Guide to the Human Genome
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Name: CYBASC3 Sequence: fasta or formatted (242aa) NCBI GI: 241896889
Description:

cytochrome b, ascorbate dependent 3 isoform 2

Referenced in:

Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt mRNA [242aa] cytochrome b, ascorbate dependent 3 isoform 2
alt prot [259aa] cytochrome b, ascorbate dependent 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         18           2
 C cysteine            1.2          3           1
 D aspartate           0.8          2           1
 E glutamate           1.7          4           1
 F phenylalanine       7.9         19           2
 G glycine             8.3         20           2
 H histidine           3.7          9           1
 I isoleucine          4.5         11           1
 K lysine              2.5          6           1
 L leucine            16.5         40           3
 M methionine          3.7          9           1
 N asparagine          2.9          7           1
 P proline             4.5         11           1
 Q glutamine           1.7          4           1
 R arginine            3.3          8           1
 S serine              8.7         21           2
 T threonine           4.1         10           2
 V valine              8.3         20           2
 W tryptophan          4.5         11           1
 Y tyrosine            3.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome b, ascorbate dependent 3 isoform 2 [Homo... 
CYBASC3               1.000   cytochrome b, ascorbate dependent 3 isoform 1 [Homo...
CYBASC3               1.000   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
CYBRD1                0.379   cytochrome b reductase 1 isoform 1 
CYB561                0.312   cytochrome b-561 
CYB561                0.312   cytochrome b-561 
CYB561                0.312   cytochrome b-561 
CYBRD1                0.069   cytochrome b reductase 1 isoform 2 
CYB561D1              0.042   cytochrome b-561 domain containing 1 isoform 2 [Homo...
CYB561D2              0.031   cytochrome b-561 domain containing 2 
CYB561D1              0.025   cytochrome b-561 domain containing 1 isoform 3 [Hom...
CYB561D1              0.025   cytochrome b-561 domain containing 1 isoform 1 [Hom...
SLC4A3                0.013   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.013   solute carrier family 4, anion exchanger, member 3 ...
GABRR2                0.010   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
LMBR1L                0.008   lipocalin-interacting membrane receptor 
GABRR1                0.008   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
ITGA8                 0.008   integrin, alpha 8 
ABCA8                 0.008   ATP-binding cassette, sub-family A member 8 
P2RY4                 0.008   pyrimidinergic receptor P2Y4 
OR2AG2                0.006   olfactory receptor, family 2, subfamily AG, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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