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Search of human proteins with 13470094
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13470094 apolipoprotein L5 [Homo sapiens]
(433 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13470094 apolipoprotein L5 [Homo sapiens] 875 0.0
gi|13449281 apolipoprotein L6 [Homo sapiens] 188 7e-48
gi|13562090 apolipoprotein L2 [Homo sapiens] 136 4e-32
gi|22035653 apolipoprotein L2 [Homo sapiens] 136 4e-32
gi|22035646 apolipoprotein L3 isoform 1 [Homo sapiens] 135 7e-32
gi|211938442 apolipoprotein L1 isoform c precursor [Homo sapiens] 110 3e-24
gi|211938440 apolipoprotein L1 isoform a precursor [Homo sapiens] 110 3e-24
gi|21735616 apolipoprotein L1 isoform b precursor [Homo sapiens] 110 3e-24
gi|21735614 apolipoprotein L1 isoform a precursor [Homo sapiens] 110 3e-24
gi|19923626 apolipoprotein L4 isoform 1 [Homo sapiens] 102 9e-22
gi|22035657 apolipoprotein L4 isoform 2 precursor [Homo sapiens] 102 9e-22
gi|22035650 apolipoprotein L3 isoform 3 [Homo sapiens] 100 3e-21
gi|22035648 apolipoprotein L3 isoform 3 [Homo sapiens] 100 3e-21
gi|194353995 apolipoprotein L domain containing 1 isoform 1 [Hom... 42 0.001
gi|194353993 apolipoprotein L domain containing 1 isoform 2 [Hom... 42 0.001
gi|110611156 laminin, gamma 3 precursor [Homo sapiens] 39 0.012
gi|91984775 regulator of telomere elongation helicase 1 isoform ... 35 0.13
gi|7706541 regulator of telomere elongation helicase 1 isoform 1... 35 0.13
gi|119943102 CREB binding protein isoform b [Homo sapiens] 35 0.17
gi|119943104 CREB binding protein isoform a [Homo sapiens] 35 0.17
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 34 0.23
gi|239756926 PREDICTED: similar to TBC1 domain family, member 3 ... 34 0.30
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 33 0.50
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 32 1.1
gi|114688046 TBC1 domain family, member 4 [Homo sapiens] 32 1.1
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 31 1.9
gi|110832843 TBP-associated factor 4 [Homo sapiens] 31 1.9
gi|94536798 high mobility group AT-hook 1-like 4 [Homo sapiens] 31 1.9
gi|112382372 guanylate binding protein 3 [Homo sapiens] 31 1.9
gi|190570174 cytochrome P450, family 21, subfamily A, polypeptid... 31 2.5
>gi|13470094 apolipoprotein L5 [Homo sapiens]
Length = 433
Score = 875 bits (2261), Expect = 0.0
Identities = 433/433 (100%), Positives = 433/433 (100%)
Query: 1 MPCGKQGNLQVPGSKVLPGLGEGCKEMWLRKVIYGGEVWGKSPEPEFPSLVNLCQSWKIN 60
MPCGKQGNLQVPGSKVLPGLGEGCKEMWLRKVIYGGEVWGKSPEPEFPSLVNLCQSWKIN
Sbjct: 1 MPCGKQGNLQVPGSKVLPGLGEGCKEMWLRKVIYGGEVWGKSPEPEFPSLVNLCQSWKIN 60
Query: 61 NLMSTVHSDEAGMLSYFLFEELMRCDKDSMPDGNLSEEEKLFLSYFPLHKFELEQNIKEL 120
NLMSTVHSDEAGMLSYFLFEELMRCDKDSMPDGNLSEEEKLFLSYFPLHKFELEQNIKEL
Sbjct: 61 NLMSTVHSDEAGMLSYFLFEELMRCDKDSMPDGNLSEEEKLFLSYFPLHKFELEQNIKEL 120
Query: 121 NTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAA 180
NTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAA
Sbjct: 121 NTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAA 180
Query: 181 AITNIVTNVLENRSNSAARDKASRLGPLTTSHEAFGGINWSEIEAAGFCVNKCVKAIQGI 240
AITNIVTNVLENRSNSAARDKASRLGPLTTSHEAFGGINWSEIEAAGFCVNKCVKAIQGI
