Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CUTA Sequence: fasta or formatted (179aa) NCBI GI: 62526026
Description:

cutA divalent cation tolerance homolog isoform 3

Referenced in:

Acetylcholine
Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt prot [198aa] cutA divalent cation tolerance homolog isoform 1
alt prot [156aa] cutA divalent cation tolerance homolog isoform 2
alt prot [156aa] cutA divalent cation tolerance homolog isoform 2
alt prot [156aa] cutA divalent cation tolerance homolog isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         17           2
 C cysteine            1.1          2           1
 D aspartate           2.2          4           1
 E glutamate           6.1         11           2
 F phenylalanine       2.2          4           1
 G glycine             5.6         10           2
 H histidine           0.6          1           1
 I isoleucine          4.5          8           1
 K lysine              3.4          6           1
 L leucine            11.7         21           4
 M methionine          2.8          5           2
 N asparagine          1.7          3           1
 P proline             8.9         16           2
 Q glutamine           3.4          6           1
 R arginine            3.9          7           1
 S serine             11.2         20           2
 T threonine           4.5          8           1
 V valine             12.8         23           2
 W tryptophan          1.7          3           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cutA divalent cation tolerance homolog isoform 3 [Ho... 
CUTA                  0.920   cutA divalent cation tolerance homolog isoform 1 [Ho...
CUTA                  0.864   cutA divalent cation tolerance homolog isoform 2 [Ho...
CUTA                  0.864   cutA divalent cation tolerance homolog isoform 2 [Hom...
CUTA                  0.864   cutA divalent cation tolerance homolog isoform 2 [Ho...
TRIM24                0.015   transcriptional intermediary factor 1 alpha isoform ...
TRIM24                0.015   transcriptional intermediary factor 1 alpha isoform ...
KIF13B                0.012   kinesin family member 13B 
LOC100291753          0.012   PREDICTED: hypothetical protein XP_002344747 
LOC100287344          0.012   PREDICTED: hypothetical protein 
LOC100287344          0.012   PREDICTED: hypothetical protein XP_002343247 
MIP                   0.012   major intrinsic protein of lens fiber 
CHD3                  0.012   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.012   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.012   chromodomain helicase DNA binding protein 3 isoform...
LOC100291973          0.009   PREDICTED: hypothetical protein XP_002345198 
LOC100287160          0.009   PREDICTED: hypothetical protein 
LOC100289755          0.009   PREDICTED: hypothetical protein XP_002347888 
LOC100287160          0.009   PREDICTED: hypothetical protein XP_002343676 
LOC100287497          0.009   PREDICTED: hypothetical protein XP_002342228 
SETX                  0.009   senataxin 
SH3RF3                0.009   SH3 domain containing ring finger 3 
MKI67                 0.009   antigen identified by monoclonal antibody Ki-67 iso...
MKI67                 0.009   antigen identified by monoclonal antibody Ki-67 iso...
NGLY1                 0.009   N-glycanase 1 isoform 4 
CDKN1C                0.009   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.009   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.009   cyclin-dependent kinase inhibitor 1C isoform a 
TOX3                  0.009   TOX high mobility group box family member 3 isoform...
TOX3                  0.009   TOX high mobility group box family member 3 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press