Guide to the Human Genome
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Name: MGAT4B Sequence: fasta or formatted (548aa) NCBI GI: 7710152
Description:

alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform 1

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [563aa] alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransf...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         31           2
 C cysteine            0.9          5           1
 D aspartate           6.0         33           2
 E glutamate           6.8         37           1
 F phenylalanine       6.4         35           3
 G glycine             4.9         27           1
 H histidine           3.3         18           2
 I isoleucine          4.4         24           1
 K lysine              6.2         34           2
 L leucine            12.4         68           3
 M methionine          1.5          8           2
 N asparagine          2.6         14           1
 P proline             5.3         29           2
 Q glutamine           4.4         24           2
 R arginine            6.8         37           2
 S serine              7.7         42           2
 T threonine           4.2         23           1
 V valine              6.2         34           2
 W tryptophan          1.6          9           1
 Y tyrosine            2.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos... 
MGAT4B                0.941   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco...
MGAT4A                0.575   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...
MGAT4A                0.475   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...
MGAT4C                0.172   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...
LOC401980             0.042   PREDICTED: similar to hCG1811644 
LOC401980             0.042   PREDICTED: similar to hCG1811644 
LOC401980             0.042   PREDICTED: similar to hCG1811644 
OLFML3                0.013   olfactomedin-like 3 
NR1H3                 0.007   nuclear receptor subfamily 1, group H, member 3 iso...
DYNC1I1               0.006   dynein, cytoplasmic 1, intermediate chain 1 isoform...
KCNJ15                0.005   potassium inwardly-rectifying channel J15 
KCNJ15                0.005   potassium inwardly-rectifying channel J15 
KCNJ15                0.005   potassium inwardly-rectifying channel J15 
RPS6KC1               0.005   ribosomal protein S6 kinase, 52kDa, polypeptide 1 i...
RPS6KC1               0.005   ribosomal protein S6 kinase, 52kDa, polypeptide 1 is...
DYNC1I1               0.004   dynein, cytoplasmic 1, intermediate chain 1 isoform a...
DYNC1I1               0.004   dynein, cytoplasmic 1, intermediate chain 1 isoform...
USP53                 0.004   ubiquitin specific protease 53 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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