Sbjct: 181 AITNIVTNVLENRSNSAARDKASRLGPLTTSHEAFGGINWSEIEAAGFCVNKCVKAIQGI 240
Query: 241 KDLHAYQMAKSNSGFMAMVKNFVAKRHIPFWTARGVQRAFEGTTLAMTNGAWVMGAAGAG 300
KDLHAYQMAKSNSGFMAMVKNFVAKRHIPFWTARGVQRAFEGTTLAMTNGAWVMGAAGAG
Sbjct: 241 KDLHAYQMAKSNSGFMAMVKNFVAKRHIPFWTARGVQRAFEGTTLAMTNGAWVMGAAGAG 300
Query: 301 FLLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLEQELDRLTQHHRHLPQKASQTCSS 360
FLLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLEQELDRLTQHHRHLPQKASQTCSS
Sbjct: 301 FLLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLEQELDRLTQHHRHLPQKASQTCSS 360
Query: 361 SRGRAVRGSRVVKPEGSRSPLPWPVVEHQPRLGPGVALRTPKRTVSAPRMLGHQPAPPAP 420
SRGRAVRGSRVVKPEGSRSPLPWPVVEHQPRLGPGVALRTPKRTVSAPRMLGHQPAPPAP
Sbjct: 361 SRGRAVRGSRVVKPEGSRSPLPWPVVEHQPRLGPGVALRTPKRTVSAPRMLGHQPAPPAP 420
Query: 421 ARKGRQAPGRHRQ 433
ARKGRQAPGRHRQ
Sbjct: 421 ARKGRQAPGRHRQ 433
>gi|13449281 apolipoprotein L6 [Homo sapiens]
Length = 343
Score = 188 bits (478), Expect = 7e-48
Identities = 112/284 (39%), Positives = 165/284 (58%), Gaps = 7/284 (2%)
Query: 85 CDKDSMPDGNLSEEEKLFLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSS 144
C+ + DG+LS EEK+FL FP K +L+ NI +L LAD +D TH+ TK ++VA+S+
Sbjct: 25 CEDVELQDGDLSPEEKIFLREFPRLKEDLKGNIDKLRALADDIDKTHKKFTKANMVATST 84
Query: 145 GAVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVTNVLENRSNSAARDKASR 204
+SGVM++LGLALAP T GGSL+LS G GL AA +T+IV+ LE N A+ +A
Sbjct: 85 AVISGVMSLLGLALAPATGGGSLLLSTAGQGLATAAGVTSIVSGTLERSKNKEAQARAED 144
Query: 205 LGPLTTSHEAFGGINWSE-IEAAGFCVNKCVKAIQ-GIKDLHAYQMAKSNSGFMAMVKNF 262
+ P + ++ + AAG + ++ K++ A+ ++N K
Sbjct: 145 ILPTYDQEDREDEEEKADYVTAAGKIIYNLRNTLKYAKKNVRAFWKLRANPRLANATKRL 204
Query: 263 VAKRHIPFWTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGAR 322
+ + + VQ+AF GTTLAMT A V+G + F L D+++ + WKHL++GAR
Sbjct: 205 LTTGQVSSRSRVQVQKAFAGTTLAMTKNARVLGGVMSAFSLGYDLATLSKEWKHLKEGAR 264
Query: 323 TETAEELRALAKKLEQELDRLTQHHRHLPQKASQTCSSSRGRAV 366
T+ AEELRA A +LE++L LTQ ++ L QK SR R V
Sbjct: 265 TKFAEELRAKALELERKLTELTQLYKSLQQKV-----RSRARGV 303
>gi|13562090 apolipoprotein L2 [Homo sapiens]
Length = 337
Score = 136 bits (342), Expect = 4e-32
Identities = 97/283 (34%), Positives = 150/283 (53%), Gaps = 15/283 (5%)
Query: 73 MLSYFLFEELMRCDKDSMPDGNLSEEEKLFLSYFPLHKFELEQNIKELNTLADQVDTTHE 132
+ S+ + ++ R DKD + + FL FP K ELE +I++L LA++V+ H
Sbjct: 59 LASHMVMKDKNRHDKDQ-------QHRQWFLKEFPRLKRELEDHIRKLRALAEEVEQVHR 111
Query: 133 LLTKTSLVASSSGAVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVTNVLEN 192
T ++V++S G SG++ +LGL LAP T G S +L TG GLGAAAA+ I +V+E
Sbjct: 112 GTTIANVVSNSVGTTSGILTLLGLGLAPFTEGISFVLLDTGMGLGAAAAVAGITCSVVEL 171
Query: 193 RSNSAARDKASRLGPLTTS----HEAFGGINWSEIEAAGFCVNKCVKAIQGI-KDLHAYQ 247
+ AR +A L T+ + F G N + V+ + QGI +++ A +
Sbjct: 172 VNKLRARAQARNLDQSGTNVAKVMKEFVGGNTPNVLT---LVDNWYQVTQGIGRNIRAIR 228
Query: 248 MAKSNSGFMAMVKNFVAKRHIPFWTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDM 307
A++N A I V+R EG AM+ G ++GAA G LL+ D+
Sbjct: 229 RARANPQLGAYAPPPHIIGRISAEGGEQVERVVEGPAQAMSRGTMIVGAATGGILLLLDV 288
Query: 308 SSFLQSWKHLEDGARTETAEELRALAKKLEQELDRLTQHHRHL 350
S KHL +GA++E+AEEL+ A++LE +L+ LT+ H L
