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Search of human proteins with 59709758
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|59709758 centromere protein P [Homo sapiens]
(288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|59709758 centromere protein P [Homo sapiens] 570 e-163
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 37 0.020
gi|118498362 kinectin 1 isoform b [Homo sapiens] 33 0.38
gi|118498356 kinectin 1 isoform a [Homo sapiens] 33 0.38
gi|118498368 kinectin 1 isoform c [Homo sapiens] 33 0.38
gi|33620775 kinectin 1 isoform a [Homo sapiens] 33 0.38
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 32 0.65
gi|73747799 vacuolar protein sorting 52 [Homo sapiens] 32 0.65
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l... 31 1.1
gi|190194423 SPARC-like 1 [Homo sapiens] 31 1.1
gi|190341024 SPARC-like 1 [Homo sapiens] 31 1.1
gi|190194355 p90 autoantigen [Homo sapiens] 31 1.4
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 31 1.4
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 31 1.4
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 31 1.4
gi|16262452 cingulin [Homo sapiens] 30 1.9
gi|94557295 mitogen-activated protein kinase 8 interacting prote... 30 1.9
gi|94557297 mitogen-activated protein kinase 8 interacting prote... 30 1.9
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 30 2.5
gi|150456473 janus kinase and microtubule interacting protein 1 ... 30 3.2
gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens] 30 3.2
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l... 29 4.2
gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-l... 29 4.2
gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-l... 29 4.2
gi|51093830 bicaudal D homolog 1 isoform 2 [Homo sapiens] 29 4.2
gi|51039802 bicaudal D homolog 1 isoform 1 [Homo sapiens] 29 4.2
gi|153791628 MCF.2 cell line derived transforming sequence isofo... 29 4.2
gi|153791325 MCF.2 cell line derived transforming sequence isofo... 29 4.2
gi|23510377 KN motif and ankyrin repeat domains 1 isoform b [Hom... 29 5.5
gi|64464726 KN motif and ankyrin repeat domains 1 isoform a [Hom... 29 5.5
>gi|59709758 centromere protein P [Homo sapiens]
Length = 288
Score = 570 bits (1469), Expect = e-163
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MDAELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQL 60
MDAELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQL
Sbjct: 1 MDAELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQL 60
Query: 61 GHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKVLQRHRLSGNCHMVTFQLEF 120
GHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKVLQRHRLSGNCHMVTFQLEF
Sbjct: 61 GHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKVLQRHRLSGNCHMVTFQLEF 120
Query: 121 QILEIQNKERLSSAVTDLNIIMEPTECSELSEFVSRAEERKDLFMFFRSLHFFVEWFEYR 180
QILEIQNKERLSSAVTDLNIIMEPTECSELSEFVSRAEERKDLFMFFRSLHFFVEWFEYR
Sbjct: 121 QILEIQNKERLSSAVTDLNIIMEPTECSELSEFVSRAEERKDLFMFFRSLHFFVEWFEYR 180
Query: 181 KRTFKHLKEKYPDAVYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGKVFPKLDLLT 240
KRTFKHLKEKYPDAVYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGKVFPKLDLLT
Sbjct: 181 KRTFKHLKEKYPDAVYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGKVFPKLDLLT 240
Query: 241 KVPQRALELDKNRAIETAPLSFRTLVGLLGIEAALESLIKSLCAEENN 288
KVPQRALELDKNRAIETAPLSFRTLVGLLGIEAALESLIKSLCAEENN
Sbjct: 241 KVPQRALELDKNRAIETAPLSFRTLVGLLGIEAALESLIKSLCAEENN 288
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 37.0 bits (84), Expect = 0.020
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 21 ACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLESELSFLSTLTGINIRN 80
ACED + ++++ +Q +LE + LK + G +E+EL +
Sbjct: 685 ACEDV------RHQLEECLAGNNQLSLEKNTIVETLKMEKGEIEAELCWAKKRLLEEANK 738
Query: 81 HSKQTEDLTSTEMTEKSIRKVLQRHRLSGNCHMVTFQLEFQ-ILEIQNKERLSSAVTDLN 139
+ K E+L++ N + QLE + ++++ K+ + A N
Sbjct: 739 YEKTIEELSNAR-----------------NLNTSALQLEHEHLIKLNQKKDMEIAELKKN 781
Query: 140 IIMEPTECSELSEFVSRA-EERKDLFMFFRSLHFFVEWFEYRKRTFKHLKEKYPDAVYLS 198
I T+ E + +S + EE+K L F+E + R + +KY A+ +
Sbjct: 782 IEQMDTDHKETKDVLSSSLEEQKQLTQLINKKEIFIEKLKERSSKLQEELDKYSQALRKN 841
Query: 199 E 199
E
Sbjct: 842 E 842
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 32 KSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLESELSFL-STLTGINIRNHSKQTEDLTS 90
++++ S+Q Q ++ + + ++ ++ HL+ E L ++ + SKQ+ +L
Sbjct: 391 QNKIHVSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK 450
Query: 91 ---------TEMTEKSIRKVLQRHRLSGNCHMVTFQLEFQILEIQNK-ERLSSAVTDLNI 140
E+TEK+ K+ Q N QL+ Q+ E + + E + S +
Sbjct: 451 LRQDYARLVNELTEKT-GKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTA 509
Query: 141 IMEPTECSELSEFVSRAEERKDL 163
E + S+FV++ E + L
Sbjct: 510 EHEAAQQDLQSKFVAKENEVQSL 532
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 32 KSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLESELSFL-STLTGINIRNHSKQTEDLTS 90
++++ S+Q Q ++ + + ++ ++ HL+ E L ++ + SKQ+ +L
Sbjct: 391 QNKIHVSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK 450
Query: 91 ---------TEMTEKSIRKVLQRHRLSGNCHMVTFQLEFQILEIQNK-ERLSSAVTDLNI 140
E+TEK+ K+ Q N QL+ Q+ E + + E + S +
Sbjct: 451 LRQDYARLVNELTEKT-GKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTA 509
Query: 141 IMEPTECSELSEFVSRAEERKDL 163
E + S+FV++ E + L
Sbjct: 510 EHEAAQQDLQSKFVAKENEVQSL 532
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 32 KSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLESELSFL-STLTGINIRNHSKQTEDLTS 90
++++ S+Q Q ++ + + ++ ++ HL+ E L ++ + SKQ+ +L
Sbjct: 391 QNKIHVSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK 450
Query: 91 ---------TEMTEKSIRKVLQRHRLSGNCHMVTFQLEFQILEIQNK-ERLSSAVTDLNI 140
E+TEK+ K+ Q N QL+ Q+ E + + E + S +
Sbjct: 451 LRQDYARLVNELTEKT-GKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTA 509
Query: 141 IMEPTECSELSEFVSRAEERKDL 163
E + S+FV++ E + L
Sbjct: 510 EHEAAQQDLQSKFVAKENEVQSL 532
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 32 KSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLESELSFL-STLTGINIRNHSKQTEDLTS 90
++++ S+Q Q ++ + + ++ ++ HL+ E L ++ + SKQ+ +L
Sbjct: 391 QNKIHVSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK 450
Query: 91 ---------TEMTEKSIRKVLQRHRLSGNCHMVTFQLEFQILEIQNK-ERLSSAVTDLNI 140
