PROM1 15042

Name: PROM1	Sequence: fasta or formatted (856aa)		NCBI GI: 224994191
Description: prominin 1 isoform 2		Referenced in: Hematopoiesis and Erythrocytes
Other entries for this name: alt mRNA [856aa] prominin 1 isoform 2 alt prot [842aa] prominin 1 isoform 7 alt prot [834aa] prominin 1 isoform 6 alt prot [833aa] prominin 1 isoform 5 alt prot [825aa] prominin 1 isoform 4 alt prot [865aa] prominin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 40 2 C cysteine 2.6 22 2 D aspartate 4.8 41 2 E glutamate 4.8 41 2 F phenylalanine 4.3 37 2 G glycine 6.1 52 3 H histidine 2.0 17 1 I isoleucine 7.4 63 3 K lysine 5.3 45 2 L leucine 12.9 110 4 M methionine 1.6 14 1 N asparagine 6.3 54 2 P proline 3.7 32 2 Q glutamine 4.0 34 2 R arginine 4.2 36 2 S serine 7.9 68 3 T threonine 6.0 51 3 V valine 6.3 54 2 W tryptophan 0.8 7 2 Y tyrosine 4.4 38 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 prominin 1 isoform 2 PROM1 1.000 prominin 1 isoform 2 PROM1 0.996 prominin 1 isoform 1 PROM1 0.964 prominin 1 isoform 5 PROM1 0.960 prominin 1 isoform 7 PROM1 0.955 prominin 1 isoform 4 PROM1 0.950 prominin 1 isoform 6 PROM2 0.196 prominin 2 SYCP1 0.012 synaptonemal complex protein 1 MMRN1 0.010 multimerin 1 KIF15 0.008 kinesin family member 15 KIAA0494 0.008 hypothetical protein LOC9813 OLFM1 0.008 olfactomedin related ER localized protein isoform 1 ... CCPG1 0.007 cell cycle progression 1 isoform 2 CCPG1 0.007 cell cycle progression 1 isoform 1 GJB4 0.006 gap junction protein, beta 4 FAM13B 0.006 hypothetical protein LOC51306 isoform 1 CENPF 0.006 centromere protein F RAD50 0.006 RAD50 homolog isoform 2 RAD50 0.006 RAD50 homolog isoform 1 KRT35 0.006 keratin 35 FAM13B 0.005 hypothetical protein LOC51306 isoform 3 FAM13B 0.005 hypothetical protein LOC51306 isoform 2 TTYH2 0.005 tweety 2 isoform 1 GOLGB1 0.005 golgi autoantigen, golgin subfamily b, macrogolgin ... GCC2 0.004 GRIP and coiled-coil domain-containing 2 LOC650621 0.004 PREDICTED: similar to anaphase-promoting complex su... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.