Sbjct: 289 VSLAYESKHLLEGAKSESAEELKKRAQELEGKLNFLTKIHEML 331
>gi|22035653 apolipoprotein L2 [Homo sapiens]
Length = 337
Score = 136 bits (342), Expect = 4e-32
Identities = 97/283 (34%), Positives = 150/283 (53%), Gaps = 15/283 (5%)
Query: 73 MLSYFLFEELMRCDKDSMPDGNLSEEEKLFLSYFPLHKFELEQNIKELNTLADQVDTTHE 132
+ S+ + ++ R DKD + + FL FP K ELE +I++L LA++V+ H
Sbjct: 59 LASHMVMKDKNRHDKDQ-------QHRQWFLKEFPRLKRELEDHIRKLRALAEEVEQVHR 111
Query: 133 LLTKTSLVASSSGAVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVTNVLEN 192
T ++V++S G SG++ +LGL LAP T G S +L TG GLGAAAA+ I +V+E
Sbjct: 112 GTTIANVVSNSVGTTSGILTLLGLGLAPFTEGISFVLLDTGMGLGAAAAVAGITCSVVEL 171
Query: 193 RSNSAARDKASRLGPLTTS----HEAFGGINWSEIEAAGFCVNKCVKAIQGI-KDLHAYQ 247
+ AR +A L T+ + F G N + V+ + QGI +++ A +
Sbjct: 172 VNKLRARAQARNLDQSGTNVAKVMKEFVGGNTPNVLT---LVDNWYQVTQGIGRNIRAIR 228
Query: 248 MAKSNSGFMAMVKNFVAKRHIPFWTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDM 307
A++N A I V+R EG AM+ G ++GAA G LL+ D+
Sbjct: 229 RARANPQLGAYAPPPHIIGRISAEGGEQVERVVEGPAQAMSRGTMIVGAATGGILLLLDV 288
Query: 308 SSFLQSWKHLEDGARTETAEELRALAKKLEQELDRLTQHHRHL 350
S KHL +GA++E+AEEL+ A++LE +L+ LT+ H L
Sbjct: 289 VSLAYESKHLLEGAKSESAEELKKRAQELEGKLNFLTKIHEML 331
>gi|22035646 apolipoprotein L3 isoform 1 [Homo sapiens]
Length = 402
Score = 135 bits (340), Expect = 7e-32
Identities = 87/251 (34%), Positives = 143/251 (56%), Gaps = 8/251 (3%)
Query: 102 FLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPV 161
FL FP K +++++I++L LA+ ++ H T +++V+SS+GA SG+M++ GL LAP
Sbjct: 152 FLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSSSTGAASGIMSLAGLVLAPF 211
Query: 162 TAGGSLMLSATGTGLGAAAAITNIVTNVLENRSNSAARDKASRLGPLTTSH-EAFGGINW 220
TAG SL L+A G GLGAA+A+T I T+++E+ S+A +ASRL + + F +
Sbjct: 212 TAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLKVFKEVMR 271
Query: 221 SEIEAAGFCVNKCVKAIQGI-KDLHAYQMAKSNSGFMAMVKNFVAKRHIPFWTARGVQRA 279
+N +A Q I ++ A + A+ A + V I + +R
Sbjct: 272 DITPNLLSLLNNYYEATQTIGSEIRAIRQAR------ARARLPVTTWRISAGSGGQAERT 325
Query: 280 FEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLEQE 339
GTT A++ GA ++ A +G L D+ + + KHL +GA++ +AEELR A++LE+
Sbjct: 326 IAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQELEEN 385
Query: 340 LDRLTQHHRHL 350
L LTQ ++ L
Sbjct: 386 LMELTQIYQRL 396
>gi|211938442 apolipoprotein L1 isoform c precursor [Homo sapiens]
Length = 380
Score = 110 bits (274), Expect = 3e-24
Identities = 84/260 (32%), Positives = 134/260 (51%), Gaps = 18/260 (6%)
Query: 102 FLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPV 161
FL FP K ELE NI+ L LAD V H+ T ++V+ S SG++ ++G+ LAP
Sbjct: 122 FLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPF 181
Query: 162 TAGGSLMLSATGTGLGAAAAITNIVTNVLENR----SNSAARDKASR-LGPLTTSHEAFG 216
T GGSL+L G LG AA+T I ++ ++ + + A D + L L E G
Sbjct: 182 TEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHDLVIKSLDKLKEVREFLG 241
Query: 217 GINWSEIEAAGFCVNKCVKAIQGI-KDLHAYQMAKSNSGFMAMVKNFVAKR-----HIPF 270
+ + AG + +GI KD+ A + A++N + V + A R I
Sbjct: 242 ENISNFLSLAG----NTYQLTRGIGKDIRALRRARAN---LQSVPHASASRPRVTEPISA 294
Query: 271 WTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELR 330
+ V+R E + L M+ G + A F L+ D+ + KHL +GA++ETAEEL+
