Guide to the Human Genome
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Name: SPAG4L Sequence: fasta or formatted (379aa) NCBI GI: 21361792
Description:

sperm associated antigen 4-like

Referenced in:

Nucleus and Nucleolus
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         23           1
 C cysteine            2.6         10           1
 D aspartate           4.5         17           2
 E glutamate           4.7         18           2
 F phenylalanine       4.2         16           1
 G glycine             5.8         22           1
 H histidine           2.9         11           2
 I isoleucine          5.5         21           2
 K lysine              5.3         20           1
 L leucine             9.0         34           3
 M methionine          4.0         15           1
 N asparagine          5.5         21           2
 P proline             6.9         26           2
 Q glutamine           7.4         28           2
 R arginine            5.3         20           2
 S serine              7.1         27           2
 T threonine           4.0         15           1
 V valine              4.7         18           1
 W tryptophan          2.1          8           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sperm associated antigen 4-like 
SPAG4                 0.259   sperm associated antigen 4 
SUNC1                 0.179   Sad1 and UNC84 domain containing 1 
SUNC1                 0.179   Sad1 and UNC84 domain containing 1 
UNC84A                0.163   unc-84 homolog A isoform a 
UNC84A                0.163   unc-84 homolog A isoform b 
UNC84B                0.150   unc-84 homolog B 
C1orf9                0.017   chromosome 1 open reading frame 9 protein isoform 2...
TRIP11                0.016   thyroid hormone receptor interactor 11 
CENPF                 0.014   centromere protein F 
C1orf9                0.014   chromosome 1 open reading frame 9 protein isoform 1 [...
HOOK1                 0.010   hook homolog 1 
SRFBP1                0.010   serum response factor binding protein 1 
EPS15L1               0.008   epidermal growth factor receptor pathway substrate 1...
LOC283767             0.007   golgi autoantigen, golgin subfamily a-like 
PHF21A                0.007   BRAF35/HDAC2 complex isoform b 
PHF21A                0.007   BRAF35/HDAC2 complex isoform a 
GOLGA5                0.007   Golgi autoantigen, golgin subfamily a, 5 
LOC440243             0.007   PREDICTED: Putative golgin subfamily A member 6-lik...
EYS                   0.007   eyes shut homolog isoform 1 
EPS15                 0.005   epidermal growth factor receptor pathway substrate ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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