Guide to the Human Genome
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Search of human proteins with 71834868

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]
         (357 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens]         729   0.0  
gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]         729   0.0  
gi|31742498 unc-84 homolog B [Homo sapiens]                           194   1e-49
gi|195972890 unc-84 homolog A isoform a [Homo sapiens]                186   2e-47
gi|110227866 unc-84 homolog A isoform b [Homo sapiens]                186   2e-47
gi|21361792 sperm associated antigen 4-like [Homo sapiens]            162   3e-40
gi|11037055 sperm associated antigen 4 [Homo sapiens]                 155   5e-38
gi|4557733 latent transforming growth factor beta binding protei...    35   0.079
gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens]     33   0.39 
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin...    32   1.1  
gi|41872583 Rho-associated, coiled-coil containing protein kinas...    31   1.9  
gi|57768564 hypothetical protein LOC23281 isoform b [Homo sapiens]     30   2.5  
gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens]    30   2.5  
gi|221554543 suppressor of cancer cell invasion isoform 2 [Homo ...    30   3.3  
gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo ...    30   3.3  
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     30   3.3  
gi|34878777 ring finger protein 20 [Homo sapiens]                      30   3.3  
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do...    30   3.3  
gi|42794779 myosin 18A isoform b [Homo sapiens]                        30   4.3  
gi|117414154 sodium channel associated protein 2 isoform b [Homo...    30   4.3  
gi|117414162 sodium channel associated protein 2 isoform a [Homo...    30   4.3  
gi|7662180 glycine-, glutamate-, thienylcyclohexylpiperidine-bin...    30   4.3  
gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subun...    30   4.3  
gi|153945736 keratin 27 [Homo sapiens]                                 29   5.7  
gi|20532340 angiopoietin 1 [Homo sapiens]                              29   5.7  
gi|6912482 leucine zipper-EF-hand containing transmembrane prote...    29   5.7  
gi|118498356 kinectin 1 isoform a [Homo sapiens]                       29   7.4  
gi|33620775 kinectin 1 isoform a [Homo sapiens]                        29   7.4  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    29   7.4  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    29   7.4  

>gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens]
          Length = 357

 Score =  729 bits (1883), Expect = 0.0
 Identities = 357/357 (100%), Positives = 357/357 (100%)

Query: 1   MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL 60
           MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL
Sbjct: 1   MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL 60

Query: 61  VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
           VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF
Sbjct: 61  VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120

Query: 121 RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED 180
           RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED
Sbjct: 121 RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED 180

Query: 181 QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW 240
           QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW
Sbjct: 181 QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW 240

Query: 241 AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL 300
           AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL
Sbjct: 241 AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL 300

Query: 301 GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI 357
           GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI
Sbjct: 301 GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI 357


>gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]
          Length = 357

 Score =  729 bits (1883), Expect = 0.0
 Identities = 357/357 (100%), Positives = 357/357 (100%)

Query: 1   MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL 60
           MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL
Sbjct: 1   MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL 60

Query: 61  VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
           VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF
Sbjct: 61  VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120

Query: 121 RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED 180
           RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED
Sbjct: 121 RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED 180

Query: 181 QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW 240
           QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW
Sbjct: 181 QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW 240

Query: 241 AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL 300
           AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL
Sbjct: 241 AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL 300

Query: 301 GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI 357
           GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI
Sbjct: 301 GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI 357


>gi|31742498 unc-84 homolog B [Homo sapiens]
          Length = 717

 Score =  194 bits (492), Expect = 1e-49
 Identities = 88/190 (46%), Positives = 126/190 (66%)

Query: 164 EEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHE 223
           E+V ++V   L++  ED++ +ADYAL+S GAS+I    SE+Y+   A L   GI    H 
Sbjct: 526 EQVHHIVKQALQRYSEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHS 585

