Guide to the Human Genome
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Name: FAM69B Sequence: fasta or formatted (431aa) NCBI GI: 224922839
Description:

hypothetical protein LOC138311

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         35           3
 C cysteine            4.2         18           1
 D aspartate           4.2         18           1
 E glutamate           5.1         22           2
 F phenylalanine       3.2         14           1
 G glycine             7.0         30           1
 H histidine           2.8         12           2
 I isoleucine          2.6         11           2
 K lysine              4.4         19           2
 L leucine            15.8         68           4
 M methionine          1.6          7           1
 N asparagine          1.6          7           1
 P proline             4.6         20           2
 Q glutamine           4.4         19           2
 R arginine            7.9         34           2
 S serine              6.0         26           2
 T threonine           4.9         21           2
 V valine              6.0         26           2
 W tryptophan          2.3         10           1
 Y tyrosine            3.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC138311 
FAM69A                0.474   family with sequence similarity 69, member A 
C18orf51              0.073   hypothetical protein LOC125704 
SGK196                0.010   protein kinase-like protein SgK196 
MEGF10                0.008   multiple EGF-like-domains 10 
LOC100133889          0.006   PREDICTED: hypothetical protein 
MAPK15                0.006   mitogen-activated protein kinase 15 
FAM89B                0.006   family with sequence similarity 89, member B isoform...
NUP155                0.006   nucleoporin 155kDa isoform 2 
NUP155                0.006   nucleoporin 155kDa isoform 1 
MUC2                  0.005   mucin 2 precursor 
LOC100294420          0.005   PREDICTED: similar to mucin 2 
DTX3                  0.005   deltex homolog 3 
CYB561D2              0.005   cytochrome b-561 domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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