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Search of human proteins with 68533249
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|68533249 brain expressed, X-linked 1 [Homo sapiens]
(125 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|68533249 brain expressed, X-linked 1 [Homo sapiens] 260 2e-70
gi|14249132 brain expressed X-linked 2 [Homo sapiens] 237 2e-63
gi|189095254 BEX family member 4 [Homo sapiens] 82 1e-16
gi|122937245 BEX family member 4 [Homo sapiens] 82 1e-16
gi|228008288 brain expressed, X-linked 5 [Homo sapiens] 78 2e-15
gi|61175244 brain expressed, X-linked 5 [Homo sapiens] 78 2e-15
gi|46094060 nerve growth factor receptor (TNFRSF16) associated p... 78 2e-15
gi|7657044 nerve growth factor receptor (TNFRSF16) associated pr... 78 2e-15
gi|46094062 nerve growth factor receptor (TNFRSF16) associated p... 64 2e-11
gi|23397409 transcription elongation factor A (SII)-like 7 [Homo... 32 0.16
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 31 0.28
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 0.47
gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens] 30 0.47
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi... 30 0.47
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 29 0.81
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 29 0.81
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 29 1.1
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 29 1.1
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 29 1.1
gi|81295809 pericentrin [Homo sapiens] 29 1.1
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens] 28 1.4
gi|148746195 trichohyalin [Homo sapiens] 28 1.4
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 28 1.4
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 28 1.4
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 28 1.4
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 28 1.4
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 28 1.4
gi|192807309 TNFAIP3 interacting protein 3 [Homo sapiens] 28 2.3
gi|192807305 TNFAIP3 interacting protein 3 [Homo sapiens] 28 2.3
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 28 2.3
>gi|68533249 brain expressed, X-linked 1 [Homo sapiens]
Length = 125
Score = 260 bits (664), Expect = 2e-70
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL 60
MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL
Sbjct: 1 MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL 60
Query: 61 QYRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDE 120
QYRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDE
Sbjct: 61 QYRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDE 120
Query: 121 FCLMP 125
FCLMP
Sbjct: 121 FCLMP 125
>gi|14249132 brain expressed X-linked 2 [Homo sapiens]
Length = 128
Score = 237 bits (604), Expect = 2e-63
Identities = 114/128 (89%), Positives = 121/128 (94%), Gaps = 3/128 (2%)
Query: 1 MESKEKRAVNSLSMENANQENEEK---EQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQ 57
MESKE+RA+N+L +EN NQEN+EK EQVANKGEPLALPL+ EYCVPRGNRRRFRVRQ
Sbjct: 1 MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ 60
Query: 58 PILQYRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH 117
PILQYRWD+MHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH
Sbjct: 61 PILQYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH 120
Query: 118 HDEFCLMP 125
HDEFCLMP
Sbjct: 121 HDEFCLMP 128
>gi|189095254 BEX family member 4 [Homo sapiens]
Length = 120
Score = 81.6 bits (200), Expect = 1e-16
Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 1 MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL 60
MESKE+ A N+L+ ENA QENE EQ + E + L GE P GN RR RVR+ +
Sbjct: 1 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60
Query: 61 QYRWDMMHR-LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHD 119
+RW + +R + +AR +++ER ++ ++ K RE+Q+ H +R + +P D+H
Sbjct: 61 NFRWAIPNRHIEHNEAR---DDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP---DNHY 114
Query: 120 EFCLMP 125
+FCL+P
Sbjct: 115 DFCLIP 120
>gi|122937245 BEX family member 4 [Homo sapiens]
Length = 120
Score = 81.6 bits (200), Expect = 1e-16
Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 1 MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL 60
MESKE+ A N+L+ ENA QENE EQ + E + L GE P GN RR RVR+ +
Sbjct: 1 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60