Query: 224 MPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKE 283
             P +ILQPDV+PG CWAF G QG  +++L+ +I PTAVT+EH+ + +SP+  ISSAPK+
Sbjct: 586 QSPRVILQPDVHPGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKD 645

Query: 284 FSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTC 343
           F+++G  +  + E   LG+F Y++ G  +QTF  Q         V+L I +NWGHP+YTC
Sbjct: 646 FAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHFQAPTMATYQVVELRILTNWGHPEYTC 705

Query: 344 LYRFRVHGTP 353
           +YRFRVHG P
Sbjct: 706 IYRFRVHGEP 715


>gi|195972890 unc-84 homolog A isoform a [Homo sapiens]
          Length = 785

 Score =  186 bits (473), Expect = 2e-47
 Identities = 89/188 (47%), Positives = 124/188 (65%), Gaps = 1/188 (0%)

Query: 169 LVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDI 228
           +VN  LK   +D+  M D+AL+S G SI+    SE+Y+   A +   GI        P +
Sbjct: 598 IVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRV 657

Query: 229 ILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYG 288
           ++QPD+YPG CWAF GSQG+ +++L+  I P A T+EHI + +SP+GNISSAPK+F+VYG
Sbjct: 658 VIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYG 717

Query: 289 ITKKCEGEEIFLGQFIYNKTGTTVQTFE-LQHAVSEYLLCVKLNIFSNWGHPKYTCLYRF 347
           +  + + E   LGQF Y++ G ++Q F+ L+         V+L IFSNWGHP+YTCLYRF
Sbjct: 718 LENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRF 777

Query: 348 RVHGTPGK 355
           RVHG P K
Sbjct: 778 RVHGEPVK 785


>gi|110227866 unc-84 homolog A isoform b [Homo sapiens]
          Length = 702

 Score =  186 bits (473), Expect = 2e-47
 Identities = 89/188 (47%), Positives = 124/188 (65%), Gaps = 1/188 (0%)

Query: 169 LVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDI 228
           +VN  LK   +D+  M D+AL+S G SI+    SE+Y+   A +   GI        P +
Sbjct: 515 IVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRV 574

Query: 229 ILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYG 288
           ++QPD+YPG CWAF GSQG+ +++L+  I P A T+EHI + +SP+GNISSAPK+F+VYG
Sbjct: 575 VIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYG 634

Query: 289 ITKKCEGEEIFLGQFIYNKTGTTVQTFE-LQHAVSEYLLCVKLNIFSNWGHPKYTCLYRF 347
           +  + + E   LGQF Y++ G ++Q F+ L+         V+L IFSNWGHP+YTCLYRF
Sbjct: 635 LENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRF 694

Query: 348 RVHGTPGK 355
           RVHG P K
Sbjct: 695 RVHGEPVK 702


>gi|21361792 sperm associated antigen 4-like [Homo sapiens]
          Length = 379

 Score =  162 bits (411), Expect = 3e-40
 Identities = 79/196 (40%), Positives = 123/196 (62%), Gaps = 2/196 (1%)

Query: 157 VEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHG 216
           +++ +   +   +   ++K +  D +E  D+ALKS GASI    TS +Y + KA  YW+ 
Sbjct: 169 LQEMEAMSDEQKMAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNW 228

Query: 217 IGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGN 276
           I   N+  PPD+IL+P+V PG CWAF G +G   I+LA K+  + +T++HI + +S SG+
Sbjct: 229 IQLWNYAQPPDVILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGS 288

Query: 277 ISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNW 336
           + +APK+F +YG+ +    EE+FLG F + +    +Q F LQ+  +     VK+ I SNW
Sbjct: 289 LDTAPKDFVIYGM-EGSPKEEVFLGAFQF-QPENIIQMFPLQNQPARAFSAVKVKISSNW 346

Query: 337 GHPKYTCLYRFRVHGT 352
           G+P +TCLYR RVHG+
Sbjct: 347 GNPGFTCLYRVRVHGS 362


>gi|11037055 sperm associated antigen 4 [Homo sapiens]
          Length = 437

 Score =  155 bits (392), Expect = 5e-38
 Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 4/190 (2%)