Sbjct: 295 ESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELK 354
Query: 331 ALAKKLEQELDRLTQHHRHL 350
+A++LE++L+ L +++ L
Sbjct: 355 KVAQELEEKLNILNNNYKIL 374
>gi|211938440 apolipoprotein L1 isoform a precursor [Homo sapiens]
Length = 398
Score = 110 bits (274), Expect = 3e-24
Identities = 84/260 (32%), Positives = 134/260 (51%), Gaps = 18/260 (6%)
Query: 102 FLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPV 161
FL FP K ELE NI+ L LAD V H+ T ++V+ S SG++ ++G+ LAP
Sbjct: 140 FLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPF 199
Query: 162 TAGGSLMLSATGTGLGAAAAITNIVTNVLENR----SNSAARDKASR-LGPLTTSHEAFG 216
T GGSL+L G LG AA+T I ++ ++ + + A D + L L E G
Sbjct: 200 TEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHDLVIKSLDKLKEVREFLG 259
Query: 217 GINWSEIEAAGFCVNKCVKAIQGI-KDLHAYQMAKSNSGFMAMVKNFVAKR-----HIPF 270
+ + AG + +GI KD+ A + A++N + V + A R I
Sbjct: 260 ENISNFLSLAG----NTYQLTRGIGKDIRALRRARAN---LQSVPHASASRPRVTEPISA 312
Query: 271 WTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELR 330
+ V+R E + L M+ G + A F L+ D+ + KHL +GA++ETAEEL+
Sbjct: 313 ESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELK 372
Query: 331 ALAKKLEQELDRLTQHHRHL 350
+A++LE++L+ L +++ L
Sbjct: 373 KVAQELEEKLNILNNNYKIL 392
>gi|21735616 apolipoprotein L1 isoform b precursor [Homo sapiens]
Length = 414
Score = 110 bits (274), Expect = 3e-24
Identities = 84/260 (32%), Positives = 134/260 (51%), Gaps = 18/260 (6%)
Query: 102 FLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPV 161
FL FP K ELE NI+ L LAD V H+ T ++V+ S SG++ ++G+ LAP
Sbjct: 156 FLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPF 215
Query: 162 TAGGSLMLSATGTGLGAAAAITNIVTNVLENR----SNSAARDKASR-LGPLTTSHEAFG 216
T GGSL+L G LG AA+T I ++ ++ + + A D + L L E G
Sbjct: 216 TEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHDLVIKSLDKLKEVREFLG 275
Query: 217 GINWSEIEAAGFCVNKCVKAIQGI-KDLHAYQMAKSNSGFMAMVKNFVAKR-----HIPF 270
+ + AG + +GI KD+ A + A++N + V + A R I
Sbjct: 276 ENISNFLSLAG----NTYQLTRGIGKDIRALRRARAN---LQSVPHASASRPRVTEPISA 328
Query: 271 WTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELR 330
+ V+R E + L M+ G + A F L+ D+ + KHL +GA++ETAEEL+
Sbjct: 329 ESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELK 388
Query: 331 ALAKKLEQELDRLTQHHRHL 350
+A++LE++L+ L +++ L
Sbjct: 389 KVAQELEEKLNILNNNYKIL 408
>gi|21735614 apolipoprotein L1 isoform a precursor [Homo sapiens]
Length = 398
Score = 110 bits (274), Expect = 3e-24
Identities = 84/260 (32%), Positives = 134/260 (51%), Gaps = 18/260 (6%)
Query: 102 FLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPV 161
FL FP K ELE NI+ L LAD V H+ T ++V+ S SG++ ++G+ LAP
Sbjct: 140 FLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPF 199
Query: 162 TAGGSLMLSATGTGLGAAAAITNIVTNVLENR----SNSAARDKASR-LGPLTTSHEAFG 216
T GGSL+L G LG AA+T I ++ ++ + + A D + L L E G
Sbjct: 200 TEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHDLVIKSLDKLKEVREFLG 259
Query: 217 GINWSEIEAAGFCVNKCVKAIQGI-KDLHAYQMAKSNSGFMAMVKNFVAKR-----HIPF 270
+ + AG + +GI KD+ A + A++N + V + A R I
Sbjct: 260 ENISNFLSLAG----NTYQLTRGIGKDIRALRRARAN---LQSVPHASASRPRVTEPISA 312
