Guide to the Human Genome
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Name: KIAA0562 Sequence: fasta or formatted (925aa) NCBI GI: 7662180
Description:

glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         82           2
 C cysteine            2.2         20           1
 D aspartate           5.0         46           2
 E glutamate           9.0         83           2
 F phenylalanine       2.9         27           1
 G glycine             4.8         44           2
 H histidine           3.0         28           1
 I isoleucine          5.1         47           2
 K lysine              8.0         74           2
 L leucine            10.3         95           2
 M methionine          2.4         22           1
 N asparagine          2.5         23           1
 P proline             5.6         52           2
 Q glutamine           4.5         42           2
 R arginine            6.1         56           2
 S serine              7.2         67           3
 T threonine           3.7         34           1
 V valine              5.0         46           3
 W tryptophan          0.4          4           1
 Y tyrosine            3.6         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycine-, glutamate-, thienylcyclohexylpiperidine-bin... 
RAB3IP                0.009   RAB3A interacting protein isoform beta 2 
RAB3IP                0.009   RAB3A interacting protein isoform beta 1 
RAB3IP                0.009   RAB3A interacting protein isoform alpha 2 
RAB3IP                0.009   RAB3A interacting protein isoform alpha 1 
SUDS3                 0.008   suppressor of defective silencing 3 
CCDC153               0.007   coiled-coil domain containing 153 
RRP12                 0.007   ribosomal RNA processing 12 homolog isoform 2 [Homo...
RRP12                 0.007   ribosomal RNA processing 12 homolog isoform 1 [Homo...
STAMBP                0.007   STAM binding protein 
STAMBP                0.007   STAM binding protein 
STAMBP                0.007   STAM binding protein 
FHL5                  0.007   activator of cAMP-responsive element modulator (CREM...
SH3GL1                0.007   SH3-domain GRB2-like 1 
UNKL                  0.007   unkempt homolog (Drosophila)-like isoform 1 
DIAPH1                0.005   diaphanous 1 isoform 2 
DIAPH1                0.005   diaphanous 1 isoform 1 
AMOTL1                0.005   angiomotin like 1 
TNIK                  0.005   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.005   TRAF2 and NCK interacting kinase isoform 3 
SMC1B                 0.005   SMC1 structural maintenance of chromosomes 1-like 2 ...
GOLGA6D               0.005   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.005   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
PIK3C2A               0.005   phosphoinositide-3-kinase, class 2 alpha polypeptid...
KIF9                  0.005   kinesin family member 9 isoform 2 
KIF9                  0.005   kinesin family member 9 isoform 2 
KIF9                  0.005   kinesin family member 9 isoform 1 
CNTROB                0.005   centrobin, centrosomal BRCA2 interacting protein is...
CNTROB                0.005   centrobin, centrosomal BRCA2 interacting protein iso...
CCDC18                0.005   sarcoma antigen NY-SAR-41 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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