Search of human proteins with 6912502

Search of human proteins with 6912502

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912502 alpha-1,3-mannosyl-glycoprotein
4-beta-N-acetylglucosaminyltransferase A isoform 1 [Homo sapiens]
         (535 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912502 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...  1074   0.0  
gi|237512959 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   797   0.0  
gi|7710152 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...   648   0.0  
gi|16915936 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco...   623   e-178
gi|166197698 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   229   6e-60
gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]           64   3e-10
gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]           64   3e-10
gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]           64   3e-10
gi|100814339 coiled-coil domain containing 146 [Homo sapiens]          37   0.059
gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo s...    32   1.5  
gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens]     32   1.9  
gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens]     32   1.9  
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    31   2.5  
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    31   2.5  
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho...    31   2.5  
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho...    31   2.5  
gi|148612801 KIAA1009 protein [Homo sapiens]                           31   2.5  
gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]              31   3.2  
gi|224922812 tropomyosin 2 (beta) isoform 3 [Homo sapiens]             31   3.2  
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]         31   3.2  
gi|94721321 coiled-coil domain containing 11 [Homo sapiens]            30   4.2  
gi|22748701 zinc finger protein 641 [Homo sapiens]                     30   7.2  
gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens]     29   9.4  
gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens]       29   9.4  
gi|154090997 coiled-coil domain containing 13 [Homo sapiens]           29   9.4  

>gi|6912502 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 1 [Homo
           sapiens]
          Length = 535

 Score = 1074 bits (2777), Expect = 0.0
 Identities = 535/535 (100%), Positives = 535/535 (100%)

Query: 1   MRLRNGTVATALAFITSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRIAEHRISQRSS 60
           MRLRNGTVATALAFITSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRIAEHRISQRSS
Sbjct: 1   MRLRNGTVATALAFITSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRIAEHRISQRSS 60

Query: 61  ELNTIVQQFKRVGAETNGSKDALNKFSDNTLKLLKELTSKKSLQVPSIYYHLPHLLKNEG 120
           ELNTIVQQFKRVGAETNGSKDALNKFSDNTLKLLKELTSKKSLQVPSIYYHLPHLLKNEG
Sbjct: 61  ELNTIVQQFKRVGAETNGSKDALNKFSDNTLKLLKELTSKKSLQVPSIYYHLPHLLKNEG 120

Query: 121 SLQPAVQIGNGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGET 180
           SLQPAVQIGNGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGET
Sbjct: 121 SLQPAVQIGNGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGET 180

Query: 181 DIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNL 240
           DIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNL
Sbjct: 181 DIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNL 240

Query: 241 DYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMF 300
           DYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMF
Sbjct: 241 DYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMF 300

Query: 301 QAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQ 360
           QAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQ
Sbjct: 301 QAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQ 360

Query: 361 HVGLHSSLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWA 420
           HVGLHSSLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWA
Sbjct: 361 HVGLHSSLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWA 420

Query: 421 ITPIAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDK 480
           ITPIAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDK
Sbjct: 421 ITPIAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDK 480

Query: 481 RLEDGYFRIGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNEIHIKKATN 535
           RLEDGYFRIGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNEIHIKKATN
Sbjct: 481 RLEDGYFRIGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNEIHIKKATN 535


>gi|237512959 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 2 [Homo
           sapiens]
          Length = 423

 Score =  797 bits (2059), Expect = 0.0
 Identities = 393/393 (100%), Positives = 393/393 (100%)

Query: 135 VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK 194
           VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK
Sbjct: 7   VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK 66

Query: 195 EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI 254
           EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI
Sbjct: 67  EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI 126

Query: 255 YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM 314
           YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM
Sbjct: 127 YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM 186

Query: 315 FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK 374
           FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK
Sbjct: 187 FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK 246

Query: 375 LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD 434
           LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD
Sbjct: 247 LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD 306

Query: 435 KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFEN 494
           KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFEN
Sbjct: 307 KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFEN 366

Query: 495 GVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE 527
           GVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE
Sbjct: 367 GVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE 399


>gi|7710152 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 1 [Homo
           sapiens]
          Length = 548

 Score =  648 bits (1671), Expect = 0.0
 Identities = 332/547 (60%), Positives = 399/547 (72%), Gaps = 14/547 (2%)

Query: 1   MRLRNGTVATALAF-ITSFLTLSWYTTWQNGKEKLI-AYQREFLALKERLRIAEHRISQR 58
           MRLRNGT  T L F + +FL+LSWY      K  ++  YQREFLAL++RL  AE    +R
Sbjct: 1   MRLRNGTFLTLLLFCLCAFLSLSWYAALSGQKGDVVDVYQREFLALRDRLHAAEQESLKR 60