Query: 271 WTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELR 330
+ V+R E + L M+ G + A F L+ D+ + KHL +GA++ETAEEL+
Sbjct: 313 ESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELK 372
Query: 331 ALAKKLEQELDRLTQHHRHL 350
+A++LE++L+ L +++ L
Sbjct: 373 KVAQELEEKLNILNNNYKIL 392
>gi|19923626 apolipoprotein L4 isoform 1 [Homo sapiens]
Length = 348
Score = 102 bits (253), Expect = 9e-22
Identities = 73/253 (28%), Positives = 134/253 (52%), Gaps = 16/253 (6%)
Query: 102 FLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPV 161
FL FP +++++++I+ L +A++++ H ++V+ S+G +++++G+ LAP
Sbjct: 105 FLKEFPQIRWKIQESIERLRVIANEIEKVHRGCVIANVVSGSTG----ILSVIGVMLAPF 160
Query: 162 TAGGSLMLSATGTGLGAAAAITNIVTNVLENRSNSAARDKASRLGPLTTSH-EAFGGI-- 218
TAG SL ++A G GLG A+A I ++++EN +A ASRL +T EA I
Sbjct: 161 TAGLSLSITAAGVGLGIASATAGIASSIVENTYTRSAELTASRLTATSTDQLEALRDILR 220
Query: 219 -NWSEIEAAGFCVNKCVKAIQGIKDLHAYQMAKSNSGFMAMVKNFVAKRHIPFWTARGVQ 277
+ + ++ K I D+H + +K+ G + +A R++P +
Sbjct: 221 DITPNVLSFALDFDEATKMI--ANDVHTLRRSKATVG-----RPLIAWRYVPINVVETL- 272
Query: 278 RAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLE 337
R T + A +G A +G L++ D+ + +Q L GA++E+AE LR A++LE
Sbjct: 273 RTRGAPTRIVRKVARNLGKATSGVLVVLDVVNLVQDSLDLHKGAKSESAESLRQWAQELE 332
Query: 338 QELDRLTQHHRHL 350
+ L+ LT H+ L
Sbjct: 333 ENLNELTHIHQSL 345
>gi|22035657 apolipoprotein L4 isoform 2 precursor [Homo sapiens]
Length = 351
Score = 102 bits (253), Expect = 9e-22
Identities = 73/253 (28%), Positives = 134/253 (52%), Gaps = 16/253 (6%)
Query: 102 FLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPV 161
FL FP +++++++I+ L +A++++ H ++V+ S+G +++++G+ LAP
Sbjct: 108 FLKEFPQIRWKIQESIERLRVIANEIEKVHRGCVIANVVSGSTG----ILSVIGVMLAPF 163
Query: 162 TAGGSLMLSATGTGLGAAAAITNIVTNVLENRSNSAARDKASRLGPLTTSH-EAFGGI-- 218
TAG SL ++A G GLG A+A I ++++EN +A ASRL +T EA I
Sbjct: 164 TAGLSLSITAAGVGLGIASATAGIASSIVENTYTRSAELTASRLTATSTDQLEALRDILR 223
Query: 219 -NWSEIEAAGFCVNKCVKAIQGIKDLHAYQMAKSNSGFMAMVKNFVAKRHIPFWTARGVQ 277
+ + ++ K I D+H + +K+ G + +A R++P +
Sbjct: 224 DITPNVLSFALDFDEATKMI--ANDVHTLRRSKATVG-----RPLIAWRYVPINVVETL- 275
Query: 278 RAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLE 337
R T + A +G A +G L++ D+ + +Q L GA++E+AE LR A++LE
Sbjct: 276 RTRGAPTRIVRKVARNLGKATSGVLVVLDVVNLVQDSLDLHKGAKSESAESLRQWAQELE 335
Query: 338 QELDRLTQHHRHL 350
+ L+ LT H+ L
Sbjct: 336 ENLNELTHIHQSL 348
>gi|22035650 apolipoprotein L3 isoform 3 [Homo sapiens]
Length = 202
Score = 100 bits (248), Expect = 3e-21
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 8/202 (3%)
Query: 151 MNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVTNVLENRSNSAARDKASRLGPLTT 210
M++ GL LAP TAG SL L+A G GLGAA+A+T I T+++E+ S+A +ASRL +
Sbjct: 1 MSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSI 60
Query: 211 SH-EAFGGINWSEIEAAGFCVNKCVKAIQGI-KDLHAYQMAKSNSGFMAMVKNFVAKRHI 268
+ F + +N +A Q I ++ A + A+ A + V I
Sbjct: 61 DRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQAR------ARARLPVTTWRI 114
Query: 269 PFWTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEE 328
+ +R GTT A++ GA ++ A +G L D+ + + KHL +GA++ +AEE
Sbjct: 115 SAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEE 174