Query: 162 HTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLN 221
           ++E V+ LV    ++L ED V   DYAL S GASI    TS  Y +     +W+   F N
Sbjct: 237 NSERVAKLV---FQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWN 293

Query: 222 HEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAP 281
           +  PP +IL+P V+PG CWAF G QG  +I+L  ++  + +T++H    V  +G  +SAP
Sbjct: 294 YARPPTVILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAP 353

Query: 282 KEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKY 341
           ++F+V+G+ +  +  E+ LG+F ++   + +QTF LQ+        VK+ I SNWGHP++
Sbjct: 354 RDFAVFGL-QVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRF 412

Query: 342 TCLYRFRVHG 351
           TCLYR R HG
Sbjct: 413 TCLYRVRAHG 422


>gi|4557733 latent transforming growth factor beta binding protein 2
            [Homo sapiens]
          Length = 1821

 Score = 35.4 bits (80), Expect = 0.079
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 26/150 (17%)

Query: 216  GIGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIK---LATKIIPTAVTMEHISEKVS 272
            G  F N+  P D + +P        AFP + GH+  +   L + + P+ +   +++    
Sbjct: 1673 GAPFYNYLGPEDTVPEP--------AFPNTAGHSADRTPILESPLQPSELQPHYVASHPE 1724

Query: 273  PSGNISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNI 332
            P         E    GI   CE      G+ +  + G T   FE     + ++ CV +N 
Sbjct: 1725 PPAGFEGLQAEEC--GILNGCEN-----GRCVRVREGYTCDCFEGFQLDAAHMACVDVNE 1777

Query: 333  FSNWGHPKYTCLY--------RFRVHGTPG 354
              +   P   C++         +R H +PG
Sbjct: 1778 CDDLNGPAVLCVHGYCENTEGSYRCHCSPG 1807


>gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens]
          Length = 770

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 14/65 (21%), Positives = 37/65 (56%)

Query: 103 KEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDH 162
           KEQ+ L+K++ +  E +  Q + ++ +ID +K+ ++   + +     W+T    +E+   
Sbjct: 84  KEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFK 143

Query: 163 TEEVS 167
           T++++
Sbjct: 144 TQDIA 148


>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
            isoform a [Homo sapiens]
          Length = 1749

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 134  KALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADY 187
            K LL  ++ GMD     N  G  +E+P   EE +   N + K+L ED +    +
Sbjct: 1361 KHLLGLLEVGMDRRAEGNPRGTDLENPREAEEDARPFNALCKRLSEDGISRKSF 1414


>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
           [Homo sapiens]
          Length = 1388

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 103 KEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKD 142
           K+QLE LKK +QN + +  ++  L  Q+D   ALLR   D
Sbjct: 537 KDQLEDLKKRNQNSQISTEKVNQLQRQLDETNALLRTESD 576


>gi|57768564 hypothetical protein LOC23281 isoform b [Homo sapiens]
          Length = 348

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)

Query: 99  LRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVE 158
           L M  +Q+   +K+   LE    + + L E+I VL+    D+K  +D N         V 
Sbjct: 225 LEMKNQQIHEQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQN--------TVV 276

Query: 159 DPDHTEEVSNLVNYVLKKLRE 179
               +EE +NL  YV K+ +E
Sbjct: 277 TRQLSEENANLQEYVEKETQE 297


>gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens]
          Length = 1379

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)

Query: 99   LRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVE 158
            L M  +Q+   +K+   LE    + + L E+I VL+    D+K  +D N         V 
Sbjct: 1256 LEMKNQQIHEQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQN--------TVV 1307

Query: 159  DPDHTEEVSNLVNYVLKKLRE 179
                +EE +NL  YV K+ +E
Sbjct: 1308 TRQLSEENANLQEYVEKETQE 1328


>gi|221554543 suppressor of cancer cell invasion isoform 2 [Homo
           sapiens]
          Length = 606

