Guide to the Human Genome
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Name: GLIPR2 Sequence: fasta or formatted (154aa) NCBI GI: 11641247
Description:

GLI pathogenesis-related 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         13           1
 C cysteine            1.3          2           1
 D aspartate           1.9          3           1
 E glutamate           7.1         11           2
 F phenylalanine       5.2          8           2
 G glycine             8.4         13           1
 H histidine           3.2          5           1
 I isoleucine          1.3          2           1
 K lysine              9.7         15           2
 L leucine             5.2          8           1
 M methionine          1.9          3           1
 N asparagine          7.1         11           1
 P proline             4.5          7           2
 Q glutamine           5.2          8           2
 R arginine            3.9          6           1
 S serine              9.1         14           2
 T threonine           3.9          6           1
 V valine              6.5         10           2
 W tryptophan          1.9          3           1
 Y tyrosine            3.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GLI pathogenesis-related 2 
CRISP2                0.125   cysteine-rich secretory protein 2 
CRISP2                0.125   cysteine-rich secretory protein 2 
CRISP2                0.125   cysteine-rich secretory protein 2 
CRISP2                0.125   cysteine-rich secretory protein 2 
CRISP2                0.125   cysteine-rich secretory protein 2 
CRISP3                0.114   cysteine-rich secretory protein 3 
CRISPLD2              0.081   cysteine-rich secretory protein LCCL domain containi...
PI16                  0.071   protease inhibitor 16 precursor 
GLIPR1L1              0.067   GLI pathogenesis-related 1 like 1 
PI15                  0.064   protease inhibitor 15 preproprotein 
CRISP1                0.061   acidic epididymal glycoprotein-like 1 isoform 1 prec...
CRISP1                0.057   acidic epididymal glycoprotein-like 1 isoform 2 prec...
GLIPR1                0.047   GLI pathogenesis-related 1 precursor 
CLEC18B               0.034   C-type lectin domain family 18, member B 
CRISPLD1              0.034   cysteine-rich secretory protein LCCL domain containi...
CLEC18A               0.034   secretory protein LOC348174 
CLEC18A               0.034   secretory protein LOC348174 
CLEC18C               0.034   mannose receptor-like 
GLIPR1L2              0.027   GLI pathogenesis-related 1 like 2 
R3HDML                0.020   R3H domain containing-like 
LOC647678             0.010   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.010   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.010   PREDICTED: hypothetical protein XP_002343697 
ABL2                  0.007   arg tyrosine kinase isoform c 
ABL2                  0.007   arg tyrosine kinase isoform b 
ABL2                  0.007   arg tyrosine kinase isoform a 
ZNF397                0.007   zinc finger protein 397 isoform 1 
ONECUT2               0.007   one cut domain, family member 2 
ONECUT1               0.007   one cut homeobox 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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