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Search of human proteins with 63082035
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63082035 hypothetical protein LOC51149 isoform 2 [Homo
sapiens]
(288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63082035 hypothetical protein LOC51149 isoform 2 [Homo sapiens] 602 e-172
gi|63082033 hypothetical protein LOC51149 isoform 1 [Homo sapiens] 554 e-158
gi|145199237 transcription elongation factor B polypeptide 3 bin... 41 0.001
gi|28557729 hypothetical protein LOC283687 [Homo sapiens] 39 0.004
gi|27262667 colony stimulating factor 1 isoform a precursor [Hom... 38 0.009
gi|27262661 colony stimulating factor 1 isoform a precursor [Hom... 38 0.009
gi|4557733 latent transforming growth factor beta binding protei... 37 0.015
gi|187960090 SMG5 homolog nonsense mediated mRNA decay factor [H... 37 0.015
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 37 0.026
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 37 0.026
gi|62243586 ubiquitin-specific protease 21 [Homo sapiens] 35 0.058
gi|74027267 ubiquitin-specific protease 21 [Homo sapiens] 35 0.058
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re... 35 0.058
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 35 0.076
gi|151301154 mucin 6, gastric [Homo sapiens] 34 0.13
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 34 0.13
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 34 0.13
gi|7706687 Enah/Vasp-like [Homo sapiens] 34 0.13
gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens] 34 0.17
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 34 0.17
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho... 33 0.22
gi|22748699 hypothetical protein LOC121273 [Homo sapiens] 33 0.22
gi|189011568 adenomatous polyposis coli [Homo sapiens] 33 0.38
gi|189011566 adenomatous polyposis coli [Homo sapiens] 33 0.38
gi|53759122 adenomatous polyposis coli [Homo sapiens] 33 0.38
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 33 0.38
gi|44662836 breast cancer anti-estrogen resistance 1 [Homo sapiens] 33 0.38
gi|194272172 double homeobox, 4 [Homo sapiens] 33 0.38
gi|194272217 double homeobox, 4-like [Homo sapiens] 33 0.38
gi|194272216 double homeobox, 4-like [Homo sapiens] 33 0.38
>gi|63082035 hypothetical protein LOC51149 isoform 2 [Homo sapiens]
Length = 288
Score = 602 bits (1552), Expect = e-172
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MASLQRSRVLRCCSCRLFQAHQVKKSVKWTCKACGEKQSFLQEKSQPSESRWLKYLEKDS 60
MASLQRSRVLRCCSCRLFQAHQVKKSVKWTCKACGEKQSFLQEKSQPSESRWLKYLEKDS
Sbjct: 1 MASLQRSRVLRCCSCRLFQAHQVKKSVKWTCKACGEKQSFLQEKSQPSESRWLKYLEKDS 60
Query: 61 QELELEGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQPPCSRGVQDSGGSEVAW 120
QELELEGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQPPCSRGVQDSGGSEVAW
Sbjct: 61 QELELEGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQPPCSRGVQDSGGSEVAW 120
Query: 121 GPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLP 180
GPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLP
Sbjct: 121 GPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLP 180
Query: 181 PRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSG 240
PRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSG
Sbjct: 181 PRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSG 240
Query: 241 SERPCGKTSWDARTPWAEGGPLVLEAQNPRPTRLCDLFITGEDFDDDV 288
SERPCGKTSWDARTPWAEGGPLVLEAQNPRPTRLCDLFITGEDFDDDV
Sbjct: 241 SERPCGKTSWDARTPWAEGGPLVLEAQNPRPTRLCDLFITGEDFDDDV 288
>gi|63082033 hypothetical protein LOC51149 isoform 1 [Homo sapiens]
Length = 343
Score = 554 bits (1427), Expect = e-158
Identities = 280/343 (81%), Positives = 283/343 (82%), Gaps = 55/343 (16%)
Query: 1 MASLQRSRVLRCCSCRLFQAHQVKKSVKWT---------------------CKACGEKQS 39
MASLQRSRVLRCCSCRLFQAHQVKKSVKWT C+ +K +
Sbjct: 1 MASLQRSRVLRCCSCRLFQAHQVKKSVKWTCKACGEKQSFLQAYGEGSGADCRRHVQKLN 60
Query: 40 FLQ----------------------------------EKSQPSESRWLKYLEKDSQELEL 65
LQ EKSQPSESRWLKYLEKDSQELEL
Sbjct: 61 LLQGQVSELPLRSLEETVSASEEENVGHQQAGNVKQQEKSQPSESRWLKYLEKDSQELEL 120
Query: 66 EGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQPPCSRGVQDSGGSEVAWGPQKG 125
EGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQPPCSRGVQDSGGSEVAWGPQKG
Sbjct: 121 EGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQPPCSRGVQDSGGSEVAWGPQKG 180
Query: 126 QAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLPPRKSS 185
QAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLPPRKSS
Sbjct: 181 QAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLPPRKSS 240
Query: 186 HVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSGSERPC 245
HVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSGSERPC
Sbjct: 241 HVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSGSERPC 300
Query: 246 GKTSWDARTPWAEGGPLVLEAQNPRPTRLCDLFITGEDFDDDV 288
GKTSWDARTPWAEGGPLVLEAQNPRPTRLCDLFITGEDFDDDV
Sbjct: 301 GKTSWDARTPWAEGGPLVLEAQNPRPTRLCDLFITGEDFDDDV 343
>gi|145199237 transcription elongation factor B polypeptide 3
binding protein 1 [Homo sapiens]
Length = 1221
Score = 41.2 bits (95), Expect = 0.001
Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 38/192 (19%)
Query: 99 RSTVQPPCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGK 158
++T QPP G++ GG GL +E + C G+L+ P
Sbjct: 316 KATGQPPSKEGLEAEGG------------GLRET---------KETAVQCDVGDLQPPPA 354
Query: 159 ELWSPIQQVTATSSKWAQFVLPPRKSSHV-------DSEQPRSLQRDP---RPAGPAQAK 208
+ SP Q ++ + P +K + D Q + +D RP +A
Sbjct: 355 KPASPAQVQSSQDGGCPKEGKPKKKKTGAPPAPSCKDGAQGKDKTKDKGRGRPVEKPRAD 414
Query: 209 QGTPRAQASREGLSRPTAAVQLPRATHPV-TSGSERP------CGKTSWDARTPWAEGGP 261
+ P+A + R RP + P + PV TSG RP TS D+R G P
Sbjct: 415 KKGPQASSPRRKAERPEGTKKKPSSATPVATSGKGRPDRPARRPSPTSGDSRPAAGRGPP 474
Query: 262 LVLEAQNPRPTR 273
L+ + + T+
Sbjct: 475 RPLQLPDRKSTK 486
>gi|28557729 hypothetical protein LOC283687 [Homo sapiens]
Length = 130
Score = 39.3 bits (90), Expect = 0.004
Identities = 38/118 (32%), Positives = 43/118 (36%), Gaps = 21/118 (17%)
Query: 156 PGKELWSPIQQVTATSSKWAQFVLPPRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQ 215
