Guide to the Human Genome
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Name: RHCE Sequence: fasta or formatted (354aa) NCBI GI: 66346670
Description:

Rhesus blood group, CcEe antigens isoform 2

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [417aa] Rhesus blood group, CcEe antigens isoform 1
alt prot [266aa] Rhesus blood group, CcEe antigens isoform 3
alt prot [267aa] Rhesus blood group, CcEe antigens isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         35           2
 C cysteine            1.7          6           1
 D aspartate           2.8         10           1
 E glutamate           1.4          5           1
 F phenylalanine       5.1         18           2
 G glycine             7.1         25           2
 H histidine           2.8         10           1
 I isoleucine          4.0         14           1
 K lysine              2.8         10           1
 L leucine            13.8         49           2
 M methionine          4.0         14           1
 N asparagine          3.1         11           1
 P proline             5.4         19           2
 Q glutamine           3.4         12           1
 R arginine            4.0         14           2
 S serine              9.9         35           2
 T threonine           5.1         18           1
 V valine              8.5         30           2
 W tryptophan          2.5          9           1
 Y tyrosine            2.8         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rhesus blood group, CcEe antigens isoform 2 
RHCE                  0.862   Rhesus blood group, CcEe antigens isoform 1 
RHD                   0.796   Rh blood group D antigen isoform 2 
RHD                   0.796   Rh blood group D antigen isoform 1 
RHCE                  0.422   Rhesus blood group, CcEe antigens isoform 4 
RHCE                  0.421   Rhesus blood group, CcEe antigens isoform 3 
RHAG                  0.249   Rh-associated glycoprotein 
RHCG                  0.231   Rh family, C glycoprotein 
RHBG                  0.213   Rhesus blood group, B glycoprotein 
CYB561D1              0.009   cytochrome b-561 domain containing 1 isoform 3 [Hom...
CYB561D1              0.009   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.009   cytochrome b-561 domain containing 1 isoform 2 [Homo...
MFSD10                0.006   major facilitator superfamily domain containing 10 ...
C9orf96               0.006   hypothetical protein LOC169436 
MFSD10                0.006   major facilitator superfamily domain containing 10 ...
PCDH8                 0.006   protocadherin 8 isoform 2 precursor 
PCDH8                 0.006   protocadherin 8 isoform 1 precursor 
TMBIM1                0.006   transmembrane BAX inhibitor motif containing 1 [Homo...
CCDC71                0.006   coiled-coil domain containing 71 
SYNPO2                0.004   synaptopodin 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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