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQL 70
S ++E +I KLEE + PP P PE FRRF +QE +GP+EALS+L++L
Sbjct: 7 SQEREGLLIVKLEEDCAWSQELPPPDPG-PSPEASHLRFRRFRFQEAAGPREALSRLQEL 65
Query: 71 CRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKK 130
C WL+PE+ TKEQILELLV+EQFLTILP EIQ+RV+ P S +E VTLVED R +
Sbjct: 66 CHGWLRPEMRTKEQILELLVLEQFLTILPQEIQSRVQELHPESGEEAVTLVEDMQRELGR 125
Query: 131 PKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQAGAYDRLSPH 190
+Q V +G +VLLE+ +E P F+ + P R P G + P
Sbjct: 126 LRQQVTNHGRGTEVLLEEPLPLETARESPSFKLE-PMETERSPGPRLQELLGPSPQRDPQ 184
Query: 191 HWEKSPLLQEPTPKLAGTELLIEKTDPNMATDELP 225
K L P L E +E D M +LP
Sbjct: 185 A-VKERALSAPWLSLFPPEGNME--DKEMTGPQLP 216
>gi|41281749 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 124 bits (311), Expect = 7e-29
Identities = 71/138 (51%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 38 NCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTI 97
N E RQ FR+FCYQE GP+EALS+LR+LC QWL+PE+HTKEQILELLV+EQFLTI
Sbjct: 31 NFSGQEASRQLFRQFCYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTI 90
Query: 98 LPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQG-QKVLLEKTGSQLGEQ 156
LP E+QA VR P S +E V +VED + +P G +VLLE +Q
Sbjct: 91 LPEELQAWVREHHPESGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQ 150
Query: 157 ELPDFQPQTPRRDLRESS 174
E D Q Q LR S
Sbjct: 151 EPTDIQLQPMVTQLRYES 168
>gi|206725432 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 124 bits (311), Expect = 7e-29
Identities = 71/138 (51%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 38 NCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTI 97
N E RQ FR+FCYQE GP+EALS+LR+LC QWL+PE+HTKEQILELLV+EQFLTI
Sbjct: 31 NFSGQEASRQLFRQFCYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTI 90
Query: 98 LPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQG-QKVLLEKTGSQLGEQ 156
LP E+QA VR P S +E V +VED + +P G +VLLE +Q
Sbjct: 91 LPEELQAWVREHHPESGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQ 150
Query: 157 ELPDFQPQTPRRDLRESS 174
E D Q Q LR S
Sbjct: 151 EPTDIQLQPMVTQLRYES 168
>gi|206725430 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 124 bits (311), Expect = 7e-29
Identities = 71/138 (51%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 38 NCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTI 97
N E RQ FR+FCYQE GP+EALS+LR+LC QWL+PE+HTKEQILELLV+EQFLTI
Sbjct: 31 NFSGQEASRQLFRQFCYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTI 90
Query: 98 LPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQG-QKVLLEKTGSQLGEQ 156
LP E+QA VR P S +E V +VED + +P G +VLLE +Q
Sbjct: 91 LPEELQAWVREHHPESGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQ 150
Query: 157 ELPDFQPQTPRRDLRESS 174
E D Q Q LR S
Sbjct: 151 EPTDIQLQPMVTQLRYES 168
>gi|206725428 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 124 bits (311), Expect = 7e-29
Identities = 71/138 (51%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 38 NCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTI 97
N E RQ FR+FCYQE GP+EALS+LR+LC QWL+PE+HTKEQILELLV+EQFLTI
Sbjct: 31 NFSGQEASRQLFRQFCYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTI 90
Query: 98 LPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQG-QKVLLEKTGSQLGEQ 156
LP E+QA VR P S +E V +VED + +P G +VLLE +Q
Sbjct: 91 LPEELQAWVREHHPESGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQ 150
Query: 157 ELPDFQPQTPRRDLRESS 174
E D Q Q LR S
Sbjct: 151 EPTDIQLQPMVTQLRYES 168
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 123 bits (309), Expect = 1e-28
Identities = 86/206 (41%), Positives = 110/206 (53%), Gaps = 14/206 (6%)
