Search of human proteins with 62198241

Search of human proteins with 62198241

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|62198241 cutA divalent cation tolerance homolog isoform 1
[Homo sapiens]
         (198 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|62198241 cutA divalent cation tolerance homolog isoform 1 [Ho...   390   e-109
gi|62526026 cutA divalent cation tolerance homolog isoform 3 [Ho...   323   8e-89
gi|62526024 cutA divalent cation tolerance homolog isoform 2 [Ho...   305   1e-83
gi|7706244 cutA divalent cation tolerance homolog isoform 2 [Hom...   305   1e-83
gi|62526022 cutA divalent cation tolerance homolog isoform 2 [Ho...   305   1e-83
gi|239747606 PREDICTED: hypothetical protein XP_002347888 [Homo ...    33   0.12 
gi|239741478 PREDICTED: hypothetical protein XP_002342228 [Homo ...    33   0.12 
gi|47419911 transcriptional intermediary factor 1 alpha isoform ...    32   0.35 
gi|47419909 transcriptional intermediary factor 1 alpha isoform ...    32   0.35 
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]           32   0.46 
gi|239752651 PREDICTED: similar to hCG2042721 [Homo sapiens]           31   0.60 
gi|239740993 PREDICTED: hypothetical protein XP_002342057 [Homo ...    31   0.60 
gi|187608767 E74-like factor 4 [Homo sapiens]                          30   1.3  
gi|4503555 E74-like factor 4 [Homo sapiens]                            30   1.3  
gi|4885127 caudal type homeobox 4 [Homo sapiens]                       30   1.3  
gi|169211520 PREDICTED: hypothetical protein [Homo sapiens]            29   2.3  
gi|239755930 PREDICTED: hypothetical protein XP_002344747 [Homo ...    29   3.0  
gi|239750450 PREDICTED: hypothetical protein [Homo sapiens]            29   3.0  
gi|239744752 PREDICTED: hypothetical protein XP_002343247 [Homo ...    29   3.0  
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ...    29   3.0  
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ...    29   3.0  
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...    29   3.0  
gi|113722133 senataxin [Homo sapiens]                                  28   3.9  
gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]        28   3.9  
gi|4503925 GATA binding protein 1 [Homo sapiens]                       28   5.1  
gi|46852172 kinesin family member 13B [Homo sapiens]                   28   5.1  
gi|225543215 antigen identified by monoclonal antibody Ki-67 iso...    28   6.7  
gi|103472005 antigen identified by monoclonal antibody Ki-67 iso...    28   6.7  
gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens]                    28   6.7  
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    28   6.7  

>gi|62198241 cutA divalent cation tolerance homolog isoform 1 [Homo
           sapiens]
          Length = 198

 Score =  390 bits (1001), Expect = e-109
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MIGSGLAGSGGAGGPSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVL 60
           MIGSGLAGSGGAGGPSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVL
Sbjct: 1   MIGSGLAGSGGAGGPSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVL 60

Query: 61  LTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIP 120
           LTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIP
Sbjct: 61  LTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIP 120

Query: 121 QITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNFPYL 180
           QITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNFPYL
Sbjct: 121 QITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNFPYL 180

Query: 181 QWVRQVTESVSDSITVLP 198
           QWVRQVTESVSDSITVLP
Sbjct: 181 QWVRQVTESVSDSITVLP 198


>gi|62526026 cutA divalent cation tolerance homolog isoform 3 [Homo
           sapiens]
          Length = 179

 Score =  323 bits (827), Expect = 8e-89
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 34  ASLLLSFVWMPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVT 93
           ASLLLSFVWMPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVT
Sbjct: 15  ASLLLSFVWMPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVT 74

Query: 94  CPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALT 153
           CPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALT
Sbjct: 75  CPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALT 134

Query: 154 DFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 198
           DFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 135 DFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 179


>gi|62526024 cutA divalent cation tolerance homolog isoform 2 [Homo
           sapiens]
          Length = 156

 Score =  305 bits (782), Expect = 1e-83
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 43  MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 102
           MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60

Query: 103 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 162
           IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120

Query: 163 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 198
           EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156


>gi|7706244 cutA divalent cation tolerance homolog isoform 2 [Homo
           sapiens]
          Length = 156

 Score =  305 bits (782), Expect = 1e-83
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 43  MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 102
           MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60

Query: 103 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 162
           IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120

Query: 163 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 198
           EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156


>gi|62526022 cutA divalent cation tolerance homolog isoform 2 [Homo
           sapiens]
          Length = 156