P E WSPIQ + L P +S S QP + R P GP
Sbjct: 4 PASESWSPIQSRIPAYKAVSHLRLLPTANSPSGSNQPTNPNRAQHPEGP----------- 52
Query: 216 ASREGLSRPTAAVQLPRATHPVTSGSERPCGKTSWDARTPWAEGGPLVLEAQNPRPTR 273
SREG + P A P + S RP R P AE GP L RPTR
Sbjct: 53 QSREGATSPVLASLEPPTPTDLPSARARP--------RVP-AESGPGWLHKAR-RPTR 100
>gi|27262667 colony stimulating factor 1 isoform a precursor [Homo
sapiens]
Length = 554
Score = 38.1 bits (87), Expect = 0.009
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 19/98 (19%)
Query: 181 PRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASR-EGLSRPTAAVQLPRATHPVTS 239
P+K+ H P +L RDP + G+PR + R +GLS P+ P+ + +S
Sbjct: 384 PQKTDH-----PSALLRDP-------PEPGSPRISSLRPQGLSNPSTLSAQPQLSRSHSS 431
Query: 240 GSERPCG-----KTSWDARTP-WAEGGPLVLEAQNPRP 271
GS P G +++ D R+P EGGP A P P
Sbjct: 432 GSVLPLGELEGRRSTRDRRSPAEPEGGPASEGAARPLP 469
>gi|27262661 colony stimulating factor 1 isoform a precursor [Homo
sapiens]
Length = 554
Score = 38.1 bits (87), Expect = 0.009
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 19/98 (19%)
Query: 181 PRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASR-EGLSRPTAAVQLPRATHPVTS 239
P+K+ H P +L RDP + G+PR + R +GLS P+ P+ + +S
Sbjct: 384 PQKTDH-----PSALLRDP-------PEPGSPRISSLRPQGLSNPSTLSAQPQLSRSHSS 431
Query: 240 GSERPCG-----KTSWDARTP-WAEGGPLVLEAQNPRP 271
GS P G +++ D R+P EGGP A P P
Sbjct: 432 GSVLPLGELEGRRSTRDRRSPAEPEGGPASEGAARPLP 469
>gi|4557733 latent transforming growth factor beta binding protein 2
[Homo sapiens]
Length = 1821
Score = 37.4 bits (85), Expect = 0.015
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 164 IQQVTATSSKWAQFVLPPRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASREGLSR 223
+Q V W PR+ + ++ +P Q+ R PAQ ++ TP Q ++ R
Sbjct: 82 LQPVERAQPGWGS----PRRPTEAEARRPSRAQQSRRVQPPAQTRRSTPLGQ--QQPAPR 135
Query: 224 PTAAVQLPRATHPVTSGSERP 244
AA LPR P SG+ P
Sbjct: 136 TRAAPALPRLGTPQRSGAAPP 156
>gi|187960090 SMG5 homolog nonsense mediated mRNA decay factor [Homo
sapiens]
Length = 1016
Score = 37.4 bits (85), Expect = 0.015
Identities = 52/206 (25%), Positives = 78/206 (37%), Gaps = 40/206 (19%)
Query: 66 EGTGVCFSKQPSSKMEEPGPRFSQDLP------RKRKWSRSTV-----QPP-------CS 107
+GT SK+P K EEP P P + RK+SR + PP S
Sbjct: 416 DGTDEPESKEPVEKEEEPDPEPPPVTPQVGEGRKSRKFSRLSCLRRRRHPPKVGDDSDLS 475
Query: 108 RGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQV 167
G + + A + +G ++ G + E ++ ++ E R S ++ +
Sbjct: 476 EGFESDSSHDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESR-------SDLEDM 528
Query: 168 TATSSKWAQFVLPPRKSSHVDSEQPRSLQRDPRPAGPAQAK-------QGTPRAQASREG 220
+ + PPR SE P SL P GP++A T Q R
Sbjct: 529 EEEEGTRSPTLEPPRGR----SEAPDSLN---GPLGPSEASIASNLQAMSTQMFQTKRCF 581
Query: 221 LSRPT-AAVQLPRATHPVTSGSERPC 245
PT + + L T+P TS S RPC
Sbjct: 582 RLAPTFSNLLLQPTTNPHTSASHRPC 607
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 36.6 bits (83), Expect = 0.026
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 55/206 (26%)
Query: 11 RCCS---CRLFQAHQVKKSVKWTCKACGEKQSFLQEKSQPSESRWLKYLEKDSQELELEG 67