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 8/143 (5%)

Query: 61  VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
           +G L + +   T       + ++  +    R Y  Q      KE    L  +       F
Sbjct: 130 IGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVN----KEDRPELVVKKLRYYARF 185

Query: 121 RQILFLIEQIDVLKALLRDMKDGM-DNNHNWNTHGDPVEDPDHTEEVSNLV--NYVLKKL 177
             +  L+ ++DV+K L++++ D + D  H +NT  D VE     +EV+  +  + V+   
Sbjct: 186 IVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTE-DQVEWNLVLQEVAAFIEADPVMVLN 244

Query: 178 REDQVEMADYALKSAGASIIEAG 200
            ++ + +    L   GA ++E G
Sbjct: 245 DDNTIVITSNRLAETGAPLLEQG 267


>gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo
           sapiens]
          Length = 629

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 8/143 (5%)

Query: 61  VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
           +G L + +   T       + ++  +    R Y  Q      KE    L  +       F
Sbjct: 153 IGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVN----KEDRPELVVKKLRYYARF 208

Query: 121 RQILFLIEQIDVLKALLRDMKDGM-DNNHNWNTHGDPVEDPDHTEEVSNLV--NYVLKKL 177
             +  L+ ++DV+K L++++ D + D  H +NT  D VE     +EV+  +  + V+   
Sbjct: 209 IVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTE-DQVEWNLVLQEVAAFIEADPVMVLN 267

Query: 178 REDQVEMADYALKSAGASIIEAG 200
            ++ + +    L   GA ++E G
Sbjct: 268 DDNTIVITSNRLAETGAPLLEQG 290


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 17/147 (11%)

Query: 72   TDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQID 131
            T+  +KS+ L  +  ++ + +   + RLR  ++Q + L+K  + LE +      L +QI 
Sbjct: 1009 TEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTD---LSDQIA 1065

Query: 132  VLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKS 191
             L+A + ++K  +          +        EE +   N  LKK+RE         L+S
Sbjct: 1066 ELQAQIAELKMQLAKKEE-----ELQAALARVEEEAAQKNMALKKIRE---------LES 1111

Query: 192  AGASIIEAGTSESYKNNKAKLYWHGIG 218
              + + E   SE    NKA+     +G
Sbjct: 1112 QISELQEDLESERASRNKAEKQKRDLG 1138


>gi|34878777 ring finger protein 20 [Homo sapiens]
          Length = 975

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 103 KEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDH 162
           ++ L  ++KE + L   F Q L   EQ   +   +R +   + N               H
Sbjct: 442 EDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQN---------------H 486

Query: 163 TEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKL 212
             ++   V    +KLRE Q ++    L+S  A +    ++E  K+  A+L
Sbjct: 487 NHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAEL 536


>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
           domain 1 [Homo sapiens]
          Length = 1412

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/73 (21%), Positives = 35/73 (47%)

Query: 63  LLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQ 122
           L   + + E+++  + R+    + +   ++   + RL   KE+LEL +++   L N    
Sbjct: 791 LTQQKEISESNIAYEKRKAKEAMEKEKKKVQDLENRLTKQKEELELKEQKEDVLNNKLSD 850

Query: 123 ILFLIEQIDVLKA 135
            L ++E+    KA
Sbjct: 851 ALAMVEETQKTKA 863


>gi|42794779 myosin 18A isoform b [Homo sapiens]
          Length = 2039

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 79   RQLYAIIAEYGSRLYKYQARLRMPKEQLEL----LKKESQNLENNFRQILFLIEQIDVLK 134
            RQL     E G  L + +A     K +LE+    L+  +Q+L+ + +      ++I  L+
Sbjct: 1878 RQLRDTKEEMGE-LARKEAEASRKKHELEMDLESLEAANQSLQADLK---LAFKRIGDLQ 1933