Query: 329 LRALAKKLEQELDRLTQHHRHL 350
LR A++LE+ L LTQ ++ L
Sbjct: 175 LRRQAQELEENLMELTQIYQRL 196
>gi|22035648 apolipoprotein L3 isoform 3 [Homo sapiens]
Length = 202
Score = 100 bits (248), Expect = 3e-21
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 8/202 (3%)
Query: 151 MNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVTNVLENRSNSAARDKASRLGPLTT 210
M++ GL LAP TAG SL L+A G GLGAA+A+T I T+++E+ S+A +ASRL +
Sbjct: 1 MSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSI 60
Query: 211 SH-EAFGGINWSEIEAAGFCVNKCVKAIQGI-KDLHAYQMAKSNSGFMAMVKNFVAKRHI 268
+ F + +N +A Q I ++ A + A+ A + V I
Sbjct: 61 DRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQAR------ARARLPVTTWRI 114
Query: 269 PFWTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEE 328
+ +R GTT A++ GA ++ A +G L D+ + + KHL +GA++ +AEE
Sbjct: 115 SAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEE 174
Query: 329 LRALAKKLEQELDRLTQHHRHL 350
LR A++LE+ L LTQ ++ L
Sbjct: 175 LRRQAQELEENLMELTQIYQRL 196
>gi|194353995 apolipoprotein L domain containing 1 isoform 1 [Homo
sapiens]
Length = 279
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 132 ELLTKTSLVASSSG----AVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVT 187
E L + SLVA+ +G A + I+GL+L+PVT G SL++SA G G+ A I +
Sbjct: 77 ERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITS 136
Query: 188 NV 189
++
Sbjct: 137 DL 138
>gi|194353993 apolipoprotein L domain containing 1 isoform 2 [Homo
sapiens]
Length = 248
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 132 ELLTKTSLVASSSG----AVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVT 187
E L + SLVA+ +G A + I+GL+L+PVT G SL++SA G G+ A I +
Sbjct: 46 ERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITS 105
Query: 188 NV 189
++
Sbjct: 106 DL 107
>gi|110611156 laminin, gamma 3 precursor [Homo sapiens]
Length = 1575
Score = 38.5 bits (88), Expect = 0.012
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 14/136 (10%)
Query: 302 LLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLEQELDRLTQHHRHLPQKASQTCSSS 361
L K + + SW+H+ TE A L+ A+ ++ + LT+ H+ +Q SS
Sbjct: 1270 LKAKALEKTVASWQHMA----TEAARTLQTAAQATLRQTEPLTKLHQEARAALTQASSSV 1325
Query: 362 RGRAVR--GSRVVKPEGSRSPLPWPVVEHQPRL-------GPGVALRTPKRTVSAPRMLG 412
+ V G+R + + L +P + Q L + T K+T A RMLG
Sbjct: 1326 QAATVTVMGARTLLADLEGMKLQFPRPKDQAALQRKADSVSDRLLADTRKKTKQAERMLG 1385
Query: 413 H-QPAPPAPARKGRQA 427
+ P + +KGR+A
Sbjct: 1386 NAAPLSSSAKKKGREA 1401
>gi|91984775 regulator of telomere elongation helicase 1 isoform 2
[Homo sapiens]
Length = 1300
Score = 35.0 bits (79), Expect = 0.13
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 349 HLPQKASQTCSSSRGRAVRGSRVVKPEGSRSPLPWPVVEHQ-PRLGPGVALRTPKRTVSA 407
H Q+ SQTC+ GR G P+ R +P PV+ H+ P+ GP + +T K
Sbjct: 1123 HHKQRFSQTCTDLTGRPYPGMEPPGPQEERLAVP-PVLTHRAPQPGPSRSEKTGKTQSKI 1181
Query: 408 PRMLGHQPA 416
L +PA
Sbjct: 1182 SSFLRQRPA 1190
>gi|7706541 regulator of telomere elongation helicase 1 isoform 1
[Homo sapiens]
Length = 1219
Score = 35.0 bits (79), Expect = 0.13
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 349 HLPQKASQTCSSSRGRAVRGSRVVKPEGSRSPLPWPVVEHQ-PRLGPGVALRTPKRTVSA 407
H Q+ SQTC+ GR G P+ R +P PV+ H+ P+ GP + +T K