E+TEK+ K+ Q N QL+ Q+ E + + E + S +
Sbjct: 451 LRQDYARLVNELTEKT-GKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTA 509
Query: 141 IMEPTECSELSEFVSRAEERKDL 163
E + S+FV++ E + L
Sbjct: 510 EHEAAQQDLQSKFVAKENEVQSL 532
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 32.0 bits (71), Expect = 0.65
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 33 SRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLESELSFLSTLTGINIRNHSKQTEDLTSTE 92
+R +K+ Q HQ L+ ++ +D N L +S+L +Q EDL S+
Sbjct: 994 TREKKALQEAHQQALDDLQAEEDKVNSLNKTKSKLE--------------QQVEDLESSL 1039
Query: 93 MTEKSIRKVLQRH--RLSGNCHMVTFQLEFQILEIQNKER 130
EK +R L+R+ +L G+ + + IL+++N ++
Sbjct: 1040 EQEKKLRVDLERNKRKLEGDLKLA----QESILDLENDKQ 1075
>gi|73747799 vacuolar protein sorting 52 [Homo sapiens]
Length = 723
Score = 32.0 bits (71), Expect = 0.65
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 62 HLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKVLQR-------HRLSGNCHMV 114
+LE EL + TG+++R++SKQ E L ++ +KSIR +Q H C V
Sbjct: 64 NLEDELVKEALKTGVDLRHYSKQVE-LELQQIEQKSIRDYIQESENIASLHNQITACDAV 122
Query: 115 TFQLEFQILEIQNKERLSSAVTDLNIIME 143
++E + Q+ LSS +++ + E
Sbjct: 123 LERMEQMLGAFQSD--LSSISSEIRTLQE 149
>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 602
Score = 31.2 bits (69), Expect = 1.1
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 30/204 (14%)
Query: 4 ELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHL 63
++ V L+ ++ L+ +P P E V + H K+L+ G L
Sbjct: 272 DMRRVEKLERSLSKLKNQMAEPLPP--EPPAVPSEVELQHL--------RKELERVAGEL 321
Query: 64 ESELSFLSTLTGINIRNHSK---QTEDLTSTEMTEKSIRKVLQR-------HRLSGNCHM 113
++++ ++ +N R + Q E L E + K LQ+ N +
Sbjct: 322 QAQVKNNQRISLLNQRQEERIREQEERLRKQEERIQEQHKSLQQLAKPQSVFEEPNNENK 381
Query: 114 VTFQLEFQILEIQN-----KERLSSAVTDLNIIMEPT---ECSELSEFVSRAEERKDLFM 165
T QLE Q+ E+Q KE +SA + P E S F+ EE+ DL
Sbjct: 382 STLQLEQQVKELQEKLGEVKESETSAQKEPEAARGPAAPGPGGESSSFMDHLEEKADLSE 441
Query: 166 FFR--SLHFFVEWFEYRKRTFKHL 187
+ L F W E + HL
Sbjct: 442 LVKKQELRFIQYWQERCHQKIHHL 465
>gi|190194423 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 23 EDPPAPWEEKSRVQKSFQAIHQFNLEGWKSS------KDLKNQLGHLESELSFLSTLTGI 76
ED EKS V KS + H+ + E KSS KD ++ GHL L + T +
Sbjct: 61 EDDSHHKAEKSSVLKSKEESHEQSAEQGKSSSQELGLKDQEDSDGHLSVNLEYAPTEGTL 120
Query: 77 NIRNHSKQTEDLTSTEMTE 95
+I+ + ++ +E T+
Sbjct: 121 DIKEDMSEPQEKKLSENTD 139
>gi|190341024 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 23 EDPPAPWEEKSRVQKSFQAIHQFNLEGWKSS------KDLKNQLGHLESELSFLSTLTGI 76
ED EKS V KS + H+ + E KSS KD ++ GHL L + T +
Sbjct: 61 EDDSHHKAEKSSVLKSKEESHEQSAEQGKSSSQELGLKDQEDSDGHLSVNLEYAPTEGTL 120
Query: 77 NIRNHSKQTEDLTSTEMTE 95
+I+ + ++ +E T+
Sbjct: 121 DIKEDMSEPQEKKLSENTD 139
>gi|190194355 p90 autoantigen [Homo sapiens]
Length = 905
Score = 30.8 bits (68), Expect = 1.4
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 15/173 (8%)
Query: 1 MDAELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQL 60
+ A+ E Q++I L + + EE + KS+ + Q N K +KDL+
Sbjct: 693 LKAQQVESERAQSDIEHLFQHNRKLESVAEEHEILTKSYMELLQRNESTEKKNKDLQITC 752
