Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RHD Sequence: fasta or formatted (321aa) NCBI GI: 189095266
Description:

Rh blood group D antigen isoform 2

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [417aa] Rh blood group D antigen isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         34           2
 C cysteine            0.9          3           1
 D aspartate           2.5          8           1
 E glutamate           1.9          6           1
 F phenylalanine       5.9         19           2
 G glycine             6.9         22           2
 H histidine           2.5          8           1
 I isoleucine          4.7         15           1
 K lysine              3.1         10           1
 L leucine            14.3         46           2
 M methionine          3.7         12           2
 N asparagine          2.8          9           1
 P proline             4.4         14           1
 Q glutamine           2.5          8           1
 R arginine            2.8          9           2
 S serine             10.0         32           2
 T threonine           4.7         15           1
 V valine             10.3         33           2
 W tryptophan          2.2          7           1
 Y tyrosine            3.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rh blood group D antigen isoform 2 
RHD                   0.972   Rh blood group D antigen isoform 1 
RHCE                  0.901   Rhesus blood group, CcEe antigens isoform 2 
RHCE                  0.901   Rhesus blood group, CcEe antigens isoform 1 
RHCE                  0.450   Rhesus blood group, CcEe antigens isoform 4 
RHCE                  0.448   Rhesus blood group, CcEe antigens isoform 3 
RHAG                  0.295   Rh-associated glycoprotein 
RHCG                  0.277   Rh family, C glycoprotein 
RHBG                  0.254   Rhesus blood group, B glycoprotein 
TMBIM1                0.012   transmembrane BAX inhibitor motif containing 1 [Homo...
RMI1                  0.008   RMI1, RecQ mediated genome instability 1, homolog [...
MTNR1A                0.008   melatonin receptor 1A 
CYB561D1              0.008   cytochrome b-561 domain containing 1 isoform 3 [Hom...
CYB561D1              0.008   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.008   cytochrome b-561 domain containing 1 isoform 2 [Homo...
SLC12A8               0.007   solute carrier family 12, member 8 
CCDC71                0.007   coiled-coil domain containing 71 
TMEM138               0.005   transmembrane protein 138 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press