| Name: VPS52 | Sequence: fasta or formatted (723aa) | NCBI GI: 73747799 | |
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Description: vacuolar protein sorting 52
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Referenced in: ER, Golgi, and the Secretory Pathway
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 9.0 65 4 C cysteine 0.8 6 1 D aspartate 4.3 31 2 E glutamate 9.3 67 4 F phenylalanine 4.6 33 2 G glycine 4.8 35 2 H histidine 2.1 15 2 I isoleucine 5.4 39 2 K lysine 3.7 27 2 L leucine 12.4 90 2 M methionine 2.5 18 2 N asparagine 2.9 21 2 P proline 3.3 24 2 Q glutamine 6.1 44 2 R arginine 7.9 57 2 S serine 6.4 46 2 T threonine 4.4 32 1 V valine 6.6 48 2 W tryptophan 0.4 3 1 Y tyrosine 3.0 22 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 vacuolar protein sorting 52 KIF27 0.012 kinesin family member 27 LRRC45 0.011 leucine rich repeat containing 45 LRBA 0.009 LPS-responsive vesicle trafficking, beach and ancho... EXOC1 0.009 exocyst complex component 1 isoform 2 RASSF8 0.009 Ras association (RalGDS/AF-6) domain family (N-termi... EPS15 0.009 epidermal growth factor receptor pathway substrate 15... EXOC1 0.008 exocyst complex component 1 isoform 1 EXOC1 0.008 exocyst complex component 1 isoform 1 GOLGB1 0.008 golgi autoantigen, golgin subfamily b, macrogolgin ... DNAH10 0.007 dynein, axonemal, heavy chain 10 KRT32 0.007 keratin 32 RABEP1 0.007 rabaptin, RAB GTPase binding effector protein 1 isof... DCTN1 0.007 dynactin 1 isoform 4 DCTN1 0.007 dynactin 1 isoform 3 DCTN1 0.007 dynactin 1 isoform 2 DCTN1 0.007 dynactin 1 isoform 1 KIFC3 0.007 kinesin family member C3 isoform 2 KIFC3 0.007 kinesin family member C3 isoform 3 KIFC3 0.007 kinesin family member C3 isoform 1 KRT33B 0.007 type I hair keratin 3B TRAF3 0.007 TNF receptor-associated factor 3 isoform 1 TRAF3 0.007 TNF receptor-associated factor 3 isoform 2 TRAF3 0.007 TNF receptor-associated factor 3 isoform 1 CENPE 0.007 centromere protein E NUMA1 0.007 nuclear mitotic apparatus protein 1 CDC42BPA 0.007 CDC42-binding protein kinase alpha isoform A CCDC136 0.007 coiled-coil domain containing 136 GOLGA5 0.007 Golgi autoantigen, golgin subfamily a, 5 IKBKG 0.007 inhibitor of kappa light polypeptide gene enhancer ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
