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Search of human proteins with 58761510
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58761510 ischemia/reperfusion inducible protein [Homo
sapiens]
(279 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58761510 ischemia/reperfusion inducible protein [Homo sapiens] 551 e-157
gi|223634006 hypothetical protein LOC441869 [Homo sapiens] 38 0.009
gi|24497554 homeobox A13 [Homo sapiens] 35 0.073
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom... 35 0.073
gi|205277423 immunoglobulin superfamily, member 9 isoform b [Hom... 35 0.073
gi|16753221 cadherin 22 precursor [Homo sapiens] 35 0.073
gi|7657154 hairy/enhancer-of-split related with YRPW motif-like ... 34 0.12
gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens] 34 0.16
gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo sap... 34 0.16
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 33 0.28
gi|169211520 PREDICTED: hypothetical protein [Homo sapiens] 33 0.36
gi|91208435 elongation protein 4 homolog [Homo sapiens] 33 0.36
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 32 0.47
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 32 0.47
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 32 0.47
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 32 0.47
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 32 0.47
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 32 0.47
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 32 0.47
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 32 0.47
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 32 0.47
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 32 0.47
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 32 0.80
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens] 31 1.1
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 31 1.1
gi|18702331 OTU domain containing 7A [Homo sapiens] 31 1.1
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 31 1.1
gi|38455394 DNA-directed DNA polymerase epsilon 4 [Homo sapiens] 31 1.4
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 31 1.4
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 31 1.4
>gi|58761510 ischemia/reperfusion inducible protein [Homo sapiens]
Length = 279
Score = 551 bits (1419), Expect = e-157
Identities = 279/279 (100%), Positives = 279/279 (100%)
Query: 1 MSPARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAAS 60
MSPARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAAS
Sbjct: 1 MSPARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAAS 60
Query: 61 PERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAV 120
PERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAV
Sbjct: 61 PERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAV 120
Query: 121 CLGRVADVYRYCRVRVPEGLLKDLLPGPVTLVMERSEELNKDLNPFTPLVGIRIPDHAFM 180
CLGRVADVYRYCRVRVPEGLLKDLLPGPVTLVMERSEELNKDLNPFTPLVGIRIPDHAFM
Sbjct: 121 CLGRVADVYRYCRVRVPEGLLKDLLPGPVTLVMERSEELNKDLNPFTPLVGIRIPDHAFM 180
Query: 181 QDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTV 240
QDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTV
Sbjct: 181 QDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTV 240
Query: 241 VDLSVPGKFGIIRPGCALESTTAILQQKYGLLPSHASYL 279
VDLSVPGKFGIIRPGCALESTTAILQQKYGLLPSHASYL
Sbjct: 241 VDLSVPGKFGIIRPGCALESTTAILQQKYGLLPSHASYL 279
>gi|223634006 hypothetical protein LOC441869 [Homo sapiens]
Length = 399
Score = 38.1 bits (87), Expect = 0.009
Identities = 40/120 (33%), Positives = 49/120 (40%), Gaps = 16/120 (13%)
Query: 25 AGSRSGRLFRPPSPAPAAP----GARLLRLPGSGAVQAASPERAGWTEALRAA----VAE 76
A +RSG P A A ARLL PG G A + + GWT A AA +A
Sbjct: 133 AAARSGTGLTPLHWAAALGHTLLAARLLEAPGPGPAAAEAEDARGWTAAHWAAAGGRLAV 192
Query: 77 LRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKP--------LAVCLGRVADV 128
L A D +A AA AALR + R +A+ LA LGR D+
Sbjct: 193 LELLAAGGAGLDGALLVAAAAGRGAALRFLLARGARVDARDGAGATALGLAAALGRSQDI 252
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 35.0 bits (79), Expect = 0.073
Identities = 38/132 (28%), Positives = 48/132 (36%), Gaps = 13/132 (9%)
Query: 3 PARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLL--RLPGSGAVQAAS 60
PA G +VAA+ + A ++ L PAP APGA PG AA+
Sbjct: 61 PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMA--HPAPLAPGAASAYSSAPGEAPPSAAA 118
Query: 61 PERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAV 120
A A AA A G A P C + CSAA +S + P A+
Sbjct: 119 AAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQC-SPCSAA--------AQSSSGPAAL 169
Query: 121 CLGRVADVYRYC 132
G Y C
Sbjct: 170 PYGYFGSGYYPC 181