Query: 59  SSELNTIVQQFKRVGAETNGSKDALNKFSDNTLKLLKEL-----TSKKSLQVPSIYYHLP 113
           S ELN ++ + KR  +E    +D     +   L     L     + +  L +P++++HLP
Sbjct: 61  SKELNLVLDEIKRAVSERQALRDGDGNRTWGRLTEDPRLKPWNGSHRHVLHLPTVFHHLP 120

Query: 114 HLLKNEGSLQPAVQIGNGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVI 173
           HLL  E SLQPAV++G GRTGVS+VMGIP+V+REV SYL +TLHSLI  L P+EK D VI
Sbjct: 121 HLLAKESSLQPAVRVGQGRTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVI 180

Query: 174 VVFIGETDIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVR 233
           VV I ETD  Y   V  N++  F  EI SGL+EVISP   +YPD + L+E+FGD KERVR
Sbjct: 181 VVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVR 240

Query: 234 WRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQL 293
           WRTKQNLDYCFLMMYAQ KGIYY+QLEDDI+ K NY +T+KNFALQ  SE+WMILEFSQL
Sbjct: 241 WRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQL 300

Query: 294 GFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR 353
           GFIGKMF++ DL+LIVEFI MFY++KPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR
Sbjct: 301 GFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR 360

Query: 354 FRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYM 413
           F+PSLFQHVG HSSL+GKIQKL DKD+ K  L K HVNPPAEVSTSLK YQ  TLEK Y+
Sbjct: 361 FKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYL 420

Query: 414 GEDFFWAITPIAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKS----- 468
            EDFFWA TP AGD+I F+F +P+ +E + F SGN EHP D L NT+VEVLPF +     
Sbjct: 421 REDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDK 480

Query: 469 EGLEISKET--KDKRLEDGYFRIGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILN 526
           E L+  +    +  R  DGY +IG F  GVAEG VDP+  P+ A RLS+  +S VW IL+
Sbjct: 481 EALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILS 540

Query: 527 EIHIKKA 533
           EI +KKA
Sbjct: 541 EIFLKKA 547


>gi|16915936 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 2 [Homo
           sapiens]
          Length = 563

 Score =  623 bits (1607), Expect = e-178
 Identities = 315/509 (61%), Positives = 377/509 (74%), Gaps = 12/509 (2%)

Query: 37  YQREFLALKERLRIAEHRISQRSSELNTIVQQFKRVGAETNGSKDALNKFSDNTLKLLKE 96
           YQREFLAL++RL  AE    +RS ELN ++ + KR  +E    +D     +   L     
Sbjct: 54  YQREFLALRDRLHAAEQESLKRSKELNLVLDEIKRAVSERQALRDGDGNRTWGRLTEDPR 113

Query: 97  L-----TSKKSLQVPSIYYHLPHLLKNEGSLQPAVQIGNGRTGVSIVMGIPTVKREVKSY 151
           L     + +  L +P++++HLPHLL  E SLQPAV++G GRTGVS+VMGIP+V+REV SY
Sbjct: 114 LKPWNGSHRHVLHLPTVFHHLPHLLAKESSLQPAVRVGQGRTGVSVVMGIPSVRREVHSY 173

Query: 152 LIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEFSKEISSGLVEVISPP 211
           L +TLHSLI  L P+EK D VIVV I ETD  Y   V  N++  F  EI SGL+EVISP 
Sbjct: 174 LTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPS 233

Query: 212 ESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFN 271
             +YPD + L+E+FGD KERVRWRTKQNLDYCFLMMYAQ KGIYY+QLEDDI+ K NY +
Sbjct: 234 PHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLS 293

Query: 272 TIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWV 331
           T+KNFALQ  SE+WMILEFSQLGFIGKMF++ DL+LIVEFI MFY++KPIDWLLDHILWV
Sbjct: 294 TMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWV 353

Query: 332 KVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKIHVN 391
           KVCNPEKDAKHCDRQKANLRIRF+PSLFQHVG HSSL+GKIQKL DKD+ K  L K HVN
Sbjct: 354 KVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVN 413

Query: 392 PPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFDKPVNVESYLFHSGNQEH 451
           PPAEVSTSLK YQ  TLEK Y+ EDFFWA TP AGD+I F+F +P+ +E + F SGN EH
Sbjct: 414 PPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEH 473

