Guide to the Human Genome
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Name: GNA15 Sequence: fasta or formatted (374aa) NCBI GI: 156104883
Description:

guanine nucleotide binding protein (G protein), alpha 15 (Gq class)

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         25           3
 C cysteine            2.1          8           2
 D aspartate           4.5         17           1
 E glutamate           8.6         32           3
 F phenylalanine       4.3         16           1
 G glycine             4.8         18           2
 H histidine           2.1          8           2
 I isoleucine          5.9         22           2
 K lysine              6.4         24           2
 L leucine             9.9         37           4
 M methionine          2.9         11           1
 N asparagine          2.9         11           2
 P proline             3.5         13           1
 Q glutamine           4.3         16           1
 R arginine            8.3         31           3
 S serine              6.7         25           1
 T threonine           5.3         20           2
 V valine              4.5         17           1
 W tryptophan          1.6          6           1
 Y tyrosine            4.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein (G protein), alp... 
GNAQ                  0.512   guanine nucleotide binding protein (G protein), q po...
GNA11                 0.508   guanine nucleotide binding protein (G protein), alp...
GNA14                 0.490   G alpha 14 
GNA13                 0.356   guanine nucleotide binding protein (G protein), alph...
GNAI1                 0.351   guanine nucleotide binding protein (G protein), alph...
GNAT3                 0.349   guanine nucleotide binding protein, alpha transduci...
GNAI2                 0.348   guanine nucleotide binding protein (G protein), alpha...
GNAO1                 0.348   guanine nucleotide binding protein, alpha activatin...
GNAI3                 0.348   guanine nucleotide binding protein (G protein), alpha...
GNAT1                 0.344   rod-type transducin alpha subunit 
GNAT1                 0.344   rod-type transducin alpha subunit 
GNAT2                 0.342   guanine nucleotide binding protein, alpha transducin...
GNA12                 0.334   guanine nucleotide binding protein (G protein) alpha...
GNAO1                 0.334   guanine nucleotide binding protein, alpha activating...
GNAZ                  0.332   guanine nucleotide binding protein, alpha z polypepti...
GNAL                  0.310   guanine nucleotide binding protein (G protein), alph...
GNAL                  0.303   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.303   guanine nucleotide binding protein (G protein), alp...
GNAS                  0.297   GNAS complex locus isoform g 
GNAS                  0.296   GNAS complex locus GNASS 
GNAS                  0.288   GNAS complex locus GNASL 
GNAS                  0.286   GNAS complex locus isoform f 
GNAS                  0.277   GNAS complex locus XLas 
ARL3                  0.027   ADP-ribosylation factor-like 3 
ARL14                 0.025   ADP-ribosylation factor-like 14 
ARF5                  0.025   ADP-ribosylation factor 5 
TRIM23                0.022   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.020   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.020   ADP-ribosylation factor domain protein 1 isoform alph...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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