Search of human proteins with 71043642

Search of human proteins with 71043642

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|71043642 hypothetical protein LOC388799 [Homo sapiens]
         (171 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|71043642 hypothetical protein LOC388799 [Homo sapiens]             356   5e-99
gi|71043622 hypothetical protein LOC200232 [Homo sapiens]             310   5e-85
gi|31543980 zinc finger protein 263 [Homo sapiens]                     30   1.0  
gi|28274686 zinc finger protein 82 homolog [Homo sapiens]              30   1.3  
gi|148747437 Mob4B protein [Homo sapiens]                              30   1.3  
gi|32401441 GLI-Kruppel family member HKR1 [Homo sapiens]              29   2.3  
gi|122937201 similar to zinc finger protein 709 [Homo sapiens]         29   2.3  
gi|172072608 zinc finger protein 624 [Homo sapiens]                    28   3.0  
gi|85060499 zinc finger protein 718 [Homo sapiens]                     28   3.0  
gi|149363642 coiled-coil domain containing 144A [Homo sapiens]         28   3.0  
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo...    28   3.9  
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo...    28   3.9  
gi|7662408 zinc finger protein 30 homolog [Homo sapiens]               28   3.9  
gi|113205081 zinc finger protein 557 isoform a [Homo sapiens]          28   3.9  
gi|113205079 zinc finger protein 557 isoform a [Homo sapiens]          28   3.9  
gi|113205083 zinc finger protein 557 isoform b [Homo sapiens]          28   3.9  
gi|27735029 MOB1, Mps One Binder kinase activator-like 1A [Homo ...    28   3.9  
gi|37622343 zinc finger protein 266 [Homo sapiens]                     28   3.9  
gi|37622349 zinc finger protein 266 [Homo sapiens]                     28   3.9  
gi|23308733 zinc finger protein 337 [Homo sapiens]                     28   3.9  
gi|113680890 zinc finger protein 90 [Homo sapiens]                     28   5.0  
gi|15082252 zinc finger protein 670 [Homo sapiens]                     27   6.6  
gi|21389599 zinc finger protein 570 [Homo sapiens]                     27   6.6  
gi|115511042 zinc finger protein 493 isoform 1 [Homo sapiens]          27   8.6  
gi|115511044 zinc finger protein 493 isoform 3 [Homo sapiens]          27   8.6  
gi|5032009 muscle glycogen phosphorylase [Homo sapiens]                27   8.6  
gi|117956407 zinc finger protein 568 [Homo sapiens]                    27   8.6  
gi|28195384 neuronal pentraxin II [Homo sapiens]                       27   8.6  
gi|22749241 zinc finger protein 540 [Homo sapiens]                     27   8.6  
gi|217035158 zinc finger protein 780A isoform b [Homo sapiens]         27   8.6  

>gi|71043642 hypothetical protein LOC388799 [Homo sapiens]
          Length = 171

 Score =  356 bits (914), Expect = 5e-99
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MWTLKSSLVLLLCLTCSYAFMFSSLRQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGSKW 60
           MWTLKSSLVLLLCLTCSYAFMFSSLRQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGSKW
Sbjct: 1   MWTLKSSLVLLLCLTCSYAFMFSSLRQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGSKW 60

Query: 61  LWLLFAVVPFVILQCQRDSEKNKEQSPPGLRGFPFRTPLKKNQNASLYKDCVFNTLNELE 120
           LWLLFAVVPFVILQCQRDSEKNKEQSPPGLRGFPFRTPLKKNQNASLYKDCVFNTLNELE
Sbjct: 61  LWLLFAVVPFVILQCQRDSEKNKEQSPPGLRGFPFRTPLKKNQNASLYKDCVFNTLNELE 120