Query: 7 ITLSSNTEASSKQERHIIAKLEEKRGPPLQK-NCPDPELCRQSFRRFCYQEVSGPQEALS 65
I L E S +QE I K+EE+ +Q+ N P E Q FR F Y E SGP+EALS
Sbjct: 10 IDLDPPAETSQEQEDLFIVKVEEEDCTWMQEYNPPTFETFYQRFRHFQYHEASGPREALS 69
Query: 66 QLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFH 125
QLR LC +WL+PELHTKEQILELLV+EQFLTILP E Q VR P S +E V ++E+
Sbjct: 70 QLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVAVIENIQ 129
Query: 126 RASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQAGAYD 185
R ++ +Q + C VL K + QE P T +P QA
Sbjct: 130 RELEERRQQIVAC---PDVLPRKMATPGAVQESCSPHPLT--------VDTQPEQAPQKP 178
Query: 186 RLSPHHWEKSPLLQEPTPKLAGTELL 211
RL + P+LQ P+ L ++ L
Sbjct: 179 RLLEEN--ALPVLQVPSLPLKDSQEL 202
>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 123 bits (309), Expect = 1e-28
Identities = 86/206 (41%), Positives = 110/206 (53%), Gaps = 14/206 (6%)
Query: 7 ITLSSNTEASSKQERHIIAKLEEKRGPPLQK-NCPDPELCRQSFRRFCYQEVSGPQEALS 65
I L E S +QE I K+EE+ +Q+ N P E Q FR F Y E SGP+EALS
Sbjct: 10 IDLDPPAETSQEQEDLFIVKVEEEDCTWMQEYNPPTFETFYQRFRHFQYHEASGPREALS 69
Query: 66 QLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFH 125
QLR LC +WL+PELHTKEQILELLV+EQFLTILP E Q VR P S +E V ++E+
Sbjct: 70 QLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVAVIENIQ 129
Query: 126 RASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQAGAYD 185
R ++ +Q + C VL K + QE P T +P QA
Sbjct: 130 RELEERRQQIVAC---PDVLPRKMATPGAVQESCSPHPLT--------VDTQPEQAPQKP 178
Query: 186 RLSPHHWEKSPLLQEPTPKLAGTELL 211
RL + P+LQ P+ L ++ L
Sbjct: 179 RLLEEN--ALPVLQVPSLPLKDSQEL 202
>gi|47716687 zinc finger protein 167 isoform 1 [Homo sapiens]
Length = 754
Score = 122 bits (307), Expect = 2e-28
Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 7/168 (4%)
Query: 2 AAKMEITLSSNTEASSKQERHIIAKLEEK-----RGPPLQKNCPDP-ELCRQSFRRFCYQ 55
A + + L + A KQE + K E +G LQKN P E+ R FR+ CY
Sbjct: 4 AGRGNLGLIPRSTAFQKQEGRLTVKQEPANQTWGQGSSLQKNYPPVCEIFRLHFRQLCYH 63
Query: 56 EVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSK 115
E+SGPQEALS+LR+LCR WL PE+HTKEQILELLV+EQFL+ILP E++ V+ P S +
Sbjct: 64 EMSGPQEALSRLRELCRWWLMPEVHTKEQILELLVLEQFLSILPGELRTWVQLHHPESGE 123
Query: 116 EIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQP 163
E V +VEDF R ++ V+ Q Q++ E+T + +E P P
Sbjct: 124 EAVAVVEDFQRHLSGSEE-VSAPAQKQEMHFEETTALGTTKESPPTSP 170
>gi|47716685 zinc finger protein 167 isoform 2 [Homo sapiens]
Length = 276
Score = 122 bits (307), Expect = 2e-28
Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 7/168 (4%)
Query: 2 AAKMEITLSSNTEASSKQERHIIAKLEEK-----RGPPLQKNCPDP-ELCRQSFRRFCYQ 55
A + + L + A KQE + K E +G LQKN P E+ R FR+ CY
Sbjct: 4 AGRGNLGLIPRSTAFQKQEGRLTVKQEPANQTWGQGSSLQKNYPPVCEIFRLHFRQLCYH 63
Query: 56 EVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSK 115
E+SGPQEALS+LR+LCR WL PE+HTKEQILELLV+EQFL+ILP E++ V+ P S +
Sbjct: 64 EMSGPQEALSRLRELCRWWLMPEVHTKEQILELLVLEQFLSILPGELRTWVQLHHPESGE 123
Query: 116 EIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPDFQP 163
E V +VEDF R ++ V+ Q Q++ E+T + +E P P
Sbjct: 124 EAVAVVEDFQRHLSGSEE-VSAPAQKQEMHFEETTALGTTKESPPTSP 170
>gi|171906606 zinc finger with KRAB and SCAN domains 2 [Homo
sapiens]
Length = 967
Score = 122 bits (305), Expect = 3e-28
Identities = 83/229 (36%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 5 MEITLSSNTEASSKQERHIIAKLE---EKRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQ 61
M + L S +A + E +I K+E E P+ + E R+ FR+FCY++V+GP
Sbjct: 1 MAVALDSQIDAPLEVEGCLIMKVEKDPEWASEPILEGSDSSETFRKCFRQFCYEDVTGPH 60
Query: 62 EALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLV 121
EA S+L +LC +WL+PE+ +KEQILELLV+EQFLTILP +IQA + +CP S +E V LV
