Guide to the Human Genome
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Name: DUOXA1 Sequence: fasta or formatted (483aa) NCBI GI: 46485465
Description:

Numb-interacting protein

Referenced in:

Notch Pathway
Thyroid and Thyroid Hormone Receptor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         45           2
 C cysteine            2.1         10           1
 D aspartate           2.5         12           1
 E glutamate           4.6         22           2
 F phenylalanine       4.3         21           2
 G glycine             7.9         38           2
 H histidine           2.5         12           2
 I isoleucine          3.3         16           2
 K lysine              2.9         14           1
 L leucine            14.3         69           2
 M methionine          2.7         13           1
 N asparagine          2.1         10           1
 P proline             7.9         38           2
 Q glutamine           2.1         10           2
 R arginine            7.0         34           2
 S serine              7.5         36           2
 T threonine           6.4         31           2
 V valine              4.8         23           2
 W tryptophan          2.9         14           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Numb-interacting protein 
DUOXA2                0.323   dual oxidase activator 2 
ARHGAP8               0.018   Rho GTPase activating protein 8 isoform 1 
LOC100292673          0.008   PREDICTED: hypothetical protein 
LOC100127987          0.008   PREDICTED: hypothetical protein LOC100127987 
LOC100291194          0.008   PREDICTED: hypothetical protein XP_002348117 
LOC100127987          0.008   PREDICTED: hypothetical protein LOC100127987 
LOC100288065          0.008   PREDICTED: hypothetical protein XP_002344233 
LOC100127987          0.008   PREDICTED: hypothetical protein LOC100127987 
TMEM144               0.008   transmembrane protein 144 
PRMT7                 0.007   protein arginine methyltransferase 7 
ZNF469                0.007   zinc finger protein 469 
GRIP2                 0.007   glutamate receptor interacting protein 2 
CYB561D2              0.007   cytochrome b-561 domain containing 2 
EIF3A                 0.007   eukaryotic translation initiation factor 3, subunit 1...
SLC22A7               0.006   solute carrier family 22 member 7 isoform b 
SLC22A7               0.006   solute carrier family 22 member 7 isoform a 
SH2D3C                0.006   SH2 domain containing 3C isoform e 
SH2D3C                0.006   SH2 domain containing 3C isoform d 
SH2D3C                0.006   SH2 domain containing 3C isoform c 
SH2D3C                0.006   SH2 domain containing 3C isoform c 
SH2D3C                0.006   SH2 domain containing 3C isoform b 
SH2D3C                0.006   SH2 domain containing 3C isoform a 
GTSE1                 0.005   G-2 and S-phase expressed 1 
LOC100128081          0.005   PREDICTED: hypothetical protein 
TMEM221               0.005   PREDICTED: transmembrane protein 221 
TMEM221               0.005   PREDICTED: transmembrane protein 221 
ST14                  0.005   matriptase 
ARID3A                0.005   AT rich interactive domain 3A (BRIGHT- like) protein ...
ZIC4                  0.005   zinc finger protein of the cerebellum 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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