Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IRAK3 Sequence: fasta or formatted (535aa) NCBI GI: 216547504
Description:

interleukin-1 receptor-associated kinase 3 isoform b

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [596aa] interleukin-1 receptor-associated kinase 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         26           2
 C cysteine            3.7         20           1
 D aspartate           4.9         26           2
 E glutamate           7.9         42           2
 F phenylalanine       5.0         27           1
 G glycine             4.9         26           2
 H histidine           2.8         15           2
 I isoleucine          5.6         30           2
 K lysine              6.4         34           2
 L leucine            11.4         61           3
 M methionine          2.2         12           1
 N asparagine          4.1         22           3
 P proline             6.2         33           2
 Q glutamine           3.4         18           1
 R arginine            4.7         25           1
 S serine              9.7         52           4
 T threonine           3.7         20           1
 V valine              4.7         25           2
 W tryptophan          1.1          6           1
 Y tyrosine            2.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin-1 receptor-associated kinase 3 isoform ... 
IRAK3                 0.914   interleukin-1 receptor-associated kinase 3 isoform ...
IRAK1                 0.151   interleukin-1 receptor-associated kinase 1 isoform 1...
IRAK1                 0.150   interleukin-1 receptor-associated kinase 1 isoform 2...
IRAK1                 0.133   interleukin-1 receptor-associated kinase 1 isoform 3...
IRAK4                 0.111   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK4                 0.111   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK4                 0.111   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK4                 0.111   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK4                 0.111   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK2                 0.102   interleukin-1 receptor-associated kinase 2 
ZAK                   0.055   MLK-related kinase isoform 2 
ZAK                   0.053   MLK-related kinase isoform 1 
TNNI3K                0.053   TNNI3 interacting kinase isoform b 
TNNI3K                0.053   TNNI3 interacting kinase isoform a 
KIAA1804              0.049   mixed lineage kinase 4 
MAP3K11               0.049   mitogen-activated protein kinase kinase kinase 11 [Ho...
RIPK2                 0.048   receptor-interacting serine-threonine kinase 2 
EPHB1                 0.048   ephrin receptor EphB1 precursor 
MAP3K10               0.046   mitogen-activated protein kinase kinase kinase 10 [H...
EPHA1                 0.044   ephrin receptor EphA1 
MAP3K7                0.042   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.042   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.042   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.042   mitogen-activated protein kinase kinase kinase 7 isof...
MLKL                  0.042   mixed lineage kinase domain-like isoform 1 
EPHB2                 0.042   ephrin receptor EphB2 isoform 1 precursor 
EPHB2                 0.042   ephrin receptor EphB2 isoform 2 precursor 
LIMK1                 0.041   LIM domain kinase 1 
LIMK2                 0.041   LIM domain kinase 2 isoform 2b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press