Query: 61 QYRWDMMHR-LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHD 119
+RW + +R + +AR +++ER ++ ++ K RE+Q+ H +R + +P D+H
Sbjct: 61 NFRWAIPNRHIEHNEAR---DDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP---DNHY 114
Query: 120 EFCLMP 125
+FCL+P
Sbjct: 115 DFCLIP 120
>gi|228008288 brain expressed, X-linked 5 [Homo sapiens]
Length = 111
Score = 77.8 bits (190), Expect = 2e-15
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 14 MENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLGEP 73
MEN +EN+ E+ + E AL GEY P GN + P + D+ +RL +
Sbjct: 1 MENVPKENKVVEKAPVQNEAPAL--GGGEYQEPGGNVKGVWA-PPAPGFGEDVPNRLVDN 57
Query: 74 QARMREE--NMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDEFCLMP 125
+ + +MER EE+R+L K+RE QL +SLR + DPPHHDHHDEFCLMP
Sbjct: 58 IDMIDGDGDDMERFMEEMRELRRKIRELQLRYSLRILIGDPPHHDHHDEFCLMP 111
>gi|61175244 brain expressed, X-linked 5 [Homo sapiens]
Length = 111
Score = 77.8 bits (190), Expect = 2e-15
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 14 MENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLGEP 73
MEN +EN+ E+ + E AL GEY P GN + P + D+ +RL +
Sbjct: 1 MENVPKENKVVEKAPVQNEAPAL--GGGEYQEPGGNVKGVWA-PPAPGFGEDVPNRLVDN 57
Query: 74 QARMREE--NMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDEFCLMP 125
+ + +MER EE+R+L K+RE QL +SLR + DPPHHDHHDEFCLMP
Sbjct: 58 IDMIDGDGDDMERFMEEMRELRRKIRELQLRYSLRILIGDPPHHDHHDEFCLMP 111
>gi|46094060 nerve growth factor receptor (TNFRSF16) associated
protein 1 isoform b [Homo sapiens]
Length = 111
Score = 77.8 bits (190), Expect = 2e-15
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 14 MENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLGEP 73
M N +QENEE EQ GE PL GE P GNRR + R+ +RW + +R
Sbjct: 1 MANIHQENEEMEQPMQNGEE-DRPLGGGEGHQPAGNRRG-QARRLAPNFRWAIPNRQIND 58
Query: 74 QARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTD-PPHHDHHDEFCLMP 125
++ME EE+R++ KLRE QL + LR + + HHDHHDEFCLMP
Sbjct: 59 GMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 111
>gi|7657044 nerve growth factor receptor (TNFRSF16) associated
protein 1 isoform b [Homo sapiens]
Length = 111
Score = 77.8 bits (190), Expect = 2e-15
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 14 MENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLGEP 73
M N +QENEE EQ GE PL GE P GNRR + R+ +RW + +R
Sbjct: 1 MANIHQENEEMEQPMQNGEE-DRPLGGGEGHQPAGNRRG-QARRLAPNFRWAIPNRQIND 58
Query: 74 QARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTD-PPHHDHHDEFCLMP 125
++ME EE+R++ KLRE QL + LR + + HHDHHDEFCLMP
Sbjct: 59 GMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 111
>gi|46094062 nerve growth factor receptor (TNFRSF16) associated
protein 1 isoform a [Homo sapiens]
Length = 101
Score = 64.3 bits (155), Expect = 2e-11
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 25 EQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLGEPQARMREENMER 84
EQ GE PL GE P GNRR + R+ +RW + +R ++ME
Sbjct: 2 EQPMQNGEE-DRPLGGGEGHQPAGNRRG-QARRLAPNFRWAIPNRQINDGMGGDGDDMEI 59
Query: 85 IGEEVRQLMEKLREKQLSHSLRAVSTD-PPHHDHHDEFCLMP 125
EE+R++ KLRE QL + LR + + HHDHHDEFCLMP
Sbjct: 60 FMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 101
>gi|23397409 transcription elongation factor A (SII)-like 7 [Homo
sapiens]
Length = 100
Score = 31.6 bits (70), Expect = 0.16
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 14 MENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLGEP 73
M+ +ENE K + + P E GN R+ R+ Q + +++ D+ +R +
Sbjct: 1 MQKPCKENEGKPKCSVPKREEKRPYGEFERQQTEGNFRQ-RLLQSLEEFKEDIDYRHFKD 59
Query: 74 QARMRE-ENMERIGEEVRQLMEKLREKQLSH 103
+ RE + MER EE+R L +K R +H
Sbjct: 60 EEMTREGDEMERCLEEIRGLRKKFRALHSNH 90
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 30.8 bits (68), Expect = 0.28
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 12 LSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLG 71
L+ + A +E E K + +K E A L + V R R+ Q++ L
Sbjct: 148 LAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLE 207
Query: 72 EPQARMREENMERI-----GEEVRQLMEKLR-EKQLSHSLRAV 108
+PQ R R E ER+ G E + +K+R EK S L A+
Sbjct: 208 DPQERERRERRERMERETNGNEDEEGRQKIREEKDKSKELHAI 250
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 30.0 bits (66), Expect = 0.47
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 47 RGNRRRFRVRQPILQYRWDMMHRLGEPQARMRE-ENMERIGEEVRQLMEKLREKQ 100