+CC C+ Q K ++ KA +K+ +KS+ SE +KDS+E +
Sbjct: 1187 QCCKMRKCQNLQWMPSKAYLQKQAKAVKKKE----KKSKTSE-------KKDSKESSVVK 1235
Query: 68 TGVCFSKQPS-SKMEEPGPRFSQDLPRKRKWSRSTVQPPCSRGVQDSG--GSEVAWGPQK 124
V S++P+ S E+P P+ +S+ +PP + V++ G+ A GP+
Sbjct: 1236 NVVDSSQKPTPSAREDPAPK------------KSSSEPPPRKPVEEKSEEGNVSAPGPES 1283
Query: 125 GQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLPPRKS 184
KQ ++P +++S S L P P T PPRK
Sbjct: 1284 ---------KQATTPASRKSSKQVSQPALVIP------PQPPTTG----------PPRKE 1318
Query: 185 -SHVDSEQPRSLQRDPRPAGPAQAKQ 209
+P+ Q P +GP Q+KQ
Sbjct: 1319 VPKTTPSEPKKKQPPPPESGPEQSKQ 1344
Score = 30.4 bits (67), Expect = 1.9
Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 15/140 (10%)
Query: 161 WSPIQQVTATSSKWAQFVLPP----------RKSSHVDSEQPRSLQR---DPRPAGPAQA 207
W P +V++ S VLPP + + +EQP +++ P+P GP +
Sbjct: 1777 WEP-NKVSSNSGMLPNAVLPPSLDHNYAQWQEREENSHTEQPPLMKKIIPAPKPKGPGEP 1835
Query: 208 KQGTPRAQASREGLSRPTAAVQLPRATHPVTSGSERPCGKTSWDARTPWAEGGPLVLEAQ 267
TP + LS + P P R C + G L+ Q
Sbjct: 1836 DSPTPLHPPTPPILSTDRSREDSPELNPPPGIEDNRQCALCLTYGDDSANDAGRLLYIGQ 1895
Query: 268 NPRPTRLCDLFITGEDFDDD 287
N C L+ + E F+DD
Sbjct: 1896 NEWTHVNCALW-SAEVFEDD 1914
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 36.6 bits (83), Expect = 0.026
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 181 PRKSSHVDSEQPRSLQRD----PRPA----GPAQAKQGTPRAQASREGLSRPTAAVQLPR 232
P +H+ SL+ D PRP+ G AQ P A + P + QLP
Sbjct: 6950 PASGTHLAPGHSHSLEHDSPSTPRPSSEACGEAQRLPSAPSGGAPIRDMGHPQGSKQLPS 7009
Query: 233 AT-HPVTSGSERPCGKTSWDARTPWA--EGGPLVLEAQNPRP 271
HP T+ ERP + W P+ + G E +P P
Sbjct: 7010 TGGHPGTAQPERPSPDSPWGQPAPFCHPKQGSAPQEGCSPHP 7051
>gi|62243586 ubiquitin-specific protease 21 [Homo sapiens]
Length = 565
Score = 35.4 bits (80), Expect = 0.058
Identities = 34/105 (32%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 179 LPPRKSSHVDSEQPRSLQRD----PRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRAT 234
LPPR + + L R PRP GP +A G P G PT A+ LP T
Sbjct: 52 LPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVP-----LPGSPPPTVALPLPSRT 106
Query: 235 H-----PVTSGSERPCGKTSWDARTPWAEGGPLVLEAQNPRPTRL 274
+ V+SG RP G R G L A P P L
Sbjct: 107 NLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL 151
>gi|74027267 ubiquitin-specific protease 21 [Homo sapiens]
Length = 565
Score = 35.4 bits (80), Expect = 0.058
Identities = 34/105 (32%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 179 LPPRKSSHVDSEQPRSLQRD----PRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRAT 234
LPPR + + L R PRP GP +A G P G PT A+ LP T
Sbjct: 52 LPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVP-----LPGSPPPTVALPLPSRT 106
Query: 235 H-----PVTSGSERPCGKTSWDARTPWAEGGPLVLEAQNPRPTRL 274
+ V+SG RP G R G L A P P L
Sbjct: 107 NLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL 151
>gi|38569493 potassium voltage-gated channel, subfamily H
(eag-related), member 3 [Homo sapiens]
Length = 1083
Score = 35.4 bits (80), Expect = 0.058