Query: 452 PGDILLNTTVEVLPFKS-----EGLEISKET--KDKRLEDGYFRIGKFENGVAEGMVDPS 504
           P D L NT+VEVLPF +     E L+  +    +  R  DGY +IG F  GVAEG VDP+
Sbjct: 474 PEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPA 533

Query: 505 LNPISAFRLSVIQNSAVWAILNEIHIKKA 533
             P+ A RLS+  +S VW IL+EI +KKA
Sbjct: 534 FGPLEALRLSIQTDSPVWVILSEIFLKKA 562


>gi|166197698 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase C [Homo sapiens]
          Length = 478

 Score =  229 bits (583), Expect = 6e-60
 Identities = 129/397 (32%), Positives = 214/397 (53%), Gaps = 25/397 (6%)

Query: 137 IVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEF 196
           + +G+ +VKR+  +YL+ET+ S+ +    EE  +  +VV + + +  +   +V ++ ++F
Sbjct: 101 LTIGLSSVKRKKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKF 160

Query: 197 SKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYY 256
           +  I +G + VI  PE YYP L  LK  + D ++RV++R+KQN+DY FL+ +      YY
Sbjct: 161 AHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYY 220

Query: 257 IQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFY 316
           + LEDD+   +N+   IK     L    W+ LEFS+LG+IGK++ + DL  +  F+ MFY
Sbjct: 221 VMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFY 280

Query: 317 KEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLT 376
           +E P DWLL H   +     +K+            IRF+PSLFQH+G +SS  G   KL 
Sbjct: 281 QEMPCDWLLTHFRGLLA---QKNV-----------IRFKPSLFQHMGYYSSYKGTENKLK 326

Query: 377 DKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMG-EDFFWAITPIAGDYILFKFDK 435
           D D+ +     I  NPPA + T++ V++ +   K Y   +++FW   P  GD  +  F+ 
Sbjct: 327 DDDFEEE-SFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFEN 385

Query: 436 PVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFENG 495
           P+ ++    ++G ++   DIL +  ++V     E +  SK+   +R    Y R+G+F+NG
Sbjct: 386 PIIIKKIKVNTGTEDRQNDILHHGALDV----GENVMPSKQ---RRQCSTYLRLGEFKNG 438

Query: 496 VAE--GMVDPSLNPISAFRLSVIQNSAVWAILNEIHI 530
             E  G+       I   R+ V +    W I+  I I
Sbjct: 439 NFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSISI 475


>gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 246 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 305
           M +A     Y++ LED I     +   I +         W+ILEFS L   GK+F   D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 306 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 365
           + +  F  +F+K+ P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 366 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 421
           S    +   ++K  D+ + +P       NP A V T +       L+ TY + ++ +  +
Sbjct: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158

Query: 422 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 453
            P+ G+Y+    D+P     + V  Y    G Q  PG
Sbjct: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194


>gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 246 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 305
           M +A     Y++ LED I     +   I +         W+ILEFS L   GK+F   D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 306 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 365
           + +  F  +F+K+ P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 366 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 421
           S    +   ++K  D+ + +P       NP A V T +       L+ TY + ++ +  +
Sbjct: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158

Query: 422 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 453
            P+ G+Y+    D+P     + V  Y    G Q  PG
Sbjct: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194


>gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 246 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 305
           M +A     Y++ LED I     +   I +         W+ILEFS L   GK+F   D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 306 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 365
           + +  F  +F+K+ P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 366 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 421
           S    +   ++K  D+ + +P       NP A V T +       L+ TY + ++ +  +
Sbjct: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158

Query: 422 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 453
            P+ G+Y+    D+P     + V  Y    G Q  PG
Sbjct: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194


>gi|100814339 coiled-coil domain containing 146 [Homo sapiens]
          Length = 955

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 31  KEKLIAYQREFLALKERLRIAEHRISQRSSELNTIVQQFKRVGAETNGSKDALNKFSDNT 90
           +E+L+ YQ E+ A+KER    ++R++    E   IV++F+++  +    +  +    ++T
Sbjct: 124 REQLLKYQNEYNAVKEREFHNQYRLNSLKEEKIIIVKEFEKI-TKPGEMEKKMKILREST 182

Query: 91  LKLLKELTSKKSLQVPSIYYHL----PHLLKNEGSLQ 123
            +L KE+  KK L++ ++   L      LLK +  L+
Sbjct: 183 EELRKEIMQKK-LEIKNLREDLASKQKQLLKEQKELE 218


>gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo
           sapiens]
          Length = 232

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/56 (30%), Positives = 26/56 (46%)

