Guide to the Human Genome
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Name: RHD Sequence: fasta or formatted (417aa) NCBI GI: 20336225
Description:

Rh blood group D antigen isoform 1

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [321aa] Rh blood group D antigen isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         39           2
 C cysteine            1.2          5           2
 D aspartate           2.6         11           2
 E glutamate           2.2          9           1
 F phenylalanine       5.5         23           2
 G glycine             8.2         34           2
 H histidine           2.4         10           1
 I isoleucine          6.0         25           2
 K lysine              3.4         14           1
 L leucine            15.6         65           3
 M methionine          3.4         14           2
 N asparagine          3.1         13           1
 P proline             3.8         16           1
 Q glutamine           2.4         10           1
 R arginine            2.4         10           2
 S serine              9.1         38           2
 T threonine           4.3         18           1
 V valine              9.6         40           2
 W tryptophan          2.2          9           1
 Y tyrosine            3.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rh blood group D antigen isoform 1 
RHCE                  0.905   Rhesus blood group, CcEe antigens isoform 1 
RHD                   0.740   Rh blood group D antigen isoform 2 
RHCE                  0.686   Rhesus blood group, CcEe antigens isoform 2 
RHCE                  0.343   Rhesus blood group, CcEe antigens isoform 4 
RHCE                  0.341   Rhesus blood group, CcEe antigens isoform 3 
RHAG                  0.271   Rh-associated glycoprotein 
RHCG                  0.242   Rh family, C glycoprotein 
RHBG                  0.225   Rhesus blood group, B glycoprotein 
TMBIM1                0.009   transmembrane BAX inhibitor motif containing 1 [Homo...
GPR128                0.006   G protein-coupled receptor 128 
MTNR1A                0.006   melatonin receptor 1A 
CYB561D1              0.006   cytochrome b-561 domain containing 1 isoform 3 [Hom...
CYB561D1              0.006   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.006   cytochrome b-561 domain containing 1 isoform 2 [Homo...
SLC41A1               0.006   solute carrier family 41 member 1 
SLC12A8               0.005   solute carrier family 12, member 8 
CCDC71                0.005   coiled-coil domain containing 71 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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