Guide to the Human Genome
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Name: CYB561 Sequence: fasta or formatted (251aa) NCBI GI: 63054828
Description:

cytochrome b-561

Referenced in:

Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt mRNA [251aa] cytochrome b-561
alt mRNA [251aa] cytochrome b-561
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         27           4
 C cysteine            1.2          3           1
 D aspartate           2.4          6           1
 E glutamate           3.6          9           2
 F phenylalanine       8.0         20           2
 G glycine            10.4         26           2
 H histidine           2.4          6           1
 I isoleucine          3.6          9           1
 K lysine              3.2          8           2
 L leucine            17.1         43           3
 M methionine          1.6          4           1
 N asparagine          2.0          5           1
 P proline             3.2          8           1
 Q glutamine           3.2          8           1
 R arginine            4.0         10           1
 S serine              5.6         14           1
 T threonine           4.4         11           2
 V valine              7.2         18           1
 W tryptophan          2.0          5           1
 Y tyrosine            4.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome b-561 
CYB561                1.000   cytochrome b-561 
CYB561                1.000   cytochrome b-561 
CYBRD1                0.313   cytochrome b reductase 1 isoform 1 
CYBASC3               0.311   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
CYBASC3               0.311   cytochrome b, ascorbate dependent 3 isoform 1 [Homo...
CYBASC3               0.311   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
CYB561D1              0.052   cytochrome b-561 domain containing 1 isoform 2 [Homo...
CYB561D1              0.044   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.042   cytochrome b-561 domain containing 1 isoform 3 [Hom...
CYBRD1                0.038   cytochrome b reductase 1 isoform 2 
CYB561D2              0.035   cytochrome b-561 domain containing 2 
SELI                  0.017   selenoprotein I 
POMT2                 0.010   protein-O-mannosyltransferase 2 
SLC9A5                0.006   solute carrier family 9 (sodium/hydrogen exchanger), ...
CCR4                  0.006   chemokine (C-C motif) receptor 4 
STT3B                 0.006   source of immunodominant MHC-associated peptides [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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