 Score =  305 bits (782), Expect = 1e-83
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 43  MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 102
           MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE
Sbjct: 1   MPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKE 60

Query: 103 IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 162
           IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY
Sbjct: 61  IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPY 120

Query: 163 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 198
           EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP
Sbjct: 121 EVAEVIALPVEQGNFPYLQWVRQVTESVSDSITVLP 156


>gi|239747606 PREDICTED: hypothetical protein XP_002347888 [Homo
           sapiens]
          Length = 168

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 15  PSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVLL-TMASGSPPTQPS 73
           P +   +  +FS  V      L++SF ++  +  + + L++LPRV+L  +AS  PPT  S
Sbjct: 88  PRTVPIYTCIFSQSVGCLFILLIISFNFLLFIYFIETDLIMLPRVILDLLASSDPPTLVS 147

Query: 74  PAS 76
            ++
Sbjct: 148 QSA 150


>gi|239741478 PREDICTED: hypothetical protein XP_002342228 [Homo
           sapiens]
          Length = 168

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 15  PSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVLL-TMASGSPPTQPS 73
           P +   +  +FS  V      L++SF ++  +  + + L++LPRV+L  +AS  PPT  S
Sbjct: 88  PRTVPIYTCIFSQSVGCLFILLIISFNFLLFIYFIETDLIMLPRVILDLLASSDPPTLVS 147

Query: 74  PAS 76
            ++
Sbjct: 148 QSA 150


>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
           [Homo sapiens]
          Length = 1050

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 10  GGAGGPSSTVTWCALFSNHVAATQASLLLSF-VWMPALLPVASRLLLLPRVLLTMASGSP 68
           GG     + +  CA+   ++ +    LL     +    LP   R L+LP  +L  A  +P
Sbjct: 44  GGEAARLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAE-TP 102

Query: 69  PTQPSPASDSGSGYVPGSVSAAFVTCP 95
           P  P+P S   SG  P +     + CP
Sbjct: 103 PPVPAPGSPV-SGSSPFATQVGVIRCP 128


>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
           [Homo sapiens]
          Length = 1016

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 10  GGAGGPSSTVTWCALFSNHVAATQASLLLSF-VWMPALLPVASRLLLLPRVLLTMASGSP 68
           GG     + +  CA+   ++ +    LL     +    LP   R L+LP  +L  A  +P
Sbjct: 44  GGEAARLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAE-TP 102

Query: 69  PTQPSPASDSGSGYVPGSVSAAFVTCP 95
           P  P+P S   SG  P +     + CP
Sbjct: 103 PPVPAPGSPV-SGSSPFATQVGVIRCP 128


>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
          Length = 645

 Score = 31.6 bits (70), Expect = 0.46
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 16/79 (20%)

Query: 33  QASLLLSFVWMPALLPVASRLLLLPRVLLTMASGS-PPTQPSPASDSGSGYVPGSVSAAF 91
           Q+S  L+  W+P LLP+         +L T++  S   TQPS  S S     PG    A 
Sbjct: 463 QSSECLTMAWIPLLLPLL--------ILCTVSVASYELTQPSSVSVS-----PG--QTAR 507

Query: 92  VTCPNEKVAKEIARAVVEK 110
           +TC  + +AK+ AR   +K
Sbjct: 508 ITCSGDVLAKKYARWFQQK 526


>gi|239752651 PREDICTED: similar to hCG2042721 [Homo sapiens]
          Length = 168

 Score = 31.2 bits (69), Expect = 0.60
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 15  PSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVLLTM-ASGSPPTQPS 73
           P +   +  +FS  V      L++S  ++  +  + + L++LPRV+L + AS  PPT  S
Sbjct: 88  PRTVPIYTCIFSQSVGCLFILLIISLNFLLFIYFIETDLIMLPRVILDLPASSDPPTLVS 147

Query: 74  PAS 76
            ++
Sbjct: 148 QSA 150


>gi|239740993 PREDICTED: hypothetical protein XP_002342057 [Homo
           sapiens]
          Length = 168

 Score = 31.2 bits (69), Expect = 0.60
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 15  PSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVLL-TMASGSPPTQPS 73
           P +   +  +FS  V      L++S  ++  +  + + L++LPRV+L  +AS  PPT  S
Sbjct: 88  PRTVPIYTCIFSQSVGCLFILLIISLNFLLFIYFIETDLIMLPRVILDLLASSDPPTLVS 147