Identities = 38/135 (28%), Positives = 52/135 (38%), Gaps = 8/135 (5%)
Query: 141 LQENSADCSAGEL--RGPGKELWSPIQQVTATSSKWAQFVLPPRKSSHVDSEQPRSLQRD 198
L+E D G P E SP+ TSS A +L PR++ + +PR R
Sbjct: 728 LEEKETDGEQGPTVSPAPADEPSSPLLSPGCTSSSSAAKLLSPRRT----APRPRLGGRG 783
Query: 199 -PRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHP-VTSGSERPCGKTSWDARTPW 256
P AG +A+ G + EGL P +P P V G E CG
Sbjct: 784 RPGRAGALKAEAGPSAPPRALEGLRLPPMPWNVPPDLSPRVVDGIEDGCGSDQPKFSFRV 843
Query: 257 AEGGPLVLEAQNPRP 271
+ GP + +P P
Sbjct: 844 GQSGPECSSSPSPGP 858
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 35.0 bits (79), Expect = 0.076
Identities = 51/201 (25%), Positives = 71/201 (35%), Gaps = 24/201 (11%)
Query: 83 PGPRFSQDLPRK-RKWSRSTVQPPCSRGVQDSGGSEVAWGPQKGQAGLTWKVK------- 134
P P + Q P + W T +P RG G + V + G+ +V
Sbjct: 590 PSPGYPQGTPAAGQAW---TPEPSPRRG----GSNVVGYDRNNTGKGVEQEVPSTAPGLG 642
Query: 135 --QGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLPPRKSSHVDSEQP 192
QGS + + S G LR SP Q+ T+ S +Q R +SH +S Q
Sbjct: 643 MDQGSPSQVNPSQGSPSQGSLRQESTSQASPSQRSTSQGSP-SQVNPSQRSTSHANSSQG 701
Query: 193 RSLQRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSGSERPCGKTSWDA 252
Q P P+Q T +A S P+AT S P G T
Sbjct: 702 SPSQGSPSQESPSQG--STSQASPSHRNTIGVIGTTSSPKAT---GSTHSFPPGATDGPL 756
Query: 253 RTPWAEGGPLVLEAQN-PRPT 272
P G ++E + P PT
Sbjct: 757 ALPGQLQGNSIMEPPSWPSPT 777
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 34.3 bits (77), Expect = 0.13
Identities = 46/191 (24%), Positives = 63/191 (32%), Gaps = 43/191 (22%)
Query: 100 STVQPPCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKE 159
+T QPP + + +G P G + T + + P N P
Sbjct: 1200 TTPQPPTTPQLPTTGSRPTQVWPMTGTS-TTIGLLSSTGPSPSSNHT---------PASP 1249
Query: 160 LWSPIQQVTATSSKWAQFVLPPRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASRE 219
+P+ T TSSK P SS E PR P A QA G P R
Sbjct: 1250 TQTPLLPATLTSSK-------PTASS---GEPPR-----PTTAVTPQATSGLPPTATLRS 1294
Query: 220 GLSRPTAAVQLPRAT----HPVTSGSERPCGKTSWDARTPWAEG--------------GP 261
++PT RAT P T+ + + +T+ TP G G
Sbjct: 1295 TATKPTVTQATTRATASTASPATTSTAQSTTRTTMTLPTPATSGTSPTLPKSTNQELPGT 1354
Query: 262 LVLEAQNPRPT 272
+ PRPT
Sbjct: 1355 TATQTTGPRPT 1365
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 34.3 bits (77), Expect = 0.13
Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 15/153 (9%)
Query: 86 RFSQDLPRKRKWSRSTVQPPC--------SRGVQDSGGSEVAWGP------QKGQAGLTW 131
R S PR+R R PP +R DSG A GP ++G G
Sbjct: 397 RSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGK 456
Query: 132 KVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLPPRKSSHVDSEQ 191
+ K+ +++ R G E S + W+ P + S ++
Sbjct: 457 RAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKR 516
Query: 192 PRSLQRDPRPAGP-AQAKQGTPRAQASREGLSR 223
P S R P P P ++ K G RA+ S +R
Sbjct: 517 PHSPSRSPSPKKPLSRDKDGEGRARHSEAEATR 549
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 34.3 bits (77), Expect = 0.13
Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 12/173 (6%)
Query: 103 QPPCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWS 162