Sbjct: 1123 HHKQRFSQTCTDLTGRPYPGMEPPGPQEERLAVP-PVLTHRAPQPGPSRSEKTGKTQSKI 1181
Query: 408 PRMLGHQPA 416
L +PA
Sbjct: 1182 SSFLRQRPA 1190
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 34.7 bits (78), Expect = 0.17
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 344 TQHHRHLPQKA--SQTCSSSRGRAVRGSRVVKPEGSRSPLPWPVVEHQPRLGPGVALRTP 401
T + R++PQ++ S T + + S P+ P P PV P P VA P
Sbjct: 1833 TMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPV-SMSPAGFPSVARTQP 1891
Query: 402 KRTVSAPRMLGHQPAPPAPARKGRQAPGRHRQ 433
TVS + PAPP PA+ A RQ
Sbjct: 1892 PTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQ 1923
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 34.7 bits (78), Expect = 0.17
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 344 TQHHRHLPQKA--SQTCSSSRGRAVRGSRVVKPEGSRSPLPWPVVEHQPRLGPGVALRTP 401
T + R++PQ++ S T + + S P+ P P PV P P VA P
Sbjct: 1871 TMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPV-SMSPAGFPSVARTQP 1929
Query: 402 KRTVSAPRMLGHQPAPPAPARKGRQAPGRHRQ 433
TVS + PAPP PA+ A RQ
Sbjct: 1930 PTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQ 1961
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 34.3 bits (77), Expect = 0.23
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 12/115 (10%)
Query: 324 ETAEELRALAKKLEQELDRLTQHHRHLPQ-----KASQTCSSSRGRAVRGSRVVKPE--- 375
ET E+LR L ++ QE D L +LP + + R RG +P
Sbjct: 578 ETMEQLRNLPQQCMQE-DFLVHEVTNLPVTEALIERENAAQLKKWRETRGELQYRPSRRL 636
Query: 376 -GSRSPLPWPVVEHQPRLGPGVALRT-PKRTVSAPRMLGHQPAPPAPARKGRQAP 428
GSR+ + QP LGP +L + P R G P+PP P R+ P
Sbjct: 637 HGSRA-IHEERRRQQPPLGPSSSLLSLPGLKSRGSRAAGGAPSPPPPVRRASAGP 690
>gi|239756926 PREDICTED: similar to TBC1 domain family, member 3
[Homo sapiens]
Length = 424
Score = 33.9 bits (76), Expect = 0.30
Identities = 33/111 (29%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
Query: 334 KKLEQELDRLTQHHRHLPQKASQTCSSSRGRAVRGSRVVK---------PEGSRSPLPWP 384
K L + +LT+ LP A SS R V SR K P G + PWP
Sbjct: 216 KHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPWP 275
Query: 385 VVEHQPRLGPGVALRTPKRTVSAPRM-LGHQPAP-PAPARKGRQAPGRHRQ 433
+ P P + P V +G Q P PA A+ G Q R Q
Sbjct: 276 IWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQ 326
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 33.1 bits (74), Expect = 0.50
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 6/114 (5%)
Query: 315 KHLEDGARTETAEELRALAKKLEQELDRLTQHHRHLPQKASQTCSSSRGRAVRGSRVVKP 374
K E A+T+ EE+ K++++L++ T H+ + Q+ + + + R P
Sbjct: 469 KERECDAKTQEKEEMMQTLNKMKEKLEKETTEHKQVKQQVADLTAQLHELSRRAVCASIP 528
Query: 375 EGSRSPLPWPVVEHQPRLGPGVALRTPKRTVSAPRMLGHQPAPPAPARKGRQAP 428
G P P P PG L P P G P PP P G P
Sbjct: 529 GG---PSPGAPGGPFPSSVPGSLLPPPP---PPPLPGGMLPPPPPPLPPGGPPP 576
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 32.0 bits (71), Expect = 1.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 342 RLTQHHRHLPQKASQTCSSSR---GRAVRGSRVVKPEGSRSPLPWPVVEHQPRLG---PG 395
++T+ HR P+K S++ SSS+ + S+ + LP P+ P
Sbjct: 196 KVTKEHRERPRKDSESKSSSKELEREQAKSSKDTSRKLGEGRLPKEEKAPPPKAAFKEPK 255
Query: 396 VALRTPKRTVSAPRMLGHQPAPPAPARKGRQAP 428
+AL+ K ++P+ G P PP P R + P
Sbjct: 256 MALKETKLESTSPKG-GPPPPPPPPPRASSKRP 287