Query: 121 VELLKFVSEVQNLKGAMATGSGSNLKLRRSEMPADPYHVTICKIWGEESSS 171
           VELLKFVSEVQNLKGAMATGSGSNLKLRRSEMPADPYHVTICKIWGEESSS
Sbjct: 121 VELLKFVSEVQNLKGAMATGSGSNLKLRRSEMPADPYHVTICKIWGEESSS 171


>gi|71043622 hypothetical protein LOC200232 [Homo sapiens]
          Length = 171

 Score =  310 bits (793), Expect = 5e-85
 Identities = 150/171 (87%), Positives = 158/171 (92%)

Query: 1   MWTLKSSLVLLLCLTCSYAFMFSSLRQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGSKW 60
           MWTLKSSLVLLLCLTCSYAFMFSSLRQKTSEPQGKV  GEHFRIRQNLPEHTQGWLGSKW
Sbjct: 1   MWTLKSSLVLLLCLTCSYAFMFSSLRQKTSEPQGKVQYGEHFRIRQNLPEHTQGWLGSKW 60

Query: 61  LWLLFAVVPFVILQCQRDSEKNKEQSPPGLRGFPFRTPLKKNQNASLYKDCVFNTLNELE 120
           LWLLF VVPFVILQCQRDSEKNKEQSPPGLRG    +PLKK +NAS  KDC FNTL ELE
Sbjct: 61  LWLLFVVVPFVILQCQRDSEKNKEQSPPGLRGGQLHSPLKKKRNASPNKDCAFNTLMELE 120

Query: 121 VELLKFVSEVQNLKGAMATGSGSNLKLRRSEMPADPYHVTICKIWGEESSS 171
           VEL+KFVS+V+NLK AMATGSGSNL+LR+SEMPADPYHVTIC+IWGEESSS
Sbjct: 121 VELMKFVSKVRNLKRAMATGSGSNLRLRKSEMPADPYHVTICEIWGEESSS 171


>gi|31543980 zinc finger protein 263 [Homo sapiens]
          Length = 683

 Score = 30.0 bits (66), Expect = 1.0
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 5   KSSLVLLLCLTCSYAF---MFSSLRQKT---SEPQGKVPCGEHFRIRQNLPEHTQGWLGS 58
           K+   L  CLTC  +F   M  +  Q+T    +P     CGE+F  R NL  H +   G 
Sbjct: 569 KAEKKLFECLTCGKSFRQGMHLTRHQRTHTGEKPYKCTLCGENFSHRSNLIRHQRIHTGE 628

Query: 59  K 59
           K
Sbjct: 629 K 629


>gi|28274686 zinc finger protein 82 homolog [Homo sapiens]
          Length = 532

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 15/71 (21%)

Query: 13  CLTCSYAF-MFSSLRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSKWLWLLFA 66
           C  C  AF + S L Q  S   G+ P     CG+ FR+RQ L  H     G K       
Sbjct: 424 CKECGKAFRLLSQLTQHQSIHIGEKPYKCKECGKAFRLRQKLTLHQSIHTGEK------- 476

Query: 67  VVPFVILQCQR 77
             PF   +C++
Sbjct: 477 --PFECKECRK 485



 Score = 28.1 bits (61), Expect = 3.9
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 6/62 (9%)

Query: 4   LKSSLVLLLCLTCSYAFMFSS-LRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLG 57
           L S+  L  C  C  AF+  S LR       G+ P     CG+ FR+RQ L  H +   G
Sbjct: 303 LNSADRLYECKECGKAFLCGSGLRVHHKLHTGEKPYECKECGKAFRVRQQLTLHQRIHTG 362

Query: 58  SK 59
            K
Sbjct: 363 EK 364


>gi|148747437 Mob4B protein [Homo sapiens]
          Length = 216

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 19 AFMFSSLRQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGS 58
          +F+FSS   KT +P+  +P G H   +  L +H +  LGS
Sbjct: 2  SFLFSSRSSKTFKPKKNIPEGSH---QYELLKHAEATLGS 38


>gi|32401441 GLI-Kruppel family member HKR1 [Homo sapiens]
          Length = 659