+PP + G E G A + + +E +A +A RGPG+ +
Sbjct: 1279 RPPWEGADAGAAGGEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAAGPRGPGRARAA 1338
Query: 163 PIQQVTATSSKWAQFVLPPRKSSHVDSEQPRSLQRDPRPA-----GPAQA---KQGTPR- 213
P+ V +++ A L S +++P + + + G Q TP
Sbjct: 1339 PVPVVVSSADADAARPLRGLLKSPRGADEPEDSELERKRKMVSFHGDVTVYLFDQETPTN 1398
Query: 214 ---AQASREGLSRPTAAVQLPRATHPVTSGSERPCGKTSWDARTPWAEGGPLV 263
QA EG + P+ P HP T G P + + WAE PL+
Sbjct: 1399 ELSVQAPPEGDTDPSTPPAPPTPPHPATPGDGFPSNDSGFGGSFEWAEDFPLL 1451
Score = 29.3 bits (64), Expect = 4.2
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 16/120 (13%)
Query: 101 TVQPPCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKEL 160
T++P R ++GG+ A P G+ L GS + G GPG +
Sbjct: 1112 TLEPGTERRAPETGGAPRA--PGAGRLDL------GSGGRAPVGTGTAPGG---GPGSGV 1160
Query: 161 WSPIQQVTATSSKWAQFVLPPRKSSHVDSEQPRSLQRDPRPAGPAQAKQGTPRAQASREG 220
+ V T + LPP + QPR L+ P A P A +G P A SR G
Sbjct: 1161 DAKAGWVDNTRPQPPPPPLPPPPEA-----QPRRLEPAPPRARPEVAPEGEPGAPDSRAG 1215
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 34.3 bits (77), Expect = 0.13
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 192 PRSLQRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPV-TSGSERPCGKTSW 250
P P P PA QG+ ++S GL+ A +L R P SG P G +
Sbjct: 196 PTGATPPPPPPLPAGGAQGSSHDESSMSGLAAAIAGAKLRRVQRPEDASGGSSPSGTSKS 255
Query: 251 DARTPWAEGG 260
DA + GG
Sbjct: 256 DANRASSGGG 265
>gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens]
Length = 1992
Score = 33.9 bits (76), Expect = 0.17
Identities = 43/154 (27%), Positives = 54/154 (35%), Gaps = 12/154 (7%)
Query: 100 STVQPPCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKE 159
ST+ S S S VA G +VKQG S S+ R +E
Sbjct: 191 STITDSSSAASTSSSSSAVASASSTVPPGA--RVKQGKDQNKARRSRSASSPSPRRSSRE 248
Query: 160 LWSPIQQVTATSSK--WAQFVLPPRKSSHVDSEQPRSLQRDPRPAGPA--QAKQGTPRAQ 215
Q T SSK WA P P S + + GP+ QAK + R
Sbjct: 249 ---KEQSKTGGSSKFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKS 305
Query: 216 ASREGLSRPTAAVQLPRATHPVTSGSERPCGKTS 249
+ S P L R+T T+GS C TS
Sbjct: 306 TKKRSESPPAELPSLRRSTRQKTTGS---CASTS 336
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 33.9 bits (76), Expect = 0.17
Identities = 50/197 (25%), Positives = 67/197 (34%), Gaps = 32/197 (16%)
Query: 67 GTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQPPCSRGVQDSGGSEVAWGPQKGQ 126
G C +S + P S+ PR + T+ P S G G+ P KG
Sbjct: 546 GAAPCPPNPANSWVPGLSPGGSRRPPRSPE---RTLSP--SSGYSSQSGTPTL--PPKGL 598
Query: 127 AGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWA----------- 175
AG +SP + LR PG + S + + ++SS A
Sbjct: 599 AG------PPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILT 652
Query: 176 ----QFVLPPRKSSHVDSEQPRSLQRDPRPAGPAQAKQGT---PRAQASREGLSRPTAAV 228
+FV+PP P S R P PA PA A P + S PT
Sbjct: 653 PLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQT 712
Query: 229 QL-PRATHPVTSGSERP 244
L P PV S + P
Sbjct: 713 TLTPLQESPVISKDQSP 729
>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
sapiens]
Length = 1570