Query: 135  ALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSA 192
            A + D  +  +N    N+ GD   D +  + V  + +++ K     +    D +LKS+
Sbjct: 1934 AAIEDEMESDENEDLINSEGDSDVDSELEDRVDGVKSWLSKNKGPSKAASDDGSLKSS 1991


>gi|117414154 sodium channel associated protein 2 isoform b [Homo
           sapiens]
          Length = 939

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 83  AIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKD 142
           A+  E      K++  ++  +E++++L ++  +LEN FR  L       V     +D+KD
Sbjct: 513 ALAKEIAKEEKKHEQMIKEYQEKIDVLSQQYMDLENEFRIAL------TVEARRFQDVKD 566

Query: 143 GMDN 146
           G +N
Sbjct: 567 GFEN 570


>gi|117414162 sodium channel associated protein 2 isoform a [Homo
           sapiens]
          Length = 1032

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 83  AIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKD 142
           A+  E      K++  ++  +E++++L ++  +LEN FR  L       V     +D+KD
Sbjct: 606 ALAKEIAKEEKKHEQMIKEYQEKIDVLSQQYMDLENEFRIAL------TVEARRFQDVKD 659

Query: 143 GMDN 146
           G +N
Sbjct: 660 GFEN 663


>gi|7662180 glycine-, glutamate-,
           thienylcyclohexylpiperidine-binding protein [Homo
           sapiens]
          Length = 925

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 73  DVPQKSRQLYAIIAEYGSRL--YKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQI 130
           D  +K +Q  A + + G RL  Y+ + R  + KE  +L K++ Q +E    ++   +E  
Sbjct: 231 DYAKKLKQAIADLQKVGERLGRYEVEKRCAVEKEDYDLAKEKKQQMEQYRAEVYEQLELH 290

Query: 131 DVLKALL 137
            +L A L
Sbjct: 291 SLLDAEL 297


>gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subunit
           [Homo sapiens]
          Length = 1137

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 29/126 (23%)

Query: 45  SWKIILSTMLTLTFLLVGL-LNHQWLKETDVPQKSRQLYAIIAEYGSRLY----KYQARL 99
           +W  +  T   L  LL+G  L+  W  +  +P ++ +L+A    +G  LY    KY   L
Sbjct: 43  AWAFVQKTSALLWLLLLGTSLSPAW-GQAKIPLETVKLWA--DTFGGDLYNTVTKYSGSL 99

Query: 100 RMPKEQ--------------LELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMD 145
            + K+               LEL++K S+++EN  R+      +++ ++ L+   ++  D
Sbjct: 100 LLQKKYKDVESSLKIEEVDGLELVRKFSEDMENMLRR------KVEAVQNLVEAAEEA-D 152

Query: 146 NNHNWN 151
            NH +N
Sbjct: 153 LNHEFN 158


>gi|153945736 keratin 27 [Homo sapiens]
          Length = 459

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 23/189 (12%)

Query: 28  NALLSEDENPDANGVTRSWKIILS---TMLTLTFLLVGLLNHQWLKETDVPQKSRQLYAI 84
           +A L +  + DA   T +   ++    T+ TL   L  LL  +   E  + +        
Sbjct: 283 SASLQQQISDDAGATTSARNELIEMKRTLQTLEIELQSLLATKHSLECSLTETE------ 336

Query: 85  IAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFL---IEQIDVLKALLRDMK 141
            + Y ++L + QA++   +EQL  ++ E++  +  + Q+L +   +E+      LL D +
Sbjct: 337 -SNYCAQLAQIQAQIGALEEQLHQVRTETEGQKLEYEQLLDIKVHLEKEIETYCLLIDGE 395

Query: 142 DG-MDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAG 200
           DG    +  +   G+  +D   T  V  +V         ++++     L S   ++ E  
Sbjct: 396 DGSCSKSKGYGGPGNQTKDSSKTTIVKTVV---------EEIDPRGKVLSSRVHTVEEKS 446

