Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CRISP1 Sequence: fasta or formatted (249aa) NCBI GI: 25121982
Description:

acidic epididymal glycoprotein-like 1 isoform 1 precursor

Referenced in:

Protease Inhibitors
Testes and Sperm

Other entries for this name:
alt prot [178aa] acidic epididymal glycoprotein-like 1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         14           3
 C cysteine            6.8         17           1
 D aspartate           5.2         13           3
 E glutamate           6.8         17           2
 F phenylalanine       2.8          7           1
 G glycine             3.2          8           1
 H histidine           3.6          9           1
 I isoleucine          5.2         13           1
 K lysine              5.2         13           3
 L leucine             7.2         18           2
 M methionine          3.2          8           1
 N asparagine          5.6         14           1
 P proline             5.2         13           2
 Q glutamine           2.8          7           2
 R arginine            3.6          9           3
 S serine              7.6         19           2
 T threonine           7.6         19           3
 V valine              5.2         13           2
 W tryptophan          2.0          5           1
 Y tyrosine            5.2         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acidic epididymal glycoprotein-like 1 isoform 1 prec... 
CRISP1                0.680   acidic epididymal glycoprotein-like 1 isoform 2 prec...
CRISP2                0.376   cysteine-rich secretory protein 2 
CRISP2                0.376   cysteine-rich secretory protein 2 
CRISP2                0.376   cysteine-rich secretory protein 2 
CRISP2                0.376   cysteine-rich secretory protein 2 
CRISP2                0.376   cysteine-rich secretory protein 2 
CRISP3                0.345   cysteine-rich secretory protein 3 
GLIPR1                0.156   GLI pathogenesis-related 1 precursor 
CRISPLD1              0.119   cysteine-rich secretory protein LCCL domain containi...
PI15                  0.115   protease inhibitor 15 preproprotein 
CRISPLD2              0.115   cysteine-rich secretory protein LCCL domain containi...
GLIPR1L1              0.113   GLI pathogenesis-related 1 like 1 
PI16                  0.111   protease inhibitor 16 precursor 
CLEC18A               0.107   secretory protein LOC348174 
CLEC18A               0.107   secretory protein LOC348174 
CLEC18C               0.105   mannose receptor-like 
CLEC18B               0.103   C-type lectin domain family 18, member B 
GLIPR1L2              0.099   GLI pathogenesis-related 1 like 2 
R3HDML                0.097   R3H domain containing-like 
GLIPR2                0.035   GLI pathogenesis-related 2 
MUC5AC                0.016   mucin 5AC 
MUC5B                 0.016   mucin 5, subtype B, tracheobronchial 
FHL1                  0.014   four and a half LIM domains 1 isoform 3 
LRP2                  0.012   low density lipoprotein-related protein 2 
DLL4                  0.012   delta-like 4 protein precursor 
FHL1                  0.012   four and a half LIM domains 1 isoform 5 
FHL1                  0.010   four and a half LIM domains 1 isoform 4 
FHL1                  0.010   four and a half LIM domains 1 isoform 2 
FHL1                  0.010   four and a half LIM domains 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press