Guide to the Human Genome
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Name: MGAT4A Sequence: fasta or formatted (423aa) NCBI GI: 237512959
Description:

alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform 2

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [535aa] alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransf...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         15           1
 C cysteine            0.9          4           1
 D aspartate           5.7         24           2
 E glutamate           8.0         34           2
 F phenylalanine       5.9         25           2
 G glycine             5.2         22           1
 H histidine           2.4         10           1
 I isoleucine          7.8         33           2
 K lysine              8.0         34           1
 L leucine            10.2         43           3
 M methionine          2.4         10           2
 N asparagine          4.3         18           1
 P proline             4.7         20           2
 Q glutamine           3.8         16           1
 R arginine            3.1         13           1
 S serine              6.9         29           2
 T threonine           4.0         17           2
 V valine              7.1         30           2
 W tryptophan          1.9          8           2
 Y tyrosine            4.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc... 
MGAT4A                0.923   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...
MGAT4B                0.616   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco...
MGAT4B                0.616   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...
MGAT4C                0.240   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...
LOC401980             0.047   PREDICTED: similar to hCG1811644 
LOC401980             0.047   PREDICTED: similar to hCG1811644 
LOC401980             0.047   PREDICTED: similar to hCG1811644 
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CCDC11                0.006   coiled-coil domain containing 11 
ZNF641                0.006   zinc finger protein 641 
TACC1                 0.005   transforming, acidic coiled-coil containing protein...
TACC1                 0.005   transforming, acidic coiled-coil containing protein...
TACC1                 0.005   transforming, acidic coiled-coil containing protein...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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