Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 71834868
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]
(357 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens] 729 0.0
gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens] 729 0.0
gi|31742498 unc-84 homolog B [Homo sapiens] 194 1e-49
gi|195972890 unc-84 homolog A isoform a [Homo sapiens] 186 2e-47
gi|110227866 unc-84 homolog A isoform b [Homo sapiens] 186 2e-47
gi|21361792 sperm associated antigen 4-like [Homo sapiens] 162 3e-40
gi|11037055 sperm associated antigen 4 [Homo sapiens] 155 5e-38
gi|4557733 latent transforming growth factor beta binding protei... 35 0.079
gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens] 33 0.39
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 32 1.1
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 31 1.9
gi|57768564 hypothetical protein LOC23281 isoform b [Homo sapiens] 30 2.5
gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens] 30 2.5
gi|221554543 suppressor of cancer cell invasion isoform 2 [Homo ... 30 3.3
gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo ... 30 3.3
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 30 3.3
gi|34878777 ring finger protein 20 [Homo sapiens] 30 3.3
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 30 3.3
gi|42794779 myosin 18A isoform b [Homo sapiens] 30 4.3
gi|117414154 sodium channel associated protein 2 isoform b [Homo... 30 4.3
gi|117414162 sodium channel associated protein 2 isoform a [Homo... 30 4.3
gi|7662180 glycine-, glutamate-, thienylcyclohexylpiperidine-bin... 30 4.3
gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subun... 30 4.3
gi|153945736 keratin 27 [Homo sapiens] 29 5.7
gi|20532340 angiopoietin 1 [Homo sapiens] 29 5.7
gi|6912482 leucine zipper-EF-hand containing transmembrane prote... 29 5.7
gi|118498356 kinectin 1 isoform a [Homo sapiens] 29 7.4
gi|33620775 kinectin 1 isoform a [Homo sapiens] 29 7.4
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 29 7.4
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 29 7.4
>gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens]
Length = 357
Score = 729 bits (1883), Expect = 0.0
Identities = 357/357 (100%), Positives = 357/357 (100%)
Query: 1 MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL 60
MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL
Sbjct: 1 MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL 60
Query: 61 VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF
Sbjct: 61 VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
Query: 121 RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED 180
RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED
Sbjct: 121 RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED 180
Query: 181 QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW 240
QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW
Sbjct: 181 QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW 240
Query: 241 AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL 300
AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL
Sbjct: 241 AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL 300
Query: 301 GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI 357
GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI
Sbjct: 301 GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI 357
>gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]
Length = 357
Score = 729 bits (1883), Expect = 0.0
Identities = 357/357 (100%), Positives = 357/357 (100%)
Query: 1 MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL 60
MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL
Sbjct: 1 MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLL 60
Query: 61 VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF
Sbjct: 61 VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
Query: 121 RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED 180
RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED
Sbjct: 121 RQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLRED 180
Query: 181 QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW 240
QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW
Sbjct: 181 QVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCW 240
Query: 241 AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL 300
AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL
Sbjct: 241 AFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFL 300
Query: 301 GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI 357
GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI
Sbjct: 301 GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI 357
>gi|31742498 unc-84 homolog B [Homo sapiens]
Length = 717
Score = 194 bits (492), Expect = 1e-49
Identities = 88/190 (46%), Positives = 126/190 (66%)
Query: 164 EEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHE 223
E+V ++V L++ ED++ +ADYAL+S GAS+I SE+Y+ A L GI H
Sbjct: 526 EQVHHIVKQALQRYSEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHS 585
Query: 224 MPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKE 283
P +ILQPDV+PG CWAF G QG +++L+ +I PTAVT+EH+ + +SP+ ISSAPK+
Sbjct: 586 QSPRVILQPDVHPGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKD 645
Query: 284 FSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTC 343
F+++G + + E LG+F Y++ G +QTF Q V+L I +NWGHP+YTC
Sbjct: 646 FAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHFQAPTMATYQVVELRILTNWGHPEYTC 705
Query: 344 LYRFRVHGTP 353
+YRFRVHG P
Sbjct: 706 IYRFRVHGEP 715
>gi|195972890 unc-84 homolog A isoform a [Homo sapiens]
Length = 785
Score = 186 bits (473), Expect = 2e-47
Identities = 89/188 (47%), Positives = 124/188 (65%), Gaps = 1/188 (0%)
Query: 169 LVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDI 228
+VN LK +D+ M D+AL+S G SI+ SE+Y+ A + GI P +
Sbjct: 598 IVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRV 657
Query: 229 ILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYG 288
++QPD+YPG CWAF GSQG+ +++L+ I P A T+EHI + +SP+GNISSAPK+F+VYG
Sbjct: 658 VIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYG 717
Query: 289 ITKKCEGEEIFLGQFIYNKTGTTVQTFE-LQHAVSEYLLCVKLNIFSNWGHPKYTCLYRF 347
+ + + E LGQF Y++ G ++Q F+ L+ V+L IFSNWGHP+YTCLYRF
Sbjct: 718 LENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRF 777
Query: 348 RVHGTPGK 355
RVHG P K
Sbjct: 778 RVHGEPVK 785
>gi|110227866 unc-84 homolog A isoform b [Homo sapiens]
Length = 702
Score = 186 bits (473), Expect = 2e-47
Identities = 89/188 (47%), Positives = 124/188 (65%), Gaps = 1/188 (0%)
Query: 169 LVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLNHEMPPDI 228
+VN LK +D+ M D+AL+S G SI+ SE+Y+ A + GI P +
Sbjct: 515 IVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRV 574
Query: 229 ILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAPKEFSVYG 288
++QPD+YPG CWAF GSQG+ +++L+ I P A T+EHI + +SP+GNISSAPK+F+VYG
Sbjct: 575 VIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYG 634
Query: 289 ITKKCEGEEIFLGQFIYNKTGTTVQTFE-LQHAVSEYLLCVKLNIFSNWGHPKYTCLYRF 347
+ + + E LGQF Y++ G ++Q F+ L+ V+L IFSNWGHP+YTCLYRF
Sbjct: 635 LENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRF 694
Query: 348 RVHGTPGK 355
RVHG P K
Sbjct: 695 RVHGEPVK 702
>gi|21361792 sperm associated antigen 4-like [Homo sapiens]
Length = 379
Score = 162 bits (411), Expect = 3e-40
Identities = 79/196 (40%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 157 VEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHG 216
+++ + + + ++K + D +E D+ALKS GASI TS +Y + KA YW+
Sbjct: 169 LQEMEAMSDEQKMAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNW 228
Query: 217 IGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGN 276
I N+ PPD+IL+P+V PG CWAF G +G I+LA K+ + +T++HI + +S SG+
Sbjct: 229 IQLWNYAQPPDVILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGS 288
Query: 277 ISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNW 336
+ +APK+F +YG+ + EE+FLG F + + +Q F LQ+ + VK+ I SNW
Sbjct: 289 LDTAPKDFVIYGM-EGSPKEEVFLGAFQF-QPENIIQMFPLQNQPARAFSAVKVKISSNW 346
Query: 337 GHPKYTCLYRFRVHGT 352
G+P +TCLYR RVHG+
Sbjct: 347 GNPGFTCLYRVRVHGS 362
>gi|11037055 sperm associated antigen 4 [Homo sapiens]
Length = 437
Score = 155 bits (392), Expect = 5e-38
Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 4/190 (2%)
Query: 162 HTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLN 221
++E V+ LV ++L ED V DYAL S GASI TS Y + +W+ F N