Sbjct: 61 EAFSKLWELCCRWLKPEMRSKEQILELLVIEQFLTILPEKIQAWAQKQCPQSGEEAVALV 120
Query: 122 EDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQ-ELPDFQPQTPRRDLRESSPAEPS- 179
+ + + +Q V+ + +K S LG E+ DFQP+ R S EP
Sbjct: 121 VHLEKETGRLRQQVSSPVHREK------HSPLGAAWEVADFQPEQVETQPRAVSREEPGS 174
Query: 180 -QAGAYDRLSPHHWEKSPLLQ--EPTPKLAGTELLIEKTDPNMATDELP 225
+G ++L+ E+ PL + P+P + D + T LP
Sbjct: 175 LHSGHQEQLNRKR-ERRPLPKNARPSPWVPALADEWNTLDQEVTTTRLP 222
>gi|14249386 zinc finger protein 496 [Homo sapiens]
Length = 587
Score = 120 bits (301), Expect = 1e-27
Identities = 72/171 (42%), Positives = 97/171 (56%), Gaps = 7/171 (4%)
Query: 33 PPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVME 92
P Q P PE R+ FRRF YQE +GP+EAL +L LC WL+PE HTKEQILELLV+E
Sbjct: 29 PSPQGELPSPESSRRLFRRFRYQEAAGPREALQRLWDLCGGWLRPERHTKEQILELLVLE 88
Query: 93 QFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQ 152
QFL ILP EIQ+ VR + P S ++ V VE R +P QW+ C V+++ S
Sbjct: 89 QFLAILPREIQSWVRAQEPESGEQAVAAVEALEREPGRPWQWLKHC--EDPVVIDDGDSP 146
Query: 153 LGEQELPDFQPQTPRRDLRESSPAEP---SQAGAYDRLSPHHWEKSPLLQE 200
L +++ + P P DL ++ A+P +Q P P+LQ+
Sbjct: 147 LDQEQ--EQLPVEPHSDLAKNQDAQPITLAQCLGLPSRPPSQLSGDPVLQD 195
>gi|14210514 piggyBac transposable element derived 1 [Homo sapiens]
Length = 809
Score = 120 bits (300), Expect = 1e-27
Identities = 76/166 (45%), Positives = 95/166 (57%), Gaps = 19/166 (11%)
Query: 43 ELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEI 102
E+CR FR FCYQE GPQEAL+QLR+LC QWL+PE+HTKEQI+ELLV+EQFLTILP E+
Sbjct: 41 EICRLRFRHFCYQEAHGPQEALAQLRELCHQWLRPEMHTKEQIMELLVLEQFLTILPKEL 100
Query: 103 QARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQK----------VLLEKTGSQ 152
Q V+ S +E VT++E+ S Q +V +QGQ V LE Q
Sbjct: 101 QPCVKTYPLESGEEAVTVLENLETGSGDTGQQASVYIQGQDMHPMVAEYQGVSLECQSLQ 160
Query: 153 L--GEQELPDFQPQTPRRDLRESSPAEPSQAGAYDRLSPHHWEKSP 196
L G L PQ P+ + +E S G S H EK+P
Sbjct: 161 LLPGITTLKCEPPQRPQGNPQEVS-------GPVPHGSAHLQEKNP 199
>gi|171906553 zinc finger with KRAB and SCAN domains 3 [Homo
sapiens]
Length = 538
Score = 119 bits (299), Expect = 2e-27
Identities = 68/148 (45%), Positives = 99/148 (66%), Gaps = 6/148 (4%)
Query: 1 MAAKMEITLSSNTEASSKQERHIIAKLEEKR-GPPLQKNCPD--PELCRQSFRRFCYQEV 57
MA ++ + + + +++ Q ++ K+EE+ G P + PD E R+ FR F Y E
Sbjct: 1 MARELSESTALDAQSTEDQMELLVIKVEEEEAGFP---SSPDLGSEGSRERFRGFRYPEA 57
Query: 58 SGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEI 117
+GP+EALS+LR+LCRQWLQPE+H+KEQILELLV+EQFLTILP +Q+ VR + P S +E+
Sbjct: 58 AGPREALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEV 117
Query: 118 VTLVEDFHRASKKPKQWVAVCMQGQKVL 145
V L+E R +P V+ QGQ++L
Sbjct: 118 VVLLEYLERQLDEPAPQVSGVDQGQELL 145
>gi|31982909 zinc finger protein 394 [Homo sapiens]
Length = 561
Score = 118 bits (296), Expect = 4e-27
Identities = 64/121 (52%), Positives = 82/121 (67%), Gaps = 4/121 (3%)
Query: 11 SNTEASSKQERHIIAKLEEKRGPPLQKN----CPDPELCRQSFRRFCYQEVSGPQEALSQ 66
S A S+++ + K+EE + N PDPE R FR+ YQEV+GP+EALS+
Sbjct: 25 SKDAAPSQRDGLLPVKVEEDSPGSWEPNYPAASPDPETSRLHFRQLRYQEVAGPEEALSR 84
Query: 67 LRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHR 126
LR+LCR+WL+PEL +KEQILELLV+EQFLTILP E+QA VR CP S +E V +V R
Sbjct: 85 LRELCRRWLRPELLSKEQILELLVLEQFLTILPEELQAWVREHCPESGEEAVAVVRALQR 144
Query: 127 A 127
A
Sbjct: 145 A 145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,558,973
Number of Sequences: 37866
Number of extensions: 523126
Number of successful extensions: 1817
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1689
Number of HSP's gapped (non-prelim): 157
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.