Score = 33.5 bits (75), Expect = 0.22
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)
Query: 85 PRFSQDLPRKRKWSRSTVQPPCS------RGVQDSGGSEVAWGPQKGQAGLTWKVK--QG 136
PRFS+ + S+ + P + R G E G ++G GLT + K +G
Sbjct: 709 PRFSKVYSSMEQLSQHEPKTPVAAAGSSKREPSTKGPEEKVAGKREGLGGLTLREKTWRG 768
Query: 137 SSPCLQENSADCSAGELRGPGKELWSPIQQVTATSSKWAQFVLPPRKSSHVDSEQPRSLQ 196
SP ++ SA A L G E P+ +++ + P R S+ + E L+
Sbjct: 769 GSPEIKRFSAS-EASFLEG---EASPPL----GARRRFSALLEPSRFSAPQEDEDEARLR 820
Query: 197 RDPR----PAGPAQAKQGTPRAQASREGLS 222
R PR PAG A+ P+ + EG S
Sbjct: 821 RPPRPSSDPAGSLDAR--APKEETQGEGTS 848
>gi|22748699 hypothetical protein LOC121273 [Homo sapiens]
Length = 127
Score = 33.5 bits (75), Expect = 0.22
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 139 PCL-QENSADCSAGELRGPG-KELWSPIQ-QVTATSSKWAQFVLPPRKSSHVDSEQPRSL 195
PC QE + ++ + R +E P + QVT T + W Q + V + + L
Sbjct: 5 PCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLT-------VFKDIQKEL 57
Query: 196 QRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSGSERPCG 246
Q D R G + TP A R G RP ++ P+ S E+P G
Sbjct: 58 QEDARIRGMSNCSM-TPMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSG 107
>gi|189011568 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 32.7 bits (73), Expect = 0.38
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 139 PCLQENSADCSAGELRGPGKEL---WSPIQQVTATSSKWA-----QFVLPP--RKSSHV- 187
P ++ +S+ S +GP + SP + TAT+S + L P R++S +
Sbjct: 2234 PGVRNSSSSTSPVSKKGPPLKTPASKSPSEGQTATTSPRGAKPSVKSELSPVARQTSQIG 2293
Query: 188 -DSEQP-RSLQRDPRPAGPAQAKQGTP-------RAQASREGLSRPTAAVQLPRATHPVT 238
S+ P RS RD P+ PAQ P R G+S P QLPR + P T
Sbjct: 2294 GSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLSQLPRTSSPST 2353
Query: 239 SGSERP-CGKTSW 250
+ ++ GK S+
Sbjct: 2354 ASTKSSGSGKMSY 2366
>gi|189011566 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 32.7 bits (73), Expect = 0.38
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 139 PCLQENSADCSAGELRGPGKEL---WSPIQQVTATSSKWA-----QFVLPP--RKSSHV- 187
P ++ +S+ S +GP + SP + TAT+S + L P R++S +
Sbjct: 2234 PGVRNSSSSTSPVSKKGPPLKTPASKSPSEGQTATTSPRGAKPSVKSELSPVARQTSQIG 2293
Query: 188 -DSEQP-RSLQRDPRPAGPAQAKQGTP-------RAQASREGLSRPTAAVQLPRATHPVT 238
S+ P RS RD P+ PAQ P R G+S P QLPR + P T
Sbjct: 2294 GSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLSQLPRTSSPST 2353
Query: 239 SGSERP-CGKTSW 250
+ ++ GK S+
Sbjct: 2354 ASTKSSGSGKMSY 2366
>gi|53759122 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 32.7 bits (73), Expect = 0.38
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 139 PCLQENSADCSAGELRGPGKEL---WSPIQQVTATSSKWA-----QFVLPP--RKSSHV- 187
P ++ +S+ S +GP + SP + TAT+S + L P R++S +
Sbjct: 2234 PGVRNSSSSTSPVSKKGPPLKTPASKSPSEGQTATTSPRGAKPSVKSELSPVARQTSQIG 2293
Query: 188 -DSEQP-RSLQRDPRPAGPAQAKQGTP-------RAQASREGLSRPTAAVQLPRATHPVT 238
S+ P RS RD P+ PAQ P R G+S P QLPR + P T
Sbjct: 2294 GSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLSQLPRTSSPST 2353
Query: 239 SGSERP-CGKTSW 250
+ ++ GK S+
Sbjct: 2354 ASTKSSGSGKMSY 2366