Sbjct: 237 NSERVAKLV---FQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWN 293
Query: 222 HEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAP 281
+ PP +IL+P V+PG CWAF G QG +I+L ++ + +T++H V +G +SAP
Sbjct: 294 YARPPTVILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAP 353
Query: 282 KEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKY 341
++F+V+G+ + + E+ LG+F ++ + +QTF LQ+ VK+ I SNWGHP++
Sbjct: 354 RDFAVFGL-QVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRF 412
Query: 342 TCLYRFRVHG 351
TCLYR R HG
Sbjct: 413 TCLYRVRAHG 422
>gi|4557733 latent transforming growth factor beta binding protein 2
[Homo sapiens]
Length = 1821
Score = 35.4 bits (80), Expect = 0.079
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 26/150 (17%)
Query: 216 GIGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIK---LATKIIPTAVTMEHISEKVS 272
G F N+ P D + +P AFP + GH+ + L + + P+ + +++
Sbjct: 1673 GAPFYNYLGPEDTVPEP--------AFPNTAGHSADRTPILESPLQPSELQPHYVASHPE 1724
Query: 273 PSGNISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNI 332
P E GI CE G+ + + G T FE + ++ CV +N
Sbjct: 1725 PPAGFEGLQAEEC--GILNGCEN-----GRCVRVREGYTCDCFEGFQLDAAHMACVDVNE 1777
Query: 333 FSNWGHPKYTCLY--------RFRVHGTPG 354
+ P C++ +R H +PG
Sbjct: 1778 CDDLNGPAVLCVHGYCENTEGSYRCHCSPG 1807
>gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens]
Length = 770
Score = 33.1 bits (74), Expect = 0.39
Identities = 14/65 (21%), Positives = 37/65 (56%)
Query: 103 KEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDH 162
KEQ+ L+K++ + E + Q + ++ +ID +K+ ++ + + W+T +E+
Sbjct: 84 KEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFK 143
Query: 163 TEEVS 167
T++++
Sbjct: 144 TQDIA 148
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 31.6 bits (70), Expect = 1.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 134 KALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADY 187
K LL ++ GMD N G +E+P EE + N + K+L ED + +
Sbjct: 1361 KHLLGLLEVGMDRRAEGNPRGTDLENPREAEEDARPFNALCKRLSEDGISRKSF 1414
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 30.8 bits (68), Expect = 1.9
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 103 KEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKD 142
K+QLE LKK +QN + + ++ L Q+D ALLR D
Sbjct: 537 KDQLEDLKKRNQNSQISTEKVNQLQRQLDETNALLRTESD 576
>gi|57768564 hypothetical protein LOC23281 isoform b [Homo sapiens]
Length = 348
Score = 30.4 bits (67), Expect = 2.5
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 99 LRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVE 158
L M +Q+ +K+ LE + + L E+I VL+ D+K +D N V
Sbjct: 225 LEMKNQQIHEQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQN--------TVV 276
Query: 159 DPDHTEEVSNLVNYVLKKLRE 179
+EE +NL YV K+ +E
Sbjct: 277 TRQLSEENANLQEYVEKETQE 297
>gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens]
Length = 1379
Score = 30.4 bits (67), Expect = 2.5
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 99 LRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVE 158
L M +Q+ +K+ LE + + L E+I VL+ D+K +D N V
Sbjct: 1256 LEMKNQQIHEQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQN--------TVV 1307
Query: 159 DPDHTEEVSNLVNYVLKKLRE 179
+EE +NL YV K+ +E
Sbjct: 1308 TRQLSEENANLQEYVEKETQE 1328
>gi|221554543 suppressor of cancer cell invasion isoform 2 [Homo
sapiens]
Length = 606
Score = 30.0 bits (66), Expect = 3.3
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 61 VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
+G L + + T + ++ + R Y Q KE L + F
Sbjct: 130 IGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVN----KEDRPELVVKKLRYYARF 185
Query: 121 RQILFLIEQIDVLKALLRDMKDGM-DNNHNWNTHGDPVEDPDHTEEVSNLV--NYVLKKL 177
+ L+ ++DV+K L++++ D + D H +NT D VE +EV+ + + V+
Sbjct: 186 IVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTE-DQVEWNLVLQEVAAFIEADPVMVLN 244
Query: 178 REDQVEMADYALKSAGASIIEAG 200
++ + + L GA ++E G
Sbjct: 245 DDNTIVITSNRLAETGAPLLEQG 267
>gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo
sapiens]
Length = 629
Score = 30.0 bits (66), Expect = 3.3
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 61 VGLLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNF 120
+G L + + T + ++ + R Y Q KE L + F
Sbjct: 153 IGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVN----KEDRPELVVKKLRYYARF 208
