Guide to the Human Genome
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Name: CYB561D1 Sequence: fasta or formatted (229aa) NCBI GI: 32698982
Description:

cytochrome b-561 domain containing 1 isoform 2

Referenced in:

Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt prot [251aa] cytochrome b-561 domain containing 1 isoform 1
alt prot [172aa] cytochrome b-561 domain containing 1 isoform 3
alt prot [133aa] cytochrome b-561 domain containing 1 isoform 4
alt prot [128aa] cytochrome b-561 domain containing 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         27           2
 C cysteine            3.9          9           1
 D aspartate           0.0          0           0
 E glutamate           2.6          6           1
 F phenylalanine       4.8         11           3
 G glycine             6.1         14           1
 H histidine           3.5          8           1
 I isoleucine          4.4         10           2
 K lysine              2.2          5           2
 L leucine            17.9         41           2
 M methionine          3.5          8           1
 N asparagine          0.0          0           0
 P proline             5.2         12           1
 Q glutamine           2.6          6           1
 R arginine            7.0         16           2
 S serine              7.0         16           2
 T threonine           4.8         11           1
 V valine              7.0         16           2
 W tryptophan          3.1          7           1
 Y tyrosine            2.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome b-561 domain containing 1 isoform 2 [Homo... 
CYB561D1              0.902   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.721   cytochrome b-561 domain containing 1 isoform 3 [Hom...
CYB561D2              0.431   cytochrome b-561 domain containing 2 
CYB561D1              0.172   cytochrome b-561 domain containing 1 isoform 5 [Hom...
CYB561D1              0.172   cytochrome b-561 domain containing 1 isoform 4 [Hom...
CYBRD1                0.077   cytochrome b reductase 1 isoform 1 
CYB561                0.057   cytochrome b-561 
CYB561                0.057   cytochrome b-561 
CYB561                0.057   cytochrome b-561 
CYBASC3               0.045   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
CYBASC3               0.045   cytochrome b, ascorbate dependent 3 isoform 1 [Homo...
CYBASC3               0.045   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
RHCE                  0.014   Rhesus blood group, CcEe antigens isoform 2 
RHCE                  0.014   Rhesus blood group, CcEe antigens isoform 4 
RHCE                  0.014   Rhesus blood group, CcEe antigens isoform 3 
RHCE                  0.014   Rhesus blood group, CcEe antigens isoform 1 
SLC12A9               0.011   solute carrier family 12 (potassium/chloride transpo...
RHD                   0.011   Rh blood group D antigen isoform 2 
RHD                   0.011   Rh blood group D antigen isoform 1 
SLC28A1               0.007   solute carrier family 28, member 1 isoform 1 
LMLN                  0.007   leishmanolysin-like isoform 1 
LMLN                  0.007   leishmanolysin-like isoform 2 
LOC100293124          0.007   PREDICTED: similar to patatin-like phospholipase do...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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