R + R ++ ++Q + ++GE + +M+E E M R E++R+ EK+RE++
Sbjct: 533 REQEEKIREQEEMMQ---EQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIREQK 584
Score = 28.9 bits (63), Expect = 1.1
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 64 WDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 100
W+ ++ E + +M E+ R EE RQ EK+RE++
Sbjct: 373 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQE 409
Score = 26.9 bits (58), Expect = 4.0
Identities = 18/97 (18%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 4 KEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYR 63
+++ ++ ++ +E+E++ + E + + + + R ++ + +
Sbjct: 441 RQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQ 500
Query: 64 WDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 100
+ MH E + R +EE M R E++R+ EK+RE++
Sbjct: 501 EEKMHDQ-EEKIREQEEKMWRQEEKIREQEEKIREQE 536
>gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]
Length = 450
Score = 30.0 bits (66), Expect = 0.47
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 5 EKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVP 46
+K V S E+ +E EE+E+ + EP A+P+ C P
Sbjct: 284 QKEGVCGASPEDEAEEEEEEEEEEEECEPQAVPVSPASACSP 325
>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
sapiens]
Length = 437
Score = 30.0 bits (66), Expect = 0.47
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 2 ESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGE 42
+ ++++ +S S E A +E E KE++ G +A P +AG+
Sbjct: 284 KDRDRKRRSSRSRERARRERERKEELRGGGGDMAEPSEAGD 324
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 29.3 bits (64), Expect = 0.81
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 ESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQ 61
E +EK M +E +E+E+ + E R ++ R ++ ++
Sbjct: 408 EQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKI-----------REQEKKIREQEEKIR 456
Query: 62 YRWDMMH----RLGEPQARM---------REENMERIGEEVRQLMEKLREKQ 100
+ +MM ++GE + +M +EE M R E++R+ +K+RE++
Sbjct: 457 EQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQE 508
Score = 28.9 bits (63), Expect = 1.1
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 64 WDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 100
W+ ++ E + +M E+ R EE RQ EK+RE++
Sbjct: 340 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQE 376
Score = 26.2 bits (56), Expect = 6.8
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 1 MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL 60
+E K E QE E+ + + E A E R + R ++ ++
Sbjct: 349 LEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKI--REQEEKIREQEEMM 406
Query: 61 QYRWDMMHRLGEPQARM---------REENMERIGEEVRQLMEKLREKQ 100
Q + ++GE + +M +EE M R E++R+ +K+RE++
Sbjct: 407 Q---EQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQE 452
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 29.3 bits (64), Expect = 0.81
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 22 EEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLGEPQARMREEN 81
+EKEQ+ K L L + + + + + +R+ + Q + D +RL E +EN
Sbjct: 1171 KEKEQLQKK---LQEALTSRKAILKKAQEKERHLREELKQQK-DDYNRLQEQFDEQSKEN 1226
Query: 82 MERIGEEVRQLMEKLRE 98
E IG+++RQL ++RE
Sbjct: 1227 -ENIGDQLRQLQIQVRE 1242
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 28.9 bits (63), Expect = 1.1
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 64 WDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 100
W+ ++ E + +M E+ R EE RQ EK+RE++
Sbjct: 387 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQE 423
Score = 26.9 bits (58), Expect = 4.0
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 62 YRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDE 120
+R + R E + R +EE M R E++R+ E RE++ H + + + D+
Sbjct: 513 WRQEEKIREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDK 571
Score = 25.8 bits (55), Expect = 8.9
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 64 WDMMHRLGEPQARMR--EENMERIGEEVRQLMEKLREKQ 100
W ++ E + ++R EE + R E++R+ EK+RE++
Sbjct: 492 WRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQE 530
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 28.9 bits (63), Expect = 1.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 64 WDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 100
W+ RL E + RMRE+ EE Q E++RE++
Sbjct: 362 WEQDERLREKEERMREQEKMWEQEEKMQEEERIRERE 398
Score = 27.7 bits (60), Expect = 2.3