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 15/72 (20%)

Query: 12  LCLTCSYAFMFSS---LRQKTS---EPQGKVPCGEHFRIRQNLPEHTQGWLGSKWLWLLF 65
           +C  C   F + S     Q+T    +P   + CG+ F ++ NL +H +   G K      
Sbjct: 442 VCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQRSHTGEK------ 495

Query: 66  AVVPFVILQCQR 77
              PFV  +C R
Sbjct: 496 ---PFVCTECGR 504


>gi|122937201 similar to zinc finger protein 709 [Homo sapiens]
          Length = 578

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 13  CLTCSYAFMFSSLRQKT------SEPQGKVPCGEHFRIRQNLPEHTQGWLGSK 59
           C  C  AF  +S+ QK        +P G   CG+ FR+   L  H +   G K
Sbjct: 444 CKQCGKAFRSASVLQKHIRTHTGEKPYGCKQCGKVFRVASQLKMHERTHTGEK 496


>gi|172072608 zinc finger protein 624 [Homo sapiens]
          Length = 865

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 15/71 (21%)

Query: 13  CLTCSYAFMFSSL-----RQKTSE-PQGKVPCGEHFRIRQNLPEHTQGWLGSKWLWLLFA 66
           C  C  AFM SS      R  T E P     CGE FRI+ +L  H +   G K       
Sbjct: 558 CTECGKAFMRSSSLIIHQRIHTEEKPYLCNECGESFRIKSHLTVHQRIHTGEK------- 610

Query: 67  VVPFVILQCQR 77
             P+    C+R
Sbjct: 611 --PYKCTDCER 619


>gi|85060499 zinc finger protein 718 [Homo sapiens]
          Length = 478

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%)

Query: 12  LCLTCSYAFMFSSLRQK------TSEPQGKVPCGEHFRIRQNLPEHTQGWLGSKW 60
           +C  C  AF  SS   K        +P     CG+ F+   NLP+H +   G K+
Sbjct: 424 ICKQCGKAFKQSSHLNKHKKIHTVDKPYKCKECGKAFKQYSNLPQHKRTHTGGKF 478


>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
          Length = 1427

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 74  QCQRDSEKNKEQSPPGLRGFPFRTPLKKNQNASLYKDC 111
           + ++DSE   E+    L+G   + P K +Q   + KDC
Sbjct: 221 EAEQDSELTSEEEQERLKGCENKQPQKTSQEPEMAKDC 258


>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 13  CLTCSYAFMFSSLRQK------TSEPQGKVPCGEHFRIRQNLPEHTQGWLGSK 59
           C  C+  F  SS   +       + PQ    CG+ FR R NL EH +  LG +
Sbjct: 906 CGVCAKRFAQSSSLAEHRRLHAVARPQRCSACGKTFRYRSNLLEHQRLHLGER 958


>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 13  CLTCSYAFMFSSLRQK------TSEPQGKVPCGEHFRIRQNLPEHTQGWLGSK 59
           C  C+  F  SS   +       + PQ    CG+ FR R NL EH +  LG +
Sbjct: 906 CGVCAKRFAQSSSLAEHRRLHAVARPQRCSACGKTFRYRSNLLEHQRLHLGER 958


>gi|7662408 zinc finger protein 30 homolog [Homo sapiens]
          Length = 519

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)

Query: 13  CLTCSYAFMFSS-LRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSK 59
           C  C  AF+ S+ LR       G+ P     CG+ FR+RQ L  H +   G K
Sbjct: 300 CKECGQAFLCSTGLRLHHKLHTGEKPYECKECGKAFRVRQQLTLHQRIHTGEK 352


>gi|113205081 zinc finger protein 557 isoform a [Homo sapiens]
          Length = 430

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 12  LCLTCSYAF-MFSSLRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSK 59
           +C  C  AF   SSL    S   G+ P     CG  FR R NL +H +   G K
Sbjct: 293 VCNQCGKAFGTRSSLSSHYSIHTGEYPYECHDCGRTFRRRSNLTQHIRTHTGEK 346