Query: 23  WYTTWQNGKEKLIAYQREFLALKERLRIAEHRISQRSSELNTIVQQFKRVGAETNG 78
           W  +WQ  K+   A+QRE    KER R+A+        +   +  Q K++  E  G
Sbjct: 86  WEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEELEG 141


>gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens]
          Length = 920

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 19/105 (18%)

Query: 87  SDNTLKL-----LKELTSKKSLQVPSIYYHLPHLLKNEGSLQPAVQIGNGRTGVSIVMGI 141
           +DNTL+      +K   +K+ + + S  Y + H+    G L+  V + +GRT  S +MG 
Sbjct: 242 TDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHIT---GRLRLRVSLSHGRTVPSQIMG- 297

Query: 142 PTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVH 186
                     L+   H+L      E ++DC + V     D++ ++
Sbjct: 298 ----------LVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIY 332


>gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens]
          Length = 901

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 19/105 (18%)

Query: 87  SDNTLKL-----LKELTSKKSLQVPSIYYHLPHLLKNEGSLQPAVQIGNGRTGVSIVMGI 141
           +DNTL+      +K   +K+ + + S  Y + H+    G L+  V + +GRT  S +MG 
Sbjct: 223 TDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHIT---GRLRLRVSLSHGRTVPSQIMG- 278

Query: 142 PTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVH 186
                     L+   H+L      E ++DC + V     D++ ++
Sbjct: 279 ----------LVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIY 313


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
            sapiens]
          Length = 1972

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 217  DLTNLKETFGDSKERVRWRTKQNLDYCF-LMMYAQEKGIYYIQLEDDIIVKQNYFNTIKN 275
            D+ +L     D++E ++  T+Q L+    L    +E+     QL++++  KQN    I  
Sbjct: 1309 DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHIST 1368

Query: 276  FALQLSSEEWMILEFS 291
              +QLS  +  + +F+
Sbjct: 1369 LNIQLSDSKKKLQDFA 1384


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
            sapiens]
          Length = 1979

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 217  DLTNLKETFGDSKERVRWRTKQNLDYCF-LMMYAQEKGIYYIQLEDDIIVKQNYFNTIKN 275
            D+ +L     D++E ++  T+Q L+    L    +E+     QL++++  KQN    I  
Sbjct: 1316 DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHIST 1375

Query: 276  FALQLSSEEWMILEFS 291
              +QLS  +  + +F+
Sbjct: 1376 LNIQLSDSKKKLQDFA 1391


>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
            sapiens]
          Length = 1945

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 217  DLTNLKETFGDSKERVRWRTKQNLDYCF-LMMYAQEKGIYYIQLEDDIIVKQNYFNTIKN 275
            D+ +L     D++E ++  T+Q L+    L    +E+     QL++++  KQN    I  
Sbjct: 1316 DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHIST 1375

Query: 276  FALQLSSEEWMILEFS 291
              +QLS  +  + +F+
Sbjct: 1376 LNIQLSDSKKKLQDFA 1391


>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
            sapiens]
          Length = 1938

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 217  DLTNLKETFGDSKERVRWRTKQNLDYCF-LMMYAQEKGIYYIQLEDDIIVKQNYFNTIKN 275
            D+ +L     D++E ++  T+Q L+    L    +E+     QL++++  KQN    I  
Sbjct: 1309 DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHIST 1368

Query: 276  FALQLSSEEWMILEFS 291
              +QLS  +  + +F+
Sbjct: 1369 LNIQLSDSKKKLQDFA 1384


>gi|148612801 KIAA1009 protein [Homo sapiens]
          Length = 1403

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 17/86 (19%)

Query: 28   QNGKEKLIAYQREFLALKERLRIAEHRISQRSSELNTIVQQFKRVGAETNGSKDA----- 82
            +  KE      + F+ L+++++  E R +QR  EL  I+QQ  +V  ET  +K+      
Sbjct: 1299 REAKENHTPEMKHFVGLEKKIKQMEMRHAQREQELQQIIQQTHQV-VETEQNKEVEKWKR 1357

Query: 83   --------LNKFS---DNTLKLLKEL 97
                    L KF    D+ L +L+EL
Sbjct: 1358 LAQLKNRELEKFRTELDSILDVLREL 1383


>gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]
          Length = 284

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 33  KLIAYQREFLALKERLRIAEHRISQRSSELNTIVQQFKRVGAETNGSKDALNKFSDNTLK 92
           KL+  + E    +ER  +AE R  Q   EL T+ Q  K + A         +K+ +  +K
Sbjct: 168 KLVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEE-IK 226

