Guide to the Human Genome
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Name: PYGM Sequence: fasta or formatted (842aa) NCBI GI: 5032009
Description:

muscle glycogen phosphorylase

Referenced in:

Glycogen

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         65           3
 C cysteine            1.0          8           1
 D aspartate           6.2         52           2
 E glutamate           7.4         62           2
 F phenylalanine       4.9         41           2
 G glycine             5.7         48           2
 H histidine           2.7         23           2
 I isoleucine          5.9         50           2
 K lysine              5.5         46           2
 L leucine             9.3         78           2
 M methionine          2.7         23           1
 N asparagine          5.5         46           2
 P proline             4.2         35           1
 Q glutamine           3.6         30           2
 R arginine            7.5         63           2
 S serine              3.6         30           2
 T threonine           4.3         36           1
 V valine              7.1         60           2
 W tryptophan          1.4         12           1
 Y tyrosine            4.0         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   muscle glycogen phosphorylase 
PYGB                  0.867   brain glycogen phosphorylase 
PYGL                  0.827   liver glycogen phosphorylase 
ZNF675                0.007   zinc finger protein 675 
IQGAP2                0.005   IQ motif containing GTPase activating protein 2 [Ho...
EXPH5                 0.005   exophilin 5 isoform c 
EXPH5                 0.005   exophilin 5 isoform b 
EXPH5                 0.005   exophilin 5 isoform a 
RICTOR                0.003   rapamycin-insensitive companion of mTOR 
PDE4DIP               0.003   phosphodiesterase 4D interacting protein isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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