Query: 121 RQILFLIEQIDVLKALLRDMKDGM-DNNHNWNTHGDPVEDPDHTEEVSNLV--NYVLKKL 177
+ L+ ++DV+K L++++ D + D H +NT D VE +EV+ + + V+
Sbjct: 209 IVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTE-DQVEWNLVLQEVAAFIEADPVMVLN 267
Query: 178 REDQVEMADYALKSAGASIIEAG 200
++ + + L GA ++E G
Sbjct: 268 DDNTIVITSNRLAETGAPLLEQG 290
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 30.0 bits (66), Expect = 3.3
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 72 TDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQID 131
T+ +KS+ L + ++ + + + RLR ++Q + L+K + LE + L +QI
Sbjct: 1009 TEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTD---LSDQIA 1065
Query: 132 VLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKS 191
L+A + ++K + + EE + N LKK+RE L+S
Sbjct: 1066 ELQAQIAELKMQLAKKEE-----ELQAALARVEEEAAQKNMALKKIRE---------LES 1111
Query: 192 AGASIIEAGTSESYKNNKAKLYWHGIG 218
+ + E SE NKA+ +G
Sbjct: 1112 QISELQEDLESERASRNKAEKQKRDLG 1138
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 30.0 bits (66), Expect = 3.3
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 15/110 (13%)
Query: 103 KEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDH 162
++ L ++KE + L F Q L EQ + +R + + N H
Sbjct: 442 EDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQN---------------H 486
Query: 163 TEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKL 212
++ V +KLRE Q ++ L+S A + ++E K+ A+L
Sbjct: 487 NHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAEL 536
>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
domain 1 [Homo sapiens]
Length = 1412
Score = 30.0 bits (66), Expect = 3.3
Identities = 16/73 (21%), Positives = 35/73 (47%)
Query: 63 LLNHQWLKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQ 122
L + + E+++ + R+ + + ++ + RL KE+LEL +++ L N
Sbjct: 791 LTQQKEISESNIAYEKRKAKEAMEKEKKKVQDLENRLTKQKEELELKEQKEDVLNNKLSD 850
Query: 123 ILFLIEQIDVLKA 135
L ++E+ KA
Sbjct: 851 ALAMVEETQKTKA 863
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 29.6 bits (65), Expect = 4.3
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 79 RQLYAIIAEYGSRLYKYQARLRMPKEQLEL----LKKESQNLENNFRQILFLIEQIDVLK 134
RQL E G L + +A K +LE+ L+ +Q+L+ + + ++I L+
Sbjct: 1878 RQLRDTKEEMGE-LARKEAEASRKKHELEMDLESLEAANQSLQADLK---LAFKRIGDLQ 1933
Query: 135 ALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSA 192
A + D + +N N+ GD D + + V + +++ K + D +LKS+
Sbjct: 1934 AAIEDEMESDENEDLINSEGDSDVDSELEDRVDGVKSWLSKNKGPSKAASDDGSLKSS 1991
>gi|117414154 sodium channel associated protein 2 isoform b [Homo
sapiens]
Length = 939
Score = 29.6 bits (65), Expect = 4.3
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 83 AIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKD 142
A+ E K++ ++ +E++++L ++ +LEN FR L V +D+KD
Sbjct: 513 ALAKEIAKEEKKHEQMIKEYQEKIDVLSQQYMDLENEFRIAL------TVEARRFQDVKD 566
Query: 143 GMDN 146
G +N
Sbjct: 567 GFEN 570
>gi|117414162 sodium channel associated protein 2 isoform a [Homo
sapiens]
Length = 1032
Score = 29.6 bits (65), Expect = 4.3
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 83 AIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKD 142
A+ E K++ ++ +E++++L ++ +LEN FR L V +D+KD
Sbjct: 606 ALAKEIAKEEKKHEQMIKEYQEKIDVLSQQYMDLENEFRIAL------TVEARRFQDVKD 659
Query: 143 GMDN 146
G +N
Sbjct: 660 GFEN 663
>gi|7662180 glycine-, glutamate-,
thienylcyclohexylpiperidine-binding protein [Homo
sapiens]
Length = 925
Score = 29.6 bits (65), Expect = 4.3
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 73 DVPQKSRQLYAIIAEYGSRL--YKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQI 130
D +K +Q A + + G RL Y+ + R + KE +L K++ Q +E ++ +E
Sbjct: 231 DYAKKLKQAIADLQKVGERLGRYEVEKRCAVEKEDYDLAKEKKQQMEQYRAEVYEQLELH 290
Query: 131 DVLKALL 137
+L A L
Sbjct: 291 SLLDAEL 297
>gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subunit
[Homo sapiens]
Length = 1137
Score = 29.6 bits (65), Expect = 4.3
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 29/126 (23%)
Query: 45 SWKIILSTMLTLTFLLVGL-LNHQWLKETDVPQKSRQLYAIIAEYGSRLY----KYQARL 99
+W + T L LL+G L+ W + +P ++ +L+A +G LY KY L
Sbjct: 43 AWAFVQKTSALLWLLLLGTSLSPAW-GQAKIPLETVKLWA--DTFGGDLYNTVTKYSGSL 99
Query: 100 RMPKEQ--------------LELLKKESQNLENNFRQILFLIEQIDVLKALLRDMKDGMD 145