Query: 74  PAS 76
            ++
Sbjct: 148 QSA 150


>gi|187608767 E74-like factor 4 [Homo sapiens]
          Length = 663

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 15/106 (14%)

Query: 13  GGPSSTVTWCALFSNHVAAT---------QASLLLSFVWMPALLPVASRLLLLPRVLLTM 63
           G P+ST     L    V A          QAS  L+  +  + +      L+L  +   +
Sbjct: 431 GPPASTTAPTQLVLQSVPAASTFKDTFTLQASFPLNASFQDSQVAAPGAPLILSGLPQLL 490

Query: 64  ASGSPPTQPSPASDSGSG------YVPGSVSAAFVTCPNEKVAKEI 103
           A  + PT P+P + +G+G        PG+V AAF+       A  +
Sbjct: 491 AGANRPTNPAPPTVTGAGPAGPSSQPPGTVIAAFIRTSGTTAAPRV 536


>gi|4503555 E74-like factor 4 [Homo sapiens]
          Length = 663

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 15/106 (14%)

Query: 13  GGPSSTVTWCALFSNHVAAT---------QASLLLSFVWMPALLPVASRLLLLPRVLLTM 63
           G P+ST     L    V A          QAS  L+  +  + +      L+L  +   +
Sbjct: 431 GPPASTTAPTQLVLQSVPAASTFKDTFTLQASFPLNASFQDSQVAAPGAPLILSGLPQLL 490

Query: 64  ASGSPPTQPSPASDSGSG------YVPGSVSAAFVTCPNEKVAKEI 103
           A  + PT P+P + +G+G        PG+V AAF+       A  +
Sbjct: 491 AGANRPTNPAPPTVTGAGPAGPSSQPPGTVIAAFIRTSGTTAAPRV 536


>gi|4885127 caudal type homeobox 4 [Homo sapiens]
          Length = 284

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 15/100 (15%)

Query: 3   GSGLAGSGGAGGPSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVLLT 62
           G G AG+GG GG  S +      SN  AA   S  + +  MP++ P        P + + 
Sbjct: 23  GDGTAGTGGTGGGGSPMP----ASNFAAAPAFSHYMGYPHMPSMDP------HWPSLGVW 72

Query: 63  MASGSPPTQ-----PSPASDSGSGYVPGSVSAAFVTCPNE 97
            +  SPP +     P P+S  G+  V    S+    C  +
Sbjct: 73  GSPYSPPREDWSVYPGPSSTMGTVPVNDVTSSPAAFCSTD 112


>gi|169211520 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 312

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 20/91 (21%)

Query: 4   SGLAGSGGAGGPSSTVTWCALFSNHVAATQASLLLS----FVWMPALLPVASRLLLLPRV 59
           SG    GG+ GP+ T     L +  +     SL L      VW P   PV   L  LP V
Sbjct: 155 SGPGRGGGSCGPAGTAAGGKLRARLLRLPDCSLALGKASYSVWSPTHFPVPPLLGRLPCV 214

Query: 60  LL-----------TMASGS-----PPTQPSP 74
           LL           T A+G+     P   PSP
Sbjct: 215 LLEGPARCQRRVETFAAGAGLFVGPGASPSP 245


>gi|239755930 PREDICTED: hypothetical protein XP_002344747 [Homo
           sapiens]
          Length = 64

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 60  LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 101
           L TM+S   P  PSP     S ++PG  +A +   P   +A+
Sbjct: 12  LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53


>gi|239750450 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 64

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 60  LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 101
           L TM+S   P  PSP     S ++PG  +A +   P   +A+
Sbjct: 12  LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53


>gi|239744752 PREDICTED: hypothetical protein XP_002343247 [Homo
           sapiens]
          Length = 64

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 60  LLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAK 101
           L TM+S   P  PSP     S ++PG  +A +   P   +A+
Sbjct: 12  LYTMSSEVLPQPPSPTITIFSSFLPGPGAAVWARAPGASIAR 53


>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
            [Homo sapiens]
          Length = 2000

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 43   MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 95
            +PA L    P+A+RL +  R +L+ +AS      P+PA   G    P    AAF   P
Sbjct: 1882 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1939


>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
            [Homo sapiens]
          Length = 1966

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 43   MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 95
            +PA L    P+A+RL +  R +L+ +AS      P+PA   G    P    AAF   P
Sbjct: 1848 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1905


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
            [Homo sapiens]
          Length = 2059

