BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|62953123 hypothetical protein LOC267002 isoform b [Homo sapiens] (341 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|62953123 hypothetical protein LOC267002 isoform b [Homo sapiens] 714 0.0 gi|25777742 hypothetical protein LOC267002 isoform a [Homo sapiens] 714 0.0 gi|14210514 piggyBac transposable element derived 1 [Homo sapiens] 324 8e-89 gi|25777744 hypothetical protein LOC267004 [Homo sapiens] 306 1e-83 gi|25777746 piggyBac transposable element derived 4 [Homo sapiens] 53 4e-07 gi|25777748 piggyBac transposable element derived 5 [Homo sapiens] 38 0.015 gi|4503257 death-domain associated protein isoform a [Homo sapiens] 32 1.1 gi|215422388 death-domain associated protein isoform a [Homo sap... 32 1.1 gi|215422366 death-domain associated protein isoform b [Homo sap... 32 1.1 gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens] 30 2.4 gi|70610136 poly (ADP-ribose) glycohydrolase [Homo sapiens] 29 6.9 gi|12383066 axotrophin [Homo sapiens] 29 6.9 gi|126157508 N-acetylated alpha-linked acidic dipeptidase 2 [Hom... 28 9.1 gi|18105007 carbamoylphosphate synthetase 2/aspartate transcarba... 28 9.1 gi|89001096 zinc finger protein 550 [Homo sapiens] 28 9.1 >gi|62953123 hypothetical protein LOC267002 isoform b [Homo sapiens] Length = 341 Score = 714 bits (1842), Expect = 0.0 Identities = 341/341 (100%), Positives = 341/341 (100%) Query: 1 MNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEP 60 MNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEP Sbjct: 1 MNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEP 60 Query: 61 SQGTLFTKPDRSLDLGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVKAT 120 SQGTLFTKPDRSLDLGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVKAT Sbjct: 61 SQGTLFTKPDRSLDLGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVKAT 120 Query: 121 GTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPV 180 GTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPV Sbjct: 121 GTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPV 180 Query: 181 RLTSRHSGAAKTRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGYVI 240 RLTSRHSGAAKTRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGYVI Sbjct: 181 RLTSRHSGAAKTRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGYVI 240 Query: 241 DAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRRSRRLETESRFDMIG 300 DAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRRSRRLETESRFDMIG Sbjct: 241 DAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRRSRRLETESRFDMIG 300 Query: 301 HWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYHIR 341 HWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYHIR Sbjct: 301 HWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYHIR 341 >gi|25777742 hypothetical protein LOC267002 isoform a [Homo sapiens] Length = 592 Score = 714 bits (1842), Expect = 0.0 Identities = 341/341 (100%), Positives = 341/341 (100%) Query: 1 MNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEP 60 MNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEP Sbjct: 252 MNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEP 311 Query: 61 SQGTLFTKPDRSLDLGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVKAT 120 SQGTLFTKPDRSLDLGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVKAT Sbjct: 312 SQGTLFTKPDRSLDLGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVKAT 371 Query: 121 GTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPV 180 GTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPV Sbjct: 372 GTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPV 431 Query: 181 RLTSRHSGAAKTRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGYVI 240 RLTSRHSGAAKTRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGYVI Sbjct: 432 RLTSRHSGAAKTRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGYVI 491 Query: 241 DAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRRSRRLETESRFDMIG 300 DAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRRSRRLETESRFDMIG Sbjct: 492 DAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRRSRRLETESRFDMIG 551 Query: 301 HWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYHIR 341 HWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYHIR Sbjct: 552 HWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYHIR 592 >gi|14210514 piggyBac transposable element derived 1 [Homo sapiens] Length = 809 Score = 324 bits (830), Expect = 8e-89 Identities = 156/280 (55%), Positives = 201/280 (71%), Gaps = 5/280 (1%) Query: 1 MNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEP 60 MN NF +APLEE+Y F +SMCE F S Q GKP+R+GYKIWCGTT++GYLVWFEP Sbjct: 529 MNKNFLLYAPLEEYYCFDKSMCECFD---SDQFLNGKPIRIGYKIWCGTTTQGYLVWFEP 585 Query: 61 SQ--GTLFTKPDRSLDLGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVK 118 Q T+ D L LGG++V+ F D L ERG PYH+ FD FTSVKL+S L+KKGV+ Sbjct: 586 YQEESTMKVDEDPDLGLGGNLVMNFADVLLERGQYPYHLCFDSFFTSVKLLSALKKKGVR 645 Query: 119 ATGTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIE 178 ATGT+RE RTE+CPL + + +KKMKRG FD++++E+ EII+CRW+ ++++CSNAVGIE Sbjct: 646 ATGTIRENRTEKCPLMNVEHMKKMKRGYFDFRIEENNEIILCRWYGDGIISLCSNAVGIE 705 Query: 179 PVRLTSRHSGAAKTRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGY 238 PV S + Q+ QPS+VK+Y E GV +MDQ I+KY+V+IR KWYS + Y Sbjct: 706 PVNEVSCCDADNEEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRIRSKKWYSILVSY 765 Query: 239 VIDAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNA 278 +ID A+NNAWQLHR C A +D L FRR++A YLE NA Sbjct: 766 MIDVAMNNAWQLHRACNPGASLDPLDFRRFVAHFYLEHNA 805 >gi|25777744 hypothetical protein LOC267004 [Homo sapiens] Length = 593 Score = 306 bits (785), Expect = 1e-83 Identities = 152/341 (44%), Positives = 207/341 (60%), Gaps = 4/341 (1%) Query: 1 MNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEP 60 +N K P E ++SF E M YFG G KQ RGKP+R GYK WCG T GY+ WF+P Sbjct: 253 LNERCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFGYKFWCGATCLGYICWFQP 312 Query: 61 SQGTLFTKPDRSLDLGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVKAT 120 QG +G S+V++F +AL E YH F+ FTS+ L+ L G +AT Sbjct: 313 YQGKNPNTKHEEYGVGASLVLQFSEALTEAHPGQYHFVFNNFFTSIALLDKLSSMGHQAT 372 Query: 121 GTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPV 180 GTVR+ ++ PL+ LKK +RG+FDY++D + IVCRW+D+SVV + S+ GI P+ Sbjct: 373 GTVRKDHIDKVPLESDVALKKKERGTFDYRID-GKGNIVCRWNDNSVVTVASSGAGIHPL 431 Query: 181 RLTSRHSGAAKTRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGYVI 240 L SR+S K + QV QP+++K+Y + +GGV R D+NI KY+ IRG KWYSS + + Sbjct: 432 CLVSRYSQKLKKKIQVQQPNMIKVYNQFMGGVDRADENIDKYRASIRGKKWYSSPLLFCF 491 Query: 241 DAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRRSR--RLETESRFDM 298 + L NAWQLH+ + VD L FRR + C YLE++ G++ R + +SR+D Sbjct: 492 ELVLQNAWQLHK-TYDEKPVDFLEFRRRVVCHYLETHGHPPEPGQKGRPQKRNIDSRYDG 550 Query: 299 IGHWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYH 339 I H I+ Q K+TRCA CH T RCEKC +H KC EYH Sbjct: 551 INHVIVKQGKQTRCAECHKNTTFRCEKCDVALHVKCSVEYH 591 >gi|25777746 piggyBac transposable element derived 4 [Homo sapiens] Length = 585 Score = 52.8 bits (125), Expect = 4e-07 Identities = 76/333 (22%), Positives = 127/333 (38%), Gaps = 37/333 (11%) Query: 19 ESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRGYLVWFEPSQGTLFTKPDRSLD---- 74 ES+ + G KQ K VR G K++ S+ VW + T P +L Sbjct: 251 ESLMLFKGPLAMKQYLPTKRVRFGLKLYVLCESQSGYVW----NALVHTGPGMNLKDSAD 306 Query: 75 --LGGSMVIKFVDALQERGFLPYHIFFDKVFTSVKLMSILRKKGVKATGTVREYRTERCP 132 +V+ V+ L +G Y +F D S L L + A GT R R + Sbjct: 307 GLKSSRIVLTLVNDLLGQG---YCVFLDNFNISPMLFRELHQNRTDAVGTARLNRKQ--- 360 Query: 133 LKDPKELKK-MKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPVRLTSRHSGAAK 191 P +LKK + +G+ + E++ +W D V + S + + +R+ K Sbjct: 361 --IPNDLKKRIAKGTTVARF--CGELMALKWCDGKEVTMLSTFHNDTVIEVNNRNGKKTK 416 Query: 192 TRTQVHQPSLVKLYQEKVGGVGRMDQNIAKYKVKIRGMK-WYSSFIGYVIDAALNNAWQL 250 +P ++ Y E +G V DQ + Y + + K WY F +++ + N++ L Sbjct: 417 ------RPRVIVDYNENMGAVDSADQMLTSYPSERKRHKVWYKKFFHHLLHITVLNSYIL 470 Query: 251 HRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRRSR---------RLETESRFDMIGH 301 + + + + FR + LE + Q R R RL I Sbjct: 471 FKKDNPEHTMSHINFRLALIERMLEKHHKPGQQHLRGRPCSDDVTPLRLSGRHFPKSIPA 530 Query: 302 WIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKC 334 Q+ RC +C SQ + +K +K C Sbjct: 531 TSGKQNPTGRCKICCSQYDKDGKKIRKETRYFC 563 >gi|25777748 piggyBac transposable element derived 5 [Homo sapiens] Length = 554 Score = 37.7 bits (86), Expect = 0.015 Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 12/163 (7%) Query: 95 YHIFFDKVFTSVKLMSILRKKGVKATGTVREYRTE--RCPLKD-PKELKKMKRGSFDYKV 151 Y IF TS+ L K+G+ G +R +++ PL RG + K+ Sbjct: 368 YIIFTGPSITSLTLFEEFEKQGIYCCGLLRARKSDCTGLPLSMLTNPATPPARGQYQIKM 427 Query: 152 DESEEIIVCRWHDSSVVNICSNAVG-IEPVRLTSRHSGAAKTRTQVHQPSLVKLYQEKVG 210 + +I W++ +NA ++ + R SG ++ P V+ + + Sbjct: 428 KGNMSLIC--WYNKGHFRFLTNAYSPVQQGVIIKRKSG------EIPCPLAVEAFAAHLS 479 Query: 211 GVGRMDQNIAKYKVKIRGMKWYSSFIGYVIDAALNNAWQLHRI 253 + R D +KY + + K + + I A+NNA+ L+++ Sbjct: 480 YICRYDDKYSKYFISHKPNKTWQQVFWFAISIAINNAYILYKM 522 >gi|4503257 death-domain associated protein isoform a [Homo sapiens] Length = 740 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Query: 125 EYRTERCPLKDPKELKKMKRGSFD-YKVDESEEIIVCRWHDSSVVNIC--SNAVGIEPVR 181 E E ++ ++L++M+ G D + DE EE + D S ++ SN +EP + Sbjct: 453 EEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGK 512 Query: 182 LTSRHSGAAKTRTQVHQPSLV 202 SR SG + + ++ PSL+ Sbjct: 513 QISRSSGEQQNKGRIVSPSLL 533 >gi|215422388 death-domain associated protein isoform a [Homo sapiens] Length = 740 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Query: 125 EYRTERCPLKDPKELKKMKRGSFD-YKVDESEEIIVCRWHDSSVVNIC--SNAVGIEPVR 181 E E ++ ++L++M+ G D + DE EE + D S ++ SN +EP + Sbjct: 453 EEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGK 512 Query: 182 LTSRHSGAAKTRTQVHQPSLV 202 SR SG + + ++ PSL+ Sbjct: 513 QISRSSGEQQNKGRIVSPSLL 533 >gi|215422366 death-domain associated protein isoform b [Homo sapiens] Length = 752 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Query: 125 