Query: 61 GHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKVL--QRHRLSGNCHMVTFQL 118
L ++ + L + K L E K ++ L + H+L+ N H T
Sbjct: 753 DSLNKQIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLA-NLHQKTKVQ 811
Query: 119 EFQILEIQNKERLSSAVTDLNIIMEPTECSELSEFVSRAEE-RKDLFMFFRSL 170
E +I +Q + D+ L + +SR E+ RK+L + SL
Sbjct: 812 EEKIKTLQKEREDKEETIDI-----------LRKELSRTEQIRKELSIKASSL 853
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 30.8 bits (68), Expect = 1.4
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 6 AEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLES 65
+ VRA++AE A LR E+ A E R ++ QA L W+ ++ + G LE+
Sbjct: 1361 SRVRAMEAEAAGLREQLEEEAAARERAGRELQTAQA----QLSEWRRRQE--EEAGALEA 1414
Query: 66 ELSFLSTLTGINIRNHSKQTEDLTS--TEMTEKSIRKVLQRHRLSGNCHMVTFQLEFQ-- 121
R +++ E LT E TE R R RL T LE Q
Sbjct: 1415 GEEAR--------RRAAREAEALTQRLAEKTETVDRLERGRRRLQQELDDATMDLEQQRQ 1466
Query: 122 -ILEIQNKER 130
+ ++ K+R
Sbjct: 1467 LVSTLEKKQR 1476
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 30.8 bits (68), Expect = 1.4
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 6 AEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLES 65
+ VRA++AE A LR E+ A E R ++ QA L W+ ++ + G LE+
Sbjct: 1353 SRVRAMEAEAAGLREQLEEEAAARERAGRELQTAQA----QLSEWRRRQE--EEAGALEA 1406
Query: 66 ELSFLSTLTGINIRNHSKQTEDLTS--TEMTEKSIRKVLQRHRLSGNCHMVTFQLEFQ-- 121
R +++ E LT E TE R R RL T LE Q
Sbjct: 1407 GEEAR--------RRAAREAEALTQRLAEKTETVDRLERGRRRLQQELDDATMDLEQQRQ 1458
Query: 122 -ILEIQNKER 130
+ ++ K+R
Sbjct: 1459 LVSTLEKKQR 1468
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 30.8 bits (68), Expect = 1.4
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 6 AEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLES 65
+ VRA++AE A LR E+ A E R ++ QA L W+ ++ + G LE+
Sbjct: 1394 SRVRAMEAEAAGLREQLEEEAAARERAGRELQTAQA----QLSEWRRRQE--EEAGALEA 1447
Query: 66 ELSFLSTLTGINIRNHSKQTEDLTS--TEMTEKSIRKVLQRHRLSGNCHMVTFQLEFQ-- 121
R +++ E LT E TE R R RL T LE Q
Sbjct: 1448 GEEAR--------RRAAREAEALTQRLAEKTETVDRLERGRRRLQQELDDATMDLEQQRQ 1499
Query: 122 -ILEIQNKER 130
+ ++ K+R
Sbjct: 1500 LVSTLEKKQR 1509
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 30.4 bits (67), Expect = 1.9
Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 50/257 (19%)
Query: 11 LQAEIAALRRACEDPPAPWE----EKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHLESE 66
LQ EI LR+A + A + +K + + Q + Q +S D QL LE +
Sbjct: 911 LQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEK 970
Query: 67 LSFLST----------LTGINIRNHSKQTEDLTSTEMTEKSIRKVLQRHRLSGNCHMVTF 116
+S L T L + Q + L + M E+S R+ L+ ++S
Sbjct: 971 VSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKIS--LERQNK 1028
Query: 117 QLEFQILEIQNKERLSSAVTDLN----IIMEPTECSELSEFVSRAEERKDLFMFFRSLHF 172
L+ ++ + ++ S++++ L ++ E + E + V ++ RK
Sbjct: 1029 DLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRK----------- 1077
Query: 173 FVEWFEYRKRTFKHLKEKYPDA-VYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGK 231
+R K L + D ++++ S+ +++ R Q+DE +
Sbjct: 1078 -------LERKVKELSIQIEDERQHVNDQKDQLSLRVKALKR-----------QVDEAEE 1119
Query: 232 VFPKLDLLTKVPQRALE 248
+LD L K QR +E