>gi|113205079 zinc finger protein 557 isoform a [Homo sapiens]
          Length = 430

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 12  LCLTCSYAF-MFSSLRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSK 59
           +C  C  AF   SSL    S   G+ P     CG  FR R NL +H +   G K
Sbjct: 293 VCNQCGKAFGTRSSLSSHYSIHTGEYPYECHDCGRTFRRRSNLTQHIRTHTGEK 346


>gi|113205083 zinc finger protein 557 isoform b [Homo sapiens]
          Length = 423

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 12  LCLTCSYAF-MFSSLRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSK 59
           +C  C  AF   SSL    S   G+ P     CG  FR R NL +H +   G K
Sbjct: 286 VCNQCGKAFGTRSSLSSHYSIHTGEYPYECHDCGRTFRRRSNLTQHIRTHTGEK 339


>gi|27735029 MOB1, Mps One Binder kinase activator-like 1A [Homo
          sapiens]
          Length = 216

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 19 AFMFSSLRQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGS 58
          +F+F S   KT +P+  +P G H   +  L +H +  LGS
Sbjct: 2  SFLFGSRSSKTFKPKKNIPEGSH---QYELLKHAEATLGS 38


>gi|37622343 zinc finger protein 266 [Homo sapiens]
          Length = 549

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 15/69 (21%)

Query: 13  CLTCSYAFMFSS-LRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSKWLWLLFA 66
           C  C  AF  SS L + T    G+ P     CG+ F I  NL  H +   G K       
Sbjct: 382 CKECGKAFARSSRLSEHTRTHTGEKPFECVKCGKAFAISSNLSGHLRIHTGEK------- 434

Query: 67  VVPFVILQC 75
             PF  L+C
Sbjct: 435 --PFECLEC 441


>gi|37622349 zinc finger protein 266 [Homo sapiens]
          Length = 549

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 15/69 (21%)

Query: 13  CLTCSYAFMFSS-LRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSKWLWLLFA 66
           C  C  AF  SS L + T    G+ P     CG+ F I  NL  H +   G K       
Sbjct: 382 CKECGKAFARSSRLSEHTRTHTGEKPFECVKCGKAFAISSNLSGHLRIHTGEK------- 434

Query: 67  VVPFVILQC 75
             PF  L+C
Sbjct: 435 --PFECLEC 441


>gi|23308733 zinc finger protein 337 [Homo sapiens]
          Length = 751

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 12  LCLTCSYAFMFSS---LRQKT---SEPQGKVPCGEHFRIRQNLPEHTQGWLGSK 59
           +C  C   F+  S   L Q+T    +P G   CG  FR + +  +H +  LG K
Sbjct: 461 VCKDCGRGFIQKSTFTLHQRTHSEEKPYGCRECGRRFRDKSSYNKHLRAHLGEK 514


>gi|113680890 zinc finger protein 90 [Homo sapiens]
          Length = 636

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 13  CLTCSYAF-MFSSLRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSK 59
           C+ C  AF   SSL Q      G+ P     CG  FR + NL +H +   G K
Sbjct: 555 CIDCGKAFSQSSSLIQHERTHTGEKPYECNECGRAFRKKTNLHDHQRIHTGEK 607


>gi|15082252 zinc finger protein 670 [Homo sapiens]
          Length = 389

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 13  CLTCSYAFMFSS-LRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSK 59
           C  C  AF +SS LR+      G+ P     CG+ F    +L +H +   G K
Sbjct: 199 CKHCDKAFNYSSYLREHERTHTGEKPYACKKCGKSFTFSSSLRQHERSHTGEK 251


>gi|21389599 zinc finger protein 570 [Homo sapiens]
          Length = 536

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 15/79 (18%)