Query: 201 TSESYKNNK 209
           T  + KN +
Sbjct: 447 TKVNNKNEQ 455


>gi|20532340 angiopoietin 1 [Homo sapiens]
          Length = 498

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 10/42 (23%), Positives = 28/42 (66%)

Query: 161 DHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTS 202
           ++T+ +  L NY+++ ++ +  ++   A+++  A+++E GTS
Sbjct: 92  NYTQWLQKLENYIVENMKSEMAQIQQNAVQNHTATMLEIGTS 133


>gi|6912482 leucine zipper-EF-hand containing transmembrane protein
           1 [Homo sapiens]
          Length = 739

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 69  LKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQI 123
           LKE ++   +++   I+++  S+L + +  L   KE+LELLK++ Q+   + ++I
Sbjct: 535 LKEEEI---TKEEIDILSDACSKLQEQKKSLTKEKEELELLKEDVQDYSEDLQEI 586


>gi|118498356 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 28.9 bits (63), Expect = 7.4
 Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 19/127 (14%)

Query: 71   ETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFL---- 126
            +  V Q+  +    + E    + + Q+     +++LE L+ E++++EN  R+   L    
Sbjct: 1154 QRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMEL 1213

Query: 127  ----------IEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKK 176
                      + ++  LK LL +++  +D++++     + V   +    +   +N  L K
Sbjct: 1214 EKAEMERSTYVTEVRELKDLLTELQKKLDDSYS-----EAVRQNEELNLLKAQLNETLTK 1268

Query: 177  LREDQVE 183
            LR +Q E
Sbjct: 1269 LRTEQNE 1275


>gi|33620775 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 28.9 bits (63), Expect = 7.4
 Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 19/127 (14%)

Query: 71   ETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFL---- 126
            +  V Q+  +    + E    + + Q+     +++LE L+ E++++EN  R+   L    
Sbjct: 1154 QRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMEL 1213

Query: 127  ----------IEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKK 176
                      + ++  LK LL +++  +D++++     + V   +    +   +N  L K
Sbjct: 1214 EKAEMERSTYVTEVRELKDLLTELQKKLDDSYS-----EAVRQNEELNLLKAQLNETLTK 1268

Query: 177  LREDQVE 183
            LR +Q E
Sbjct: 1269 LRTEQNE 1275


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 28.9 bits (63), Expect = 7.4
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 26/76 (34%)

Query: 94   KYQARLRMPKEQLELLKKESQNLE-----------------NNFRQILFLIEQID----- 131
            +YQA L    EQ++ L++E Q+LE                  NF+ +   I+++D     
Sbjct: 3670 RYQALLLQVLEQIKFLEEEIQSLEESESSLSSYSDWYGSTHKNFKNVATKIDKVDTVMMG 3729

Query: 132  ----VLKALLRDMKDG 143
                 L+ LL+DM+ G
Sbjct: 3730 KKLKTLEVLLKDMEKG 3745


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 28.9 bits (63), Expect = 7.4
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 26/76 (34%)

Query: 94   KYQARLRMPKEQLELLKKESQNLE-----------------NNFRQILFLIEQID----- 131
            +YQA L    EQ++ L++E Q+LE                  NF+ +   I+++D     
Sbjct: 3685 RYQALLLQVLEQIKFLEEEIQSLEESESSLSSYSDWYGSTHKNFKNVATKIDKVDTVMMG 3744

Query: 132  ----VLKALLRDMKDG 143
                 L+ LL+DM+ G
Sbjct: 3745 KKLKTLEVLLKDMEKG 3760


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,024,779
Number of Sequences: 37866
Number of extensions: 603681
Number of successful extensions: 1805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1766
Number of HSP's gapped (non-prelim): 66
length of query: 357
length of database: 18,247,518
effective HSP length: 103
effective length of query: 254
effective length of database: 14,347,320
effective search space: 3644219280
effective search space used: 3644219280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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