Sbjct: 1120 EIERLDGLRKKAQREVE 1136
>gi|94557295 mitogen-activated protein kinase 8 interacting protein
3 isoform 2 [Homo sapiens]
Length = 1330
Score = 30.4 bits (67), Expect = 1.9
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 40 QAIHQFNLEGWKSSK-DLKNQLGHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSI 98
Q + + LE K +K L+N++ LE EL + + I R ++ ED++S TE
Sbjct: 449 QEVLRGELEAAKQAKVKLENRIKELEEELKRVKSEAIIARREPKEEAEDVSSYLCTESDK 508
Query: 99 RKVLQRHRLSGNCHMVTFQLEFQILEIQNKERLSSAVTDLNIIMEPTECSELSEFVSRAE 158
+ QR R + M +E Q KERL +L + TE S +
Sbjct: 509 IPMAQRRRFT-RVEMARVLME----RNQYKERL----MELQEAVRWTEMIRASREHPSVQ 559
Query: 159 ERK--DLFMFFRSLHFFVEWFEYRKRTFK--HLKEKYPDAVYLSEGPSSCSMGIRSASRP 214
E+K ++ FF L KR + ++ K P S+ + I + SRP
Sbjct: 560 EKKKSTIWQFFSRLFSSSSSPPPAKRPYPSVNIHYKSPTTAGFSQRRNHAMCPISAGSRP 619
>gi|94557297 mitogen-activated protein kinase 8 interacting protein
3 isoform 1 [Homo sapiens]
Length = 1336
Score = 30.4 bits (67), Expect = 1.9
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 40 QAIHQFNLEGWKSSK-DLKNQLGHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSI 98
Q + + LE K +K L+N++ LE EL + + I R ++ ED++S TE
Sbjct: 455 QEVLRGELEAAKQAKVKLENRIKELEEELKRVKSEAIIARREPKEEAEDVSSYLCTESDK 514
Query: 99 RKVLQRHRLSGNCHMVTFQLEFQILEIQNKERLSSAVTDLNIIMEPTECSELSEFVSRAE 158
+ QR R + M +E Q KERL +L + TE S +
Sbjct: 515 IPMAQRRRFT-RVEMARVLME----RNQYKERL----MELQEAVRWTEMIRASREHPSVQ 565
Query: 159 ERK--DLFMFFRSLHFFVEWFEYRKRTFK--HLKEKYPDAVYLSEGPSSCSMGIRSASRP 214
E+K ++ FF L KR + ++ K P S+ + I + SRP
Sbjct: 566 EKKKSTIWQFFSRLFSSSSSPPPAKRPYPSVNIHYKSPTTAGFSQRRNHAMCPISAGSRP 625
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 30.0 bits (66), Expect = 2.5
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 49 GWKSSKDLKNQLGHLESELSFLSTLTGINIRNHSKQTE----DLTSTEMTEKSIRKVLQR 104
G+ +++ + E+ S+ ST+ G N S Q +LTS+ +T+ S Q
Sbjct: 1666 GFSDLGSIESTTENYENPSSYDSTMGGSICGNGSSQNSCSYSNLTSSSLTQSSCAVTQQM 1725
Query: 105 HRLSGNCHMV 114
+SG+C M+
Sbjct: 1726 SNISGSCSML 1735
>gi|150456473 janus kinase and microtubule interacting protein 1
isoform 1 [Homo sapiens]
Length = 831
Score = 29.6 bits (65), Expect = 3.2
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 83 KQTEDLTSTEMTEKSIRKVLQRHRLSGNCHMVTFQ---LEFQILEIQNKERLSSAVTDLN 139
KQ T+ ++ EK R ++ ++L Q LEF++LE++ +ER S A +L
Sbjct: 556 KQLLIRTNQDLLEKIYRLEMEENQLKNEMQDAKDQNELLEFRVLELEERERRSPAF-NLQ 614
Query: 140 IIMEPTECSELSEFVSRAEERKDL 163
I P S + E KD+
Sbjct: 615 ITTFPENHSSALQLFCHQEGVKDV 638
>gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens]
Length = 731
Score = 29.6 bits (65), Expect = 3.2
Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 7 EVRALQAEIAALRRACEDPPAPW-EEKSRVQKSFQAIHQFNLEGWKSSK-DLKNQLGHLE 64
E++ L +I LR +D A E ++ Q +H + G K+SK +L+ +L L+
Sbjct: 481 EIQKLMGQIHQLRSELQDMEAQQVNEAESAREQLQDLHD-QIAGQKASKQELETELERLK 539
Query: 65 SELSFL--------------------------STLTGINIRNHSKQTEDLTSTEMTEKSI 98
E ++ + LT + N S+ + ++TE I
Sbjct: 540 QEFHYIEEDLYRTKNTLQSRIKDRDEEIQKLRNQLTNKTLSNSSQSELENRLHQLTETLI 599
Query: 99 RKVLQRHRLSGNCHMVTFQLEFQILEIQNKERLSSAVTDLNI 140
+K LS + + FQLE ++ + SS + +N+
