Guide to the Human Genome
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Name: MGAT4A Sequence: fasta or formatted (535aa) NCBI GI: 6912502
Description:

alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform 1

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [423aa] alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransf...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         23           1
 C cysteine            0.7          4           1
 D aspartate           4.7         25           2
 E glutamate           7.7         41           2
 F phenylalanine       5.2         28           2
 G glycine             5.2         28           1
 H histidine           2.6         14           1
 I isoleucine          7.7         41           2
 K lysine              8.4         45           2
 L leucine            11.2         60           3
 M methionine          1.9         10           2
 N asparagine          4.9         26           1
 P proline             3.9         21           2
 Q glutamine           3.9         21           2
 R arginine            3.7         20           1
 S serine              6.9         37           2
 T threonine           5.2         28           2
 V valine              6.4         34           2
 W tryptophan          1.5          8           1
 Y tyrosine            3.9         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos... 
MGAT4A                0.736   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...
MGAT4B                0.594   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...
MGAT4B                0.570   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco...
MGAT4C                0.194   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...
LOC401980             0.037   PREDICTED: similar to hCG1811644 
LOC401980             0.037   PREDICTED: similar to hCG1811644 
LOC401980             0.037   PREDICTED: similar to hCG1811644 
CCDC146               0.011   coiled-coil domain containing 146 
UNKL                  0.007   unkempt homolog (Drosophila)-like isoform 1 
NPAS3                 0.007   neuronal PAS domain protein 3 isoform 2 
NPAS3                 0.007   neuronal PAS domain protein 3 isoform 1 
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
KIAA1009              0.006   KIAA1009 protein 
TPM2                  0.006   tropomyosin 2 (beta) isoform 2 
TPM2                  0.006   tropomyosin 2 (beta) isoform 3 
SPTBN5                0.006   spectrin, beta, non-erythrocytic 5 
CCDC11                0.005   coiled-coil domain containing 11 
ZNF641                0.005   zinc finger protein 641 
RASAL2                0.004   RAS protein activator like 2 isoform 2 
RASAL2                0.004   RAS protein activator like 2 isoform 1 
CCDC13                0.004   coiled-coil domain containing 13 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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