Guide to the Human Genome
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Name: CRISPLD1 Sequence: fasta or formatted (500aa) NCBI GI: 13899303
Description:

cysteine-rich secretory protein LCCL domain containing 1

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         33           2
 C cysteine            5.0         25           1
 D aspartate           4.0         20           2
 E glutamate           5.6         28           3
 F phenylalanine       2.4         12           1
 G glycine             6.4         32           3
 H histidine           3.8         19           1
 I isoleucine          5.0         25           2
 K lysine              4.4         22           1
 L leucine             4.4         22           2
 M methionine          2.4         12           1
 N asparagine          5.0         25           1
 P proline             5.6         28           2
 Q glutamine           4.6         23           2
 R arginine            6.8         34           1
 S serine              7.6         38           2
 T threonine           5.0         25           2
 V valine              7.6         38           2
 W tryptophan          2.8         14           2
 Y tyrosine            5.0         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine-rich secretory protein LCCL domain containi... 
CRISPLD2              0.576   cysteine-rich secretory protein LCCL domain containi...
PI15                  0.257   protease inhibitor 15 preproprotein 
R3HDML                0.225   R3H domain containing-like 
GLIPR1                0.098   GLI pathogenesis-related 1 precursor 
PI16                  0.094   protease inhibitor 16 precursor 
GLIPR1L1              0.078   GLI pathogenesis-related 1 like 1 
CRISP3                0.076   cysteine-rich secretory protein 3 
CRISP2                0.071   cysteine-rich secretory protein 2 
CRISP2                0.071   cysteine-rich secretory protein 2 
CRISP2                0.071   cysteine-rich secretory protein 2 
CRISP2                0.071   cysteine-rich secretory protein 2 
CRISP2                0.071   cysteine-rich secretory protein 2 
GLIPR1L2              0.064   GLI pathogenesis-related 1 like 2 
CLEC18A               0.059   secretory protein LOC348174 
CLEC18A               0.059   secretory protein LOC348174 
CLEC18C               0.058   mannose receptor-like 
CRISP1                0.058   acidic epididymal glycoprotein-like 1 isoform 1 prec...
CLEC18B               0.057   C-type lectin domain family 18, member B 
CRISP1                0.038   acidic epididymal glycoprotein-like 1 isoform 2 prec...
VIT                   0.031   vitrin 
COCH                  0.030   cochlin precursor 
COCH                  0.030   cochlin precursor 
DCBLD2                0.017   discoidin, CUB and LCCL domain containing 2 
ATRNL1                0.014   attractin-like 1 
DCBLD1                0.013   discoidin, CUB and LCCL domain containing 1 
GLIPR2                0.010   GLI pathogenesis-related 2 
IPPK                  0.007   inositol 1,3,4,5,6-pentakisphosphate 2-kinase 
SAMD9L                0.005   sterile alpha motif domain containing 9-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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