Sbjct: 600 QKQTMLESLSTEKNSLVFQLERLEQQMNSASGSSSNGSSINM 641
>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 29.3 bits (64), Expect = 4.2
Identities = 45/204 (22%), Positives = 73/204 (35%), Gaps = 30/204 (14%)
Query: 4 ELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHL 63
++ V L+ ++ L+ +P P E V + H K+L+ G L
Sbjct: 265 DMRRVEELERSLSKLKNQMAEPLPP--EPPAVPSEVELQHL--------RKELERVAGEL 314
Query: 64 ESELSFLSTLTGINIRNHS----------KQTEDLTSTEMTEKSIRKVLQRHRLSGNCHM 113
+S++ ++ +N R KQ E L + + K N +
Sbjct: 315 QSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQHEKLRQLAKPQSVFEELNNENK 374
Query: 114 VTFQLEFQILEIQN-----KERLSSAVTDLNIIM---EPTECSELSEFVSRAEERKDLFM 165
T QLE Q+ E+Q KE +SA + P E S F+ +E+ DL
Sbjct: 375 STLQLEQQVKELQEKLGEVKETETSAQKEPEAARGPGAPGPGGESSSFMDHLKEKADLSE 434
Query: 166 FFR--SLHFFVEWFEYRKRTFKHL 187
+ L F W E + HL
Sbjct: 435 LVKKQELRFIQYWQERCHQKIHHL 458
>gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 29.3 bits (64), Expect = 4.2
Identities = 45/204 (22%), Positives = 73/204 (35%), Gaps = 30/204 (14%)
Query: 4 ELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHL 63
++ V L+ ++ L+ +P P E V + H K+L+ G L
Sbjct: 265 DMRRVEELERSLSKLKNQMAEPLPP--EPPAVPSEVELQHL--------RKELERVAGEL 314
Query: 64 ESELSFLSTLTGINIRNHS----------KQTEDLTSTEMTEKSIRKVLQRHRLSGNCHM 113
+S++ ++ +N R KQ E L + + K N +
Sbjct: 315 QSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQHEKLRQLAKPQSVFEELNNENK 374
Query: 114 VTFQLEFQILEIQN-----KERLSSAVTDLNIIM---EPTECSELSEFVSRAEERKDLFM 165
T QLE Q+ E+Q KE +SA + P E S F+ +E+ DL
Sbjct: 375 STLQLEQQVKELQEKLGEVKETETSAQKEPEAARGPGAPGPGGESSSFMDHLKEKADLSE 434
Query: 166 FFR--SLHFFVEWFEYRKRTFKHL 187
+ L F W E + HL
Sbjct: 435 LVKKQELRFIQYWQERCHQKIHHL 458
>gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 595
Score = 29.3 bits (64), Expect = 4.2
Identities = 45/204 (22%), Positives = 73/204 (35%), Gaps = 30/204 (14%)
Query: 4 ELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHL 63
++ V L+ ++ L+ +P P E V + H K+L+ G L
Sbjct: 265 DMRRVEELERSLSKLKNQMAEPLPP--EPPAVPSEVELQHL--------RKELERVAGEL 314
Query: 64 ESELSFLSTLTGINIRNHS----------KQTEDLTSTEMTEKSIRKVLQRHRLSGNCHM 113
+S++ ++ +N R KQ E L + + K N +
Sbjct: 315 QSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQHEKLRQLAKPQSVFEELNNENK 374
Query: 114 VTFQLEFQILEIQN-----KERLSSAVTDLNIIM---EPTECSELSEFVSRAEERKDLFM 165
T QLE Q+ E+Q KE +SA + P E S F+ +E+ DL
Sbjct: 375 STLQLEQQVKELQEKLGEVKETETSAQKEPEAARGPGAPGPGGESSSFMDHLKEKADLSE 434
Query: 166 FFR--SLHFFVEWFEYRKRTFKHL 187
+ L F W E + HL
Sbjct: 435 LVKKQELRFIQYWQERCHQKIHHL 458
>gi|51093830 bicaudal D homolog 1 isoform 2 [Homo sapiens]
Length = 835
Score = 29.3 bits (64), Expect = 4.2
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 5 LAEVRALQAEIAALRRACEDPPAPW-EEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHL 63
+ EV L+AEI AL+ + +EK++ + Q + K++K+ ++ H+
Sbjct: 424 VTEVIDLKAEIKALKEKYNKSVENYTDEKAKYESKIQMYDEQVTSLEKTTKESGEKMAHM 483
Query: 64 ESELSFLSTLTGINIRNHS 82
E E L +T I NHS
Sbjct: 484 EKE---LQKMTSIANENHS 499
>gi|51039802 bicaudal D homolog 1 isoform 1 [Homo sapiens]
Length = 975
Score = 29.3 bits (64), Expect = 4.2