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 17/115 (14%)
Query: 3 SKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGN---------RRRF 53
++E + N+ E EK ++ + L L+ ++ +P+ R+
Sbjct: 182 NEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEE 241
Query: 54 RVRQPILQYR------WDMMHRLGEPQARMRE--ENMERIGEEVRQLMEKLREKQ 100
+R+ + R W RL E + +MRE E M R + +R+ ++LRE++
Sbjct: 242 ELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQE 296
Score = 27.3 bits (59), Expect = 3.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 61 QYRWDMMHRLGEPQARMREENMERIGEEVR--QLMEKLREKQ 100
Q WD R+ E R+RE+ ER+ E+ + Q EK+RE++
Sbjct: 500 QKMWDQEERMWEQDERLREKE-ERMREQKKMWQQEEKMREEK 540
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 28.9 bits (63), Expect = 1.1
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 64 WDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 100
W+ ++ E + +M E+ R EE RQ EK+RE++
Sbjct: 434 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQE 470
Score = 26.6 bits (57), Expect = 5.2
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 47 RGNRRRFRVRQPILQYRWDMMHRLGEPQARM--REENMERIGEEVRQLMEKLREKQ 100
R + R ++ + Q + ++GE + +M +EE M+ E++R+ EK+RE++
Sbjct: 595 REQEEKIREQEEMTQ---EQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQE 647
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 28.9 bits (63), Expect = 1.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 70 LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDEFCL 123
L E AR +EE + R G+E +L EKL + ++ + + V T + + CL
Sbjct: 306 LREQHAREKEEVVLRCGQEAAELKEKL-QSEMEKNAQIVKTLKEDWESEKDLCL 358
>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 28.5 bits (62), Expect = 1.4
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 64 WDMMHRLGEPQARMREENM----ERIGEEVRQLMEKLREKQ 100
W+ RL E + RMRE+ M E++ E+ + EK++E++
Sbjct: 84 WEQDERLREKEERMREQKMWQQVEKMREKKKTQEEKMQEQE 124
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 28.5 bits (62), Expect = 1.4
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 14 MENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYRWDMMHRLGEP 73
+E +E+E+ + E L G+ + + R+FR + +LQ R E
Sbjct: 1583 LEEQKVRRQEQERKFMEDEQ-QLRRQEGQQQLRQERDRKFREDEQLLQER--------EE 1633
Query: 74 QARMREENMERIGEEVRQLMEKLREKQLSH 103
Q R+E + EE QL + RE+QL H
Sbjct: 1634 QQLHRQERDRKFLEEEPQLRRQEREQQLRH 1663
Score = 27.3 bits (59), Expect = 3.1
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 43 YCVPRGNRRRFRVRQPIL---QYRWDMMHRLGEPQARMREENMERIGEEVRQLMEK 95
YC R N + ++ L Q + D+ H LGE Q R RE+ R + R E+
Sbjct: 1241 YCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEE 1296
Score = 26.9 bits (58), Expect = 4.0
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 19/98 (19%)
Query: 4 KEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYR 63
+E+ + L + +E +E+EQ + RR ++R+ + R
Sbjct: 273 EEEEQLRKLERQELRRERQEEEQQQQR------------------LRREQQLRRKQEEER 314
Query: 64 WDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQL 101
+ E Q R RE+ ER +++R+ E+ RE+QL
Sbjct: 315 REQQEERREQQER-REQQEERREQQLRREQEERREQQL 351
Score = 26.9 bits (58), Expect = 4.0
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 17/94 (18%)
Query: 2 ESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQ 61
E KE + + S E EE+E+ + E R+FR + +LQ
Sbjct: 1303 EQKEAKRRDRKSQEEKQLLREEREEKRRRQE----------------TDRKFREEEQLLQ 1346
Query: 62 YRWDMMHRLGEPQARMREENMERIGEEVRQLMEK 95
R + R E + REE + R E+ R+ +E+
Sbjct: 1347 EREEQPLRRQERDRKFREEEL-RHQEQGRKFLEE 1379
Score = 26.9 bits (58), Expect = 4.0
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 7 RAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNR-RRFRVRQPILQYRWD 65
R L E ++ +E+ E L + E + R R R+FR + + Q R +
Sbjct: 1726 REEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREE 1785
Query: 66 MMHRLGEPQARMREENMERIGEEVRQLMEKLRE 98
R E + REE R E +QL + R+
Sbjct: 1786 QQLRSQESDRKFREEEQLRQEREEQQLRPQQRD 1818
Score = 26.6 bits (57), Expect = 5.2
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 2 ESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQ 61
E ++++ + QE E +EQ + E E + RR ++R+ +
Sbjct: 293 EEQQQQRLRREQQLRRKQEEERREQQEERREQQ-------ERREQQEERREQQLRREQEE 345
Query: 62 YRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQL 101
R + R E + RE+ + R EE R+ + RE+QL
Sbjct: 346 RREQQLRR--EQEEERREQQLRREQEEERREQQLRREQQL 383