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 45 SQPSESRWLKYLEKDSQELELEGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQP 104
S P RW + K ++ + + G+ + +PGP +Q P+ + + P
Sbjct: 313 SHPQAPRWPPHPGKSREDRDPQRDGL----PGPCAVAQPGP--AQAGPQ----GQGVLAP 362
Query: 105 PCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPI 164
P S+G G WG AG W+ + G++P Q D SA +G + + +P
Sbjct: 363 PTSQGSPWWG-----WGRGPQVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPS 417
Query: 165 Q 165
Q
Sbjct: 418 Q 418
>gi|44662836 breast cancer anti-estrogen resistance 1 [Homo sapiens]
Length = 870
Score = 32.7 bits (73), Expect = 0.38
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 80 MEEPGPRFSQDLPRKRKWSRSTVQPP--CSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGS 137
+ PGP D+PR+R V PP GV DSG V P + +A K S
Sbjct: 378 LRRPGPGTLYDVPRER------VLPPEVADGGVVDSGVYAVP-PPAEREAPAEGKRLSAS 430
Query: 138 SPCLQENSADCSAGELRGPGKE 159
S +S S+ E+ GPG+E
Sbjct: 431 STGSTRSSQSASSLEVAGPGRE 452
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 45 SQPSESRWLKYLEKDSQELELEGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQP 104
S P RW + K ++ + + G+ + +PGP +Q P+ + + P
Sbjct: 313 SHPQAPRWPPHPGKSREDRDPQRDGL----PGPCAVAQPGP--AQAGPQ----GQGVLAP 362
Query: 105 PCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPI 164
P S+G G WG AG W+ + G++P Q D SA +G + + +P
Sbjct: 363 PTSQGSPWWG-----WGRGPQVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPS 417
Query: 165 Q 165
Q
Sbjct: 418 Q 418
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 45 SQPSESRWLKYLEKDSQELELEGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQP 104
S P RW + K ++ + + G+ + +PGP +Q P+ + + P
Sbjct: 313 SHPQAPRWPPHPGKSREDRDPQRDGL----PGPCAVAQPGP--AQAGPQ----GQGVLAP 362
Query: 105 PCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPI 164
P S+G G WG AG W+ + G++P Q D SA +G + + +P
Sbjct: 363 PTSQGSPWWG-----WGRGPQVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPS 417
Query: 165 Q 165
Q
Sbjct: 418 Q 418
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 45 SQPSESRWLKYLEKDSQELELEGTGVCFSKQPSSKMEEPGPRFSQDLPRKRKWSRSTVQP 104
S P RW + K ++ + + G+ + +PGP +Q P+ + + P
Sbjct: 313 SHPQAPRWPPHPGKSREDRDPQRDGL----PGPCAVAQPGP--AQAGPQ----GQGVLAP 362
Query: 105 PCSRGVQDSGGSEVAWGPQKGQAGLTWKVKQGSSPCLQENSADCSAGELRGPGKELWSPI 164
P S+G G WG AG W+ + G++P Q D SA +G + + +P
Sbjct: 363 PTSQGSPWWG-----WGRGPQVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPS 417
Query: 165 Q 165
Q
Sbjct: 418 Q 418
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,309,943
Number of Sequences: 37866
Number of extensions: 778951
Number of successful extensions: 2746
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 2621
Number of HSP's gapped (non-prelim): 335
length of query: 288
length of database: 18,247,518
effective HSP length: 101
effective length of query: 187
effective length of database: 14,423,052
effective search space: 2697110724
effective search space used: 2697110724
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.