Query: 93  LLKE 96
           LL+E
Sbjct: 227 LLEE 230


>gi|224922812 tropomyosin 2 (beta) isoform 3 [Homo sapiens]
          Length = 231

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 33  KLIAYQREFLALKERLRIAEHRISQRSSELNTIVQQFKRVGAETNGSKDALNKFSDNTLK 92
           KL+  + E    +ER  +AE R  Q   EL T+ Q  K + A         +K+ +  +K
Sbjct: 115 KLVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEE-IK 173

Query: 93  LLKE 96
           LL+E
Sbjct: 174 LLEE 177


>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
          Length = 3639

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 24   YTTWQNGKEKLIAYQREFLALKERLRIAE----HRISQRSSELNTIVQQFKRVGAETNGS 79
            Y TW   +E+L A Q+E L L+E  R+ E      +S ++S L + V++ +++  +    
Sbjct: 2000 YQTWARKQERLQAEQQEQLFLRECGRLEEILAAQEVSLKTSALGSSVEEVEQLIRKHEVF 2059

Query: 80   KDALNKFSDNTLKLLKELTSKKSLQVPSIYYHLPHLLK 117
               L         L + L   K+L+ P +   LP LL+
Sbjct: 2060 LKVLTAQDKKEAALRERL---KTLRRPRVRDRLPILLQ 2094


>gi|94721321 coiled-coil domain containing 11 [Homo sapiens]
          Length = 514

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 7/70 (10%)

Query: 170 DCVIVVFIGETDI-DYVHGVVANLEKEFSKEISSGLVEVISPPES-YYPDLTNLKETFGD 227
           DC I+  +    I D V G + N+E+  +K     L E+++  E+ Y+ ++   KET  +
Sbjct: 71  DCKILDSLVRARIKDAVQGFIINIEERRNK-----LRELLALEENEYFTEMQLKKETIEE 125

Query: 228 SKERVRWRTK 237
            K+R+R +TK
Sbjct: 126 KKDRMREKTK 135


>gi|22748701 zinc finger protein 641 [Homo sapiens]
          Length = 438

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 272 TIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIF 313
           TIK+ +L  S EEW  L+ SQ  F G+     +  ++V   F
Sbjct: 110 TIKDVSLCFSQEEWRSLDPSQTDFYGEYVMQENCGIVVSLRF 151


>gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens]
          Length = 1280

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 37   YQREFLALKERLRIAEHRISQRSSELNTIVQQFKRV----GAETNGSKDALNKFSDNTLK 92
            Y++E   LKERLR++  R+ +    L    QQ +++     A    S++ L +  +    
Sbjct: 1130 YEQEITKLKERLRVSSRRLEEYERRLLVQEQQMQKLLLEYKARLEDSEERLRRQQEEKDS 1189

Query: 93   LLKELTSK 100
             +K + S+
Sbjct: 1190 QMKSIISR 1197


>gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens]
          Length = 1139

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 37   YQREFLALKERLRIAEHRISQRSSELNTIVQQFKRV----GAETNGSKDALNKFSDNTLK 92
            Y++E   LKERLR++  R+ +    L    QQ +++     A    S++ L +  +    
Sbjct: 989  YEQEITKLKERLRVSSRRLEEYERRLLVQEQQMQKLLLEYKARLEDSEERLRRQQEEKDS 1048

Query: 93   LLKELTSK 100
             +K + S+
Sbjct: 1049 QMKSIISR 1056


>gi|154090997 coiled-coil domain containing 13 [Homo sapiens]
          Length = 715

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 28  QNGKEKLIA----YQREFLALKERLRIAEHRISQRSSELNTIVQQFKRVGAETNGSKDAL 83
           Q G EKL +     QRE   LK++      R    SSE+ T+  Q   +  +     + +
Sbjct: 325 QEGLEKLASERDVLQRELEELKKKFEGMRSRNKLLSSEMKTLKSQMGTLVEKGRHDDELI 384

Query: 84  NKFSDNTLKLLKELTSKKSLQVPSI---YYHLPHLLKNE 119
           +   D  LK L+E+    SLQ        +HL   L +E
Sbjct: 385 DALMDQ-LKQLQEILGSLSLQEEKTRVSQHHLDQQLNSE 422


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,378,390
Number of Sequences: 37866
Number of extensions: 857787
Number of successful extensions: 2183
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2152
Number of HSP's gapped (non-prelim): 30
length of query: 535
length of database: 18,247,518
effective HSP length: 107
effective length of query: 428
effective length of database: 14,195,856
effective search space: 6075826368
effective search space used: 6075826368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.