>gi|114688046 TBC1 domain family, member 4 [Homo sapiens]
Length = 1298
Score = 32.0 bits (71), Expect = 1.1
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 63 MSTVHSDEAGMLSYFLFEELMRCDKDSMPDGNLSEEEKLFLSYF------PLHKFELEQN 116
+S + S E ++ FE ++ K+++PD N SE EK+ F LH +E+E +
Sbjct: 1121 LSLLSSQETLIMECESFENIVEFLKNTLPDMNTSEMEKIITQVFEMDISKQLHAYEVEYH 1180
Query: 117 I 117
+
Sbjct: 1181 V 1181
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 31.2 bits (69), Expect = 1.9
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 290 GAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLEQELDRLTQHHRH 349
G W++G G L L + + GAR E+L A A+ L + + Q HR
Sbjct: 633 GRWLVGLGRLGGCL-------LGLGRRIGPGARLVLQEQLLA-AESLLAAIAAVHQLHRG 684
Query: 350 LPQKASQTCSSSRGRAVRGSRVVKPEGSRSPLPWPVVEHQPRLGPGVALR 399
L ++ + RGR RG R + G PL V PG+ R
Sbjct: 685 LRRRQKELRHHGRGRGRRGGRRGRAVGLEVPLQVGVAHEDLAGLPGLGGR 734
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 31.2 bits (69), Expect = 1.9
Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 332 LAKKLEQELDRLTQHHRHLPQKASQTCSSSRGRAVRGSRVV--KPEGSRSPLPWPVVEHQ 389
L LE +L HH HL + + +++ G G+ VV P G+ P E
Sbjct: 25 LVGSLESQLAASAAHHHHLAPRTPEVRAAAAG--ALGNHVVSGSPAGAAGAGPAAPAEG- 81
Query: 390 PRLGPGVALRTPKRTVSAPRMLGHQ-PAPPAPAR 422
PG A P + P G Q P PP+P R
Sbjct: 82 ---APGAAPEPPPAGRARPGGGGPQRPGPPSPRR 112
>gi|94536798 high mobility group AT-hook 1-like 4 [Homo sapiens]
Length = 356
Score = 31.2 bits (69), Expect = 1.9
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 328 ELRALAKKLEQELDRLTQHHRHLPQKASQTCSSSRGRAVRGSRVVKPEGSRSPLPWPVVE 387
E RA ++L Q R +H ++ ++T ++S GR RG + G R+ P P+V
Sbjct: 217 EERARKRRL-QAARRAEEHKNQTIERLTKTAATS-GRGGRGGARGERRGGRAAAPAPMVR 274
Query: 388 HQPRLGPGVALRTPKRTVSAPRMLGHQPAPPAP 420
+ G L P V AP + +P+P P
Sbjct: 275 YCSG-AQGSTLSFPP-GVPAPTAVSQRPSPSGP 305
>gi|112382372 guanylate binding protein 3 [Homo sapiens]
Length = 595
Score = 31.2 bits (69), Expect = 1.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 49 SLVNLCQSWKINNLMSTVHSDEAGMLSYFLFEELMRCDKDSMPDGNLSEEEKLFLSYFP 107
+L L S + N M T++ L Y++ E R S PD N +E+ F+S+FP
Sbjct: 117 TLAVLLSSTLVYNSMGTINQQAMDQL-YYVTELTHRIRSKSSPDENENEDSADFVSFFP 174
>gi|190570174 cytochrome P450, family 21, subfamily A, polypeptide 2
isoform b [Homo sapiens]
Length = 465
Score = 30.8 bits (68), Expect = 2.5
Identities = 19/68 (27%), Positives = 27/68 (39%)
Query: 346 HHRHLPQKASQTCSSSRGRAVRGSRVVKPEGSRSPLPWPVVEHQPRLGPGVALRTPKRTV 405
HH + Q+ + G SRV + +R PL + RL P V L P RT
Sbjct: 280 HHPEIQQRLQEELDHELGPGASSSRVPYKDRARLPLLNATIAEVLRLRPVVPLALPHRTT 339
Query: 406 SAPRMLGH 413
+ G+
Sbjct: 340 RPSSISGY 347
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,584,683
Number of Sequences: 37866
Number of extensions: 861453
Number of successful extensions: 3907
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 3829
Number of HSP's gapped (non-prelim): 164
length of query: 433
length of database: 18,247,518
effective HSP length: 105
effective length of query: 328
effective length of database: 14,271,588
effective search space: 4681080864
effective search space used: 4681080864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.