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 5 LAEVRALQAEIAALRRACEDPPAPW-EEKSRVQKSFQAIHQFNLEGWKSSKDLKNQLGHL 63
+ EV L+AEI AL+ + +EK++ + Q + K++K+ ++ H+
Sbjct: 424 VTEVIDLKAEIKALKEKYNKSVENYTDEKAKYESKIQMYDEQVTSLEKTTKESGEKMAHM 483
Query: 64 ESELSFLSTLTGINIRNHS 82
E E L +T I NHS
Sbjct: 484 EKE---LQKMTSIANENHS 499
>gi|153791628 MCF.2 cell line derived transforming sequence isoform
a [Homo sapiens]
Length = 985
Score = 29.3 bits (64), Expect = 4.2
Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 33/177 (18%)
Query: 43 HQFNLEG----WKSSKDLKNQLGHLE---SELSFLSTLTGI--NIRNHSKQTEDL--TST 91
HQ +E WK +D + + +E ++ + L+ +TG ++ K+ E+L S
Sbjct: 270 HQLKMEQYLQLWKFEQDFQQLVTEVEFLLNQQAELADVTGTIAQVKQKIKKLENLDENSQ 329
Query: 92 EMTEKSIRKVLQRHRLSGN-----------CHMVTFQLEFQILEIQNKE-RLSSAVTDLN 139
E+ K+ +L H+L+ N C+ + + + + EI+ K +LS
Sbjct: 330 ELLSKAQFVILHGHKLAANHHYALDLICQRCNELRYLSDILVNEIKAKRIQLSRTFKMHK 389
Query: 140 IIMEPTEC----------SELSEFVSRAEERKDLFMFFRSLHFFVEWFEYRKRTFKH 186
++ + +C E+ +F S+ + +K L L + + Y T ++
Sbjct: 390 LLQQARQCCDEGECLLANQEIDKFQSKEDAQKALQDIENFLEMALPFINYEPETLQY 446
>gi|153791325 MCF.2 cell line derived transforming sequence isoform
b [Homo sapiens]
Length = 925
Score = 29.3 bits (64), Expect = 4.2
Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 33/177 (18%)
Query: 43 HQFNLEG----WKSSKDLKNQLGHLE---SELSFLSTLTGI--NIRNHSKQTEDL--TST 91
HQ +E WK +D + + +E ++ + L+ +TG ++ K+ E+L S
Sbjct: 210 HQLKMEQYLQLWKFEQDFQQLVTEVEFLLNQQAELADVTGTIAQVKQKIKKLENLDENSQ 269
Query: 92 EMTEKSIRKVLQRHRLSGN-----------CHMVTFQLEFQILEIQNKE-RLSSAVTDLN 139
E+ K+ +L H+L+ N C+ + + + + EI+ K +LS
Sbjct: 270 ELLSKAQFVILHGHKLAANHHYALDLICQRCNELRYLSDILVNEIKAKRIQLSRTFKMHK 329
Query: 140 IIMEPTEC----------SELSEFVSRAEERKDLFMFFRSLHFFVEWFEYRKRTFKH 186
++ + +C E+ +F S+ + +K L L + + Y T ++
Sbjct: 330 LLQQARQCCDEGECLLANQEIDKFQSKEDAQKALQDIENFLEMALPFINYEPETLQY 386
>gi|23510377 KN motif and ankyrin repeat domains 1 isoform b [Homo
sapiens]
Length = 1194
Score = 28.9 bits (63), Expect = 5.5
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 58 NQLGHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKV 101
+Q+G L S+L +STL+ IN S TE+L + + + S+ K+
Sbjct: 699 SQMGSLNSQL--ISTLSSINSVMKSASTEELRNPDFQKTSLGKI 740
>gi|64464726 KN motif and ankyrin repeat domains 1 isoform a [Homo
sapiens]
Length = 1352
Score = 28.9 bits (63), Expect = 5.5
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 58 NQLGHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKV 101
+Q+G L S+L +STL+ IN S TE+L + + + S+ K+
Sbjct: 857 SQMGSLNSQL--ISTLSSINSVMKSASTEELRNPDFQKTSLGKI 898
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,044,811
Number of Sequences: 37866
Number of extensions: 396402
Number of successful extensions: 1273
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1262
Number of HSP's gapped (non-prelim): 51
length of query: 288
length of database: 18,247,518
effective HSP length: 101
effective length of query: 187
effective length of database: 14,423,052
effective search space: 2697110724
effective search space used: 2697110724
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.