Query: 10  LLLCLTCSYAFMFSS---LRQKT---SEPQGKVPCGEHFRIRQNLPEHTQGWLGSKWLWL 63
           LL C  C   F  SS   L Q+     +P   + CG+ F  R NL +H +   G K    
Sbjct: 217 LLKCNDCEKVFSQSSSLTLHQRIHTGEKPYKCIECGKAFSQRSNLVQHQRIHTGEK---- 272

Query: 64  LFAVVPFVILQCQRDSEKN 82
                P+   +C++   +N
Sbjct: 273 -----PYECKECRKAFSQN 286


>gi|115511042 zinc finger protein 493 isoform 1 [Homo sapiens]
          Length = 646

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 5/52 (9%)

Query: 13  CLTCSYAFM-FSSL----RQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGSK 59
           C  C  AF+ FS+L    R  T E   K  CG+ F    NL  H +   G K
Sbjct: 84  CEECGKAFIWFSTLTRHRRVHTGEKSYKYECGKSFNQDSNLTTHKRIHTGQK 135


>gi|115511044 zinc finger protein 493 isoform 3 [Homo sapiens]
          Length = 774

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 5/52 (9%)

Query: 13  CLTCSYAFM-FSSL----RQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGSK 59
           C  C  AF+ FS+L    R  T E   K  CG+ F    NL  H +   G K
Sbjct: 212 CEECGKAFIWFSTLTRHRRVHTGEKSYKYECGKSFNQDSNLTTHKRIHTGQK 263


>gi|5032009 muscle glycogen phosphorylase [Homo sapiens]
          Length = 842

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 78  DSEKNKEQSPPGLRGFPFRTPLKKNQNASLY 108
           D EK K+ S  GL G    T LKKN N  L+
Sbjct: 7   DQEKRKQISVRGLAGVENVTELKKNFNRHLH 37


>gi|117956407 zinc finger protein 568 [Homo sapiens]
          Length = 644

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 13  CLTCSYAF-MFSSLRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSK 59
           C  C  AF   S+L +      G+ P     CG+ F  RQNL EH +   G K
Sbjct: 504 CTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEK 556


>gi|28195384 neuronal pentraxin II [Homo sapiens]
          Length = 431

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 122 ELLKFVSEVQNLKGAMATGSGSNLKLRRSEMPADPYHV 159
           EL   ++  + L G  A G+G+  K    ++P DP HV
Sbjct: 86  ELTGKLARCEGLAGGKARGAGATGKDTMGDLPRDPGHV 123


>gi|22749241 zinc finger protein 540 [Homo sapiens]
          Length = 660

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 3   TLKSSLVLLLCLTCSYAFMFSS-LRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWL 56
           T+ + +    C  C  AF +S  LR  +    G+ P     CG+ F +R  L EH +   
Sbjct: 403 TIHTGIKPFACKVCEKAFSYSGDLRVHSRIHTGEKPYECKECGKAFMLRSVLTEHQRLHT 462

Query: 57  GSK 59
           G K
Sbjct: 463 GVK 465


>gi|217035158 zinc finger protein 780A isoform b [Homo sapiens]
          Length = 641

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 19/84 (22%)

Query: 13  CLTCSYAF-MFSSLRQKTSEPQGKVP-----CGEHFRIRQNLPEHTQGWLGSKWLWLLFA 66
           C  C  AF   SSL Q  S   G+ P     CG+ FR+   L +H +   G K       
Sbjct: 475 CQDCGKAFNRGSSLVQHQSIHTGEKPYECKECGKAFRLYLQLSQHQKTHTGEK------- 527

Query: 67  VVPFVILQC----QRDSEKNKEQS 86
             PF   +C    +R S  N+ +S
Sbjct: 528 --PFECKECGKFFRRGSNLNQHRS 549


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,237,755
Number of Sequences: 37866
Number of extensions: 313768
Number of successful extensions: 1259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1224
Number of HSP's gapped (non-prelim): 72
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.