EYRTERCPLKDPKELKKMKRGSFD-YKVDESEEIIVCRWHDSSVVNIC--SNAVGIEPVR 181 E E ++ ++L++M+ G D + DE EE + D S ++ SN +EP + Sbjct: 465 EEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGK 524 Query: 182 LTSRHSGAAKTRTQVHQPSLV 202 SR SG + + ++ PSL+ Sbjct: 525 QISRSSGEQQNKGRIVSPSLL 545 >gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens] Length = 440 Score = 30.4 bits (67), Expect = 2.4 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 308 KRTRCALCHSQTNTRCEKCQKGVHAKCFREYHIR 341 +R RCA C ++ + RC +CQ + C RE ++ Sbjct: 390 ERPRCAYCSAEASKRCSRCQNEWY--CCRECQVK 421 >gi|70610136 poly (ADP-ribose) glycohydrolase [Homo sapiens] Length = 976 Score = 28.9 bits (63), Expect = 6.9 Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 15/148 (10%) Query: 134 KDPKELKKMKRGSF-DYKVDESEEIIVCRWHDSSVVNICSNAVGIEPVRLTSRHSGAAKT 192 K P L R S D+ E E + R H + I N G+ V +R G T Sbjct: 689 KKPTGLVTFTRQSLEDFPEWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANRFVGGGVT 748 Query: 193 RTQVHQPSLVKLYQEKVGGVGRMDQNIAKYK--VKIRGMKWYSSFIGYVI---------D 241 + Q + L ++ + R+ + + + I G + YS + GY D Sbjct: 749 SAGLVQEEIRFLINPELI-ISRLFTEVLDHNECLIITGTEQYSEYTGYAETYRWSRSHED 807 Query: 242 AALNNAWQLHRICCQDAQVDLLAFRRYI 269 + + WQ R C + +D L FRRY+ Sbjct: 808 GSERDDWQ--RRCTEIVAIDALHFRRYL 833 >gi|12383066 axotrophin [Homo sapiens] Length = 704 Score = 28.9 bits (63), Expect = 6.9 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 10/83 (12%) Query: 127 RTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPVRLTSRH 186 +T+ P +DP+ L+K+K S + E EE +CR + + S+ + IEP + T Sbjct: 520 KTKSAPSRDPERLQKIKE-SLLLEDSEEEEGDLCRICQMAAAS--SSNLLIEPCKCTG-- 574 Query: 187 SGAAKTRTQVHQPSLVKLYQEKV 209 + VHQ + K Q K+ Sbjct: 575 -----SLQYVHQDCMKKWLQAKI 592 >gi|126157508 N-acetylated alpha-linked acidic dipeptidase 2 [Homo sapiens] Length = 795 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 274 LESNADTTSQGRRSRRLETESRFDMIGHWIIHQDKRTRCALCH 316 L+S TS R +RL+ ES D I H+ K RC CH Sbjct: 84 LDSIQPATSPKGRFQRLQEES--DYITHYTRSAPKSNRCNFCH 124 >gi|18105007 carbamoylphosphate synthetase 2/aspartate transcarbamylase/dihydroorotase [Homo sapiens] Length = 2225 Score = 28.5 bits (62), Expect = 9.1 Identities = 10/32 (31%), Positives = 20/32 (62%) Query: 145 GSFDYKVDESEEIIVCRWHDSSVVNICSNAVG 176 G++ DE +E +C+W +SS +++ + VG Sbjct: 58 GNYGIPPDEMDEFGLCKWFESSGIHVAALVVG 89 >gi|89001096 zinc finger protein 550 [Homo sapiens] Length = 381 Score = 28.5 bits (62), Expect = 9.1 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 268 YIACVYLESNADTTSQGRRSRRLETESRFDMIGHWIIHQDKRTRCALCHSQTNT-RCEKC 326 ++ V LE T G SR L+ D++ Q + AL H+ TN +C++C Sbjct: 110 HLGKVSLEGEGLGTDDGLHSRALQEWLSADVLHECDSQQPGKD--ALIHAGTNPYKCKQC 167 Query: 327 QKGVHAKCFREYHIR 341 KG + K + H R Sbjct: 168 GKGFNRKWYLVRHQR 182 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.137 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,854,938 Number of Sequences: 37866 Number of extensions: 546945 Number of successful extensions: 1582 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 1566 Number of HSP's gapped (non-prelim): 15 length of query: 341 length of database: 18,247,518 effective HSP length: 103 effective length of query: 238 effective length of database: 14,347,320 effective search space: 3414662160 effective search space used: 3414662160 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.