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 43   MPALL----PVASRLLLLPRVLLT-MASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 95
            +PA L    P+A+RL +  R +L+ +AS      P+PA   G    P    AAF   P
Sbjct: 1941 LPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP 1998


>gi|113722133 senataxin [Homo sapiens]
          Length = 2677

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 46   LLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCPNEKVAKEIAR 105
            L PV  R L  P  +     GS P    P+S   SG+   SV+A+    P++  +KEI  
Sbjct: 2465 LKPVLQRSLTHPPTIAP--EGSRPQGGLPSSKLDSGFAKTSVAASLYHTPSD--SKEITL 2520

Query: 106  AVVEK 110
             V  K
Sbjct: 2521 TVTSK 2525


>gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]
          Length = 882

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 62  TMASGSPPTQPSPASDS------GSGYVPGSV--SAAFVTCPNEKVAKEIARAVVEKRLA 113
           T   GSPP +P P   +      G G   GS   S  F++      A  +      +   
Sbjct: 129 TSPGGSPPARPIPGQSAAPTLAGGGGGAAGSTPGSPVFLSAAAGSTAGSLRELATSRTAP 188

Query: 114 ACVN--LIPQITSIYEWKGK 131
           A  N  L+P   ++Y ++GK
Sbjct: 189 AAKNPCLLPYGKALYSYEGK 208


>gi|4503925 GATA binding protein 1 [Homo sapiens]
          Length = 413

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 1   MIGSGLAGSGGAGGPSSTVTWCALFSNHVAATQASLLLSFVWMPALLPVASRLLLLPRVL 60
           M+ +G +GSG  G  +S +T     + H+      ++LS        PV S L+  P  L
Sbjct: 335 MVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLSG-------PV-SHLMPFPGPL 386

Query: 61  LTMASGSPPTQPSPASDSGSGYVP 84
           L   +GS PT P P + S +   P
Sbjct: 387 LGSPTGSFPTGPMPPTTSTTVVAP 410


>gi|46852172 kinesin family member 13B [Homo sapiens]
          Length = 1826

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 57   PRVLLTMASGSPPTQ---PSPASDSGSGYVPGSVSAA 90
            P + +T  + +P  Q   PSP S++ SGY   SVS A
Sbjct: 1540 PVIAVTAVTPAPEAQDGPPSPLSEASSGYFSHSVSTA 1576


>gi|225543215 antigen identified by monoclonal antibody Ki-67
           isoform 2 [Homo sapiens]
          Length = 2896

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 93  TCPNEKVAKEIARAVVEKRLAACVNLIPQI-TSIYEWKGKIEEDSEVLMMIKT 144
           T   ++  + I +A VE  L AC NL+P    +++  K  + E+ ++++ + T
Sbjct: 903 TSTKQRPKRSIRKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGT 955


>gi|103472005 antigen identified by monoclonal antibody Ki-67 isoform
            1 [Homo sapiens]
          Length = 3256

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 93   TCPNEKVAKEIARAVVEKRLAACVNLIPQI-TSIYEWKGKIEEDSEVLMMIKT 144
            T   ++  + I +A VE  L AC NL+P    +++  K  + E+ ++++ + T
Sbjct: 1263 TSTKQRPKRSIRKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGT 1315


>gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens]
          Length = 558

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 17/124 (13%)

Query: 55  LLPRVLLTMASGSPPTQPSPASDSG--SGYVPGSVSAA----------FVTCPNEKVAKE 102
           LL R+++ +     P  P P    G  SG V   V+            F+ C NEK++K+
Sbjct: 433 LLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETLFIPCENEKISKQ 492

Query: 103 --IARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVH 160
             +   +V+ R     N      +I  W+  + +   +   ++T   ++   T  +  + 
Sbjct: 493 LHLCYNIVKDRYVRVSN---NNQTISGWENGVWKMESIFRKVETDWHMITVFTPMLIFLV 549

Query: 161 PYEV 164
           P ++
Sbjct: 550 PLKL 553


>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 52  RLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSVSAAFVTCP 95
           RLLL PR +    + SPP +P+  S  G    P  + +  V  P
Sbjct: 90  RLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAP 133


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.130    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,695,652
Number of Sequences: 37866
Number of extensions: 338311
Number of successful extensions: 2166
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2139
Number of HSP's gapped (non-prelim): 52
length of query: 198
length of database: 18,247,518
effective HSP length: 97
effective length of query: 101
effective length of database: 14,574,516
effective search space: 1472026116
effective search space used: 1472026116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.