Score = 25.8 bits (55), Expect = 8.9
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 51 RRFRVRQPILQYRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 100
R+FR + +LQ GE Q R+E + EE +QL + RE++
Sbjct: 1667 RKFREEEQLLQE--------GEEQQLRRQERDRKFREEEQQLRRQERERK 1708
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 28.5 bits (62), Expect = 1.4
Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 3 SKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQY 62
+K + + ++++ + E E+ ++ L +D E + + + R + +
Sbjct: 1008 AKVVQEAHQQTLDDLHMEEEKLSSLSKANLKLEQQVDELEGALEQERKARMNCEREL--- 1064
Query: 63 RWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHS 104
H+L E ++ E+ME + R L E+LR+K+L S
Sbjct: 1065 -----HKL-EGNLKLNRESMENLESSQRHLAEELRKKELELS 1100
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 28.5 bits (62), Expect = 1.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 2 ESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRF 53
+ K + S +++ E EEKE++ K +P++LP + + R R+
Sbjct: 321 DDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERW 372
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 28.5 bits (62), Expect = 1.4
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 4 KEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYR 63
K++ + E + E EE+E +GEP ++ GE + RR F Q + R
Sbjct: 311 KKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTL----RRDFLRLQQENKER 366
Query: 64 WDMMHR---LGEPQARMREENMERIGEEVRQLMEKLREKQ 100
+ + R L E Q R +EE ++ E ++ +E+ +E++
Sbjct: 367 SEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQR 406
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 28.5 bits (62), Expect = 1.4
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 4 KEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYR 63
K++ + E + E EE+E +GEP ++ GE + RR F Q + R
Sbjct: 311 KKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTL----RRDFLRLQQENKER 366
Query: 64 WDMMHR---LGEPQARMREENMERIGEEVRQLMEKLREKQ 100
+ + R L E Q R +EE ++ E ++ +E+ +E++
Sbjct: 367 SEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQR 406
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 28.5 bits (62), Expect = 1.4
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 4 KEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPILQYR 63
K++ + E + E EE+E +GEP ++ GE + RR F Q + R
Sbjct: 311 KKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTL----RRDFLRLQQENKER 366
Query: 64 WDMMHR---LGEPQARMREENMERIGEEVRQLMEKLREKQ 100
+ + R L E Q R +EE ++ E ++ +E+ +E++
Sbjct: 367 SEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQR 406
>gi|192807309 TNFAIP3 interacting protein 3 [Homo sapiens]
Length = 325
Score = 27.7 bits (60), Expect = 2.3
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 4 KEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGE-YCVPRGNRRRFRVRQPILQY 62
K+++ + ++ + Q KE K L LDA E + R R R+ Q
Sbjct: 45 KQRKELLEVNQQWDQQFRSMKELYERKVAELKTKLDAAERFLSTREKDPHQRQRKDDRQR 104
Query: 63 RWDMMHRLGEPQARMREENMERIGEEVRQLMEK 95
D L + + E+ ER+ EE+ +L E+
Sbjct: 105 EDDRQRDLTRDRLQREEKEKERLNEELHELKEE 137
>gi|192807305 TNFAIP3 interacting protein 3 [Homo sapiens]
Length = 325
Score = 27.7 bits (60), Expect = 2.3
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 4 KEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGE-YCVPRGNRRRFRVRQPILQY 62
K+++ + ++ + Q KE K L LDA E + R R R+ Q
Sbjct: 45 KQRKELLEVNQQWDQQFRSMKELYERKVAELKTKLDAAERFLSTREKDPHQRQRKDDRQR 104
Query: 63 RWDMMHRLGEPQARMREENMERIGEEVRQLMEK 95
D L + + E+ ER+ EE+ +L E+
Sbjct: 105 EDDRQRDLTRDRLQREEKEKERLNEELHELKEE 137
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 27.7 bits (60), Expect = 2.3
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 70 LGEPQARMREE---NMERIGEEVRQLMEKLRE 98
LGE +A++ E N+ERI E+ QLM ++++
Sbjct: 689 LGELEAKLNENLRRNIERINNEIDQLMNQMQQ 720
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,075,990
Number of Sequences: 37866
Number of extensions: 215194
Number of successful extensions: 1413
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1219
Number of HSP's gapped (non-prelim): 215
length of query: 125
length of database: 18,247,518
effective HSP length: 90
effective length of query: 35
effective length of database: 14,839,578
effective search space: 519385230
effective search space used: 519385230
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.