Guide to the Human Genome
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Name: GLIPR1 Sequence: fasta or formatted (266aa) NCBI GI: 110825980
Description:

GLI pathogenesis-related 1 precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         16           1
 C cysteine            4.1         11           1
 D aspartate           5.3         14           1
 E glutamate           1.9          5           1
 F phenylalanine       4.1         11           1
 G glycine             4.1         11           2
 H histidine           3.0          8           1
 I isoleucine          7.1         19           2
 K lysine              5.6         15           2
 L leucine             6.8         18           2
 M methionine          1.5          4           1
 N asparagine          7.1         19           2
 P proline             6.0         16           2
 Q glutamine           3.0          8           1
 R arginine            4.1         11           1
 S serine              7.5         20           2
 T threonine           5.6         15           1
 V valine              8.3         22           2
 W tryptophan          3.0          8           1
 Y tyrosine            5.6         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GLI pathogenesis-related 1 precursor 
GLIPR1L1              0.328   GLI pathogenesis-related 1 like 1 
GLIPR1L2              0.277   GLI pathogenesis-related 1 like 2 
CRISPLD2              0.196   cysteine-rich secretory protein LCCL domain containi...
CRISPLD1              0.189   cysteine-rich secretory protein LCCL domain containi...
PI16                  0.189   protease inhibitor 16 precursor 
CRISP3                0.171   cysteine-rich secretory protein 3 
PI15                  0.171   protease inhibitor 15 preproprotein 
CRISP2                0.165   cysteine-rich secretory protein 2 
CRISP2                0.165   cysteine-rich secretory protein 2 
CRISP2                0.165   cysteine-rich secretory protein 2 
CRISP2                0.165   cysteine-rich secretory protein 2 
CRISP2                0.165   cysteine-rich secretory protein 2 
CRISP1                0.147   acidic epididymal glycoprotein-like 1 isoform 1 prec...
R3HDML                0.143   R3H domain containing-like 
CLEC18B               0.112   C-type lectin domain family 18, member B 
CLEC18A               0.106   secretory protein LOC348174 
CLEC18A               0.106   secretory protein LOC348174 
CLEC18C               0.106   mannose receptor-like 
CRISP1                0.099   acidic epididymal glycoprotein-like 1 isoform 2 prec...
GLIPR2                0.026   GLI pathogenesis-related 2 
ITGB8                 0.009   integrin, beta 8 precursor 
EGF                   0.007   epidermal growth factor (beta-urogastrone) 
PNLIPRP2              0.007   pancreatic lipase-related protein 2 
C7orf31               0.007   hypothetical protein LOC136895 
ITGB1                 0.006   integrin beta 1 isoform 1C-1 precursor 
ITGB1                 0.006   integrin beta 1 isoform 1B precursor 
ITGB1                 0.006   integrin beta 1 isoform 1A precursor 
ITGB1                 0.006   integrin beta 1 isoform 1A precursor 
ITGB1                 0.006   integrin beta 1 isoform 1C-2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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