+ K+ LEL++K S+++EN R+ +++ ++ L+ ++ D
Sbjct: 100 LLQKKYKDVESSLKIEEVDGLELVRKFSEDMENMLRR------KVEAVQNLVEAAEEA-D 152
Query: 146 NNHNWN 151
NH +N
Sbjct: 153 LNHEFN 158
>gi|153945736 keratin 27 [Homo sapiens]
Length = 459
Score = 29.3 bits (64), Expect = 5.7
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 23/189 (12%)
Query: 28 NALLSEDENPDANGVTRSWKIILS---TMLTLTFLLVGLLNHQWLKETDVPQKSRQLYAI 84
+A L + + DA T + ++ T+ TL L LL + E + +
Sbjct: 283 SASLQQQISDDAGATTSARNELIEMKRTLQTLEIELQSLLATKHSLECSLTETE------ 336
Query: 85 IAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFL---IEQIDVLKALLRDMK 141
+ Y ++L + QA++ +EQL ++ E++ + + Q+L + +E+ LL D +
Sbjct: 337 -SNYCAQLAQIQAQIGALEEQLHQVRTETEGQKLEYEQLLDIKVHLEKEIETYCLLIDGE 395
Query: 142 DG-MDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAG 200
DG + + G+ +D T V +V ++++ L S ++ E
Sbjct: 396 DGSCSKSKGYGGPGNQTKDSSKTTIVKTVV---------EEIDPRGKVLSSRVHTVEEKS 446
Query: 201 TSESYKNNK 209
T + KN +
Sbjct: 447 TKVNNKNEQ 455
>gi|20532340 angiopoietin 1 [Homo sapiens]
Length = 498
Score = 29.3 bits (64), Expect = 5.7
Identities = 10/42 (23%), Positives = 28/42 (66%)
Query: 161 DHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTS 202
++T+ + L NY+++ ++ + ++ A+++ A+++E GTS
Sbjct: 92 NYTQWLQKLENYIVENMKSEMAQIQQNAVQNHTATMLEIGTS 133
>gi|6912482 leucine zipper-EF-hand containing transmembrane protein
1 [Homo sapiens]
Length = 739
Score = 29.3 bits (64), Expect = 5.7
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 69 LKETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQI 123
LKE ++ +++ I+++ S+L + + L KE+LELLK++ Q+ + ++I
Sbjct: 535 LKEEEI---TKEEIDILSDACSKLQEQKKSLTKEKEELELLKEDVQDYSEDLQEI 586
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 28.9 bits (63), Expect = 7.4
Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 71 ETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFL---- 126
+ V Q+ + + E + + Q+ +++LE L+ E++++EN R+ L
Sbjct: 1154 QRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMEL 1213
Query: 127 ----------IEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKK 176
+ ++ LK LL +++ +D++++ + V + + +N L K
Sbjct: 1214 EKAEMERSTYVTEVRELKDLLTELQKKLDDSYS-----EAVRQNEELNLLKAQLNETLTK 1268
Query: 177 LREDQVE 183
LR +Q E
Sbjct: 1269 LRTEQNE 1275
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 28.9 bits (63), Expect = 7.4
Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 71 ETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFL---- 126
+ V Q+ + + E + + Q+ +++LE L+ E++++EN R+ L
Sbjct: 1154 QRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMEL 1213
Query: 127 ----------IEQIDVLKALLRDMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKK 176
+ ++ LK LL +++ +D++++ + V + + +N L K
Sbjct: 1214 EKAEMERSTYVTEVRELKDLLTELQKKLDDSYS-----EAVRQNEELNLLKAQLNETLTK 1268
Query: 177 LREDQVE 183
LR +Q E
Sbjct: 1269 LRTEQNE 1275
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 28.9 bits (63), Expect = 7.4
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 26/76 (34%)
Query: 94 KYQARLRMPKEQLELLKKESQNLE-----------------NNFRQILFLIEQID----- 131
+YQA L EQ++ L++E Q+LE NF+ + I+++D
Sbjct: 3670 RYQALLLQVLEQIKFLEEEIQSLEESESSLSSYSDWYGSTHKNFKNVATKIDKVDTVMMG 3729
Query: 132 ----VLKALLRDMKDG 143
L+ LL+DM+ G
Sbjct: 3730 KKLKTLEVLLKDMEKG 3745
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 28.9 bits (63), Expect = 7.4
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 26/76 (34%)
Query: 94 KYQARLRMPKEQLELLKKESQNLE-----------------NNFRQILFLIEQID----- 131
+YQA L EQ++ L++E Q+LE NF+ + I+++D
Sbjct: 3685 RYQALLLQVLEQIKFLEEEIQSLEESESSLSSYSDWYGSTHKNFKNVATKIDKVDTVMMG 3744
Query: 132 ----VLKALLRDMKDG 143
L+ LL+DM+ G
Sbjct: 3745 KKLKTLEVLLKDMEKG 3760
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,024,779
Number of Sequences: 37866
Number of extensions: 603681
Number of successful extensions: 1805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1766
Number of HSP's gapped (non-prelim): 66
length of query: 357
length of database: 18,247,518
effective HSP length: 103
effective length of query: 254
effective length of database: 14,347,320
effective search space: 3644219280
effective search space used: 3644219280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.