>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
sapiens]
Length = 1179
Score = 35.0 bits (79), Expect = 0.073
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 20 LSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPER 63
L+ +G S RPPS AP+A G+ L PG + A+ PER
Sbjct: 1021 LTSQSSGRGSASFLRPPSTAPSAGGSYLSPAPGDTSSWASGPER 1064
>gi|205277423 immunoglobulin superfamily, member 9 isoform b [Homo
sapiens]
Length = 1163
Score = 35.0 bits (79), Expect = 0.073
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 20 LSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPER 63
L+ +G S RPPS AP+A G+ L PG + A+ PER
Sbjct: 1005 LTSQSSGRGSASFLRPPSTAPSAGGSYLSPAPGDTSSWASGPER 1048
>gi|16753221 cadherin 22 precursor [Homo sapiens]
Length = 828
Score = 35.0 bits (79), Expect = 0.073
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 1 MSPARRCRGMRAAVAASVGLSE----GPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAV 56
M P RG+RA VA S L P + GRL+ +P+P+APGAR G+G V
Sbjct: 1 MRPRPEGRGLRAGVALSPALLLLLLLPPPPTLLGRLWAAGTPSPSAPGARQDGALGAGRV 60
Query: 57 Q 57
+
Sbjct: 61 K 61
>gi|7657154 hairy/enhancer-of-split related with YRPW motif-like
[Homo sapiens]
Length = 328
Score = 34.3 bits (77), Expect = 0.12
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 2 SPARRCRGMRAAVAASVGLSEGPAGSRSGR-LFRPPSPAPAAPGARLLRLPG-SGAVQAA 59
+P RR G+ +V S G + +R R L RP +P P AP +R R + +Q++
Sbjct: 220 APLRRATGIILPARRNVLPSRGASSTRRARPLERPATPVPVAPSSRAARSSHIAPLLQSS 279
Query: 60 SPERAGWTEALRAAVAELRAGAVVAVPT 87
SP G T + A VAVPT
Sbjct: 280 SPTPPGPT----------GSAAYVAVPT 297
>gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens]
Length = 1180
Score = 33.9 bits (76), Expect = 0.16
Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 16 ASVGLSEGPA--GSRSGRLFRPP------SPAPAAPGARLLRLPGSGAVQAASPERAGWT 67
A+V S G A SR +FR P SP A PGA + R PG+ ++ A
Sbjct: 728 AAVYRSPGAAVYRSREAAVFRSPEAAVYRSPEAAVPGAAVYRSPGAAVYRSRG---AAVY 784
Query: 68 EALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYR 108
+ AAV R AV P +Y AA + AVYR
Sbjct: 785 RSRGAAVYRSRGAAVYRSPGAAVYRSREAAVFRSPEAAVYR 825
>gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo
sapiens]
Length = 633
Score = 33.9 bits (76), Expect = 0.16
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 25 AGSRSGRLFRPPSPAPAAPGARLLRLPGSGA 55
AG SG ++PP PAP A A+L L GSGA
Sbjct: 172 AGRASGEQWQPPRPAPLAACAQLQLLDGSGA 202
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 33.1 bits (74), Expect = 0.28
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 8 RGMRAAVAASVGLSEGPAGSRSGRLF------RPPSPAPAAPGA 45
R ++ V+ S LS GP RS L RPP PAPAA GA
Sbjct: 196 RRLKPGVSVSSSLSPGPPLQRSSSLNETLRGRRPPGPAPAAAGA 239
>gi|169211520 PREDICTED: hypothetical protein [Homo sapiens]
Length = 312
Score = 32.7 bits (73), Expect = 0.36
Identities = 29/90 (32%), Positives = 33/90 (36%), Gaps = 13/90 (14%)
Query: 6 RCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPERAG 65
RC+ AA GL GP S PSP P LR P +Q +
Sbjct: 221 RCQRRVETFAAGAGLFVGPGAS--------PSPLPLCRSPSALRSP-PRRLQRPEKPLSQ 271
Query: 66 WTEAL----RAAVAELRAGAVVAVPTDTLY 91
W E L RA E RA A A P L+
Sbjct: 272 WGEGLGRARRAPRIETRASAATAAPLGCLF 301
>gi|91208435 elongation protein 4 homolog [Homo sapiens]
Length = 424
Score = 32.7 bits (73), Expect = 0.36
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 189 GPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQ---IGDGQSPECRLGSTVVDLSV 245
G +A ++ + + AS NV FQ P+ S+ D G G P R G +V +
Sbjct: 8 GSVAASTGSAVATASKSNVTSFQRRGPRASVTNDSGPRLVSIAGTRPSVRNGQLLVSTGL 67
Query: 246 PGKFGIIRPGCALESTTAILQQKYGL 271
P ++ G A+ + I + KY +
Sbjct: 68 PALDQLLGGGLAVGTVLLIEEDKYNI 93
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 32.3 bits (72), Expect = 0.47
Identities = 29/75 (38%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 3 PARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPE 62
P R RG VA L E R G+L + P P PA PG R PG+ A Q E
Sbjct: 141 PLWRIRGWETTVAR---LPE----PRVGKLGKGPPPRPAPPGTRC--CPGARAAQLLR-E 190
Query: 63 RAGWTEALRAAVAEL 77
A + LRA A L
Sbjct: 191 AAAAAQGLRAPAARL 205
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 32.3 bits (72), Expect = 0.47
Identities = 29/75 (38%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 3 PARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPE 62
P R RG VA L E R G+L + P P PA PG R PG+ A Q E
Sbjct: 141 PLWRIRGWETTVAR---LPE----PRVGKLGKGPPPRPAPPGTRC--CPGARAAQLLR-E 190
Query: 63 RAGWTEALRAAVAEL 77
A + LRA A L
Sbjct: 191 AAAAAQGLRAPAARL 205
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 32.3 bits (72), Expect = 0.47
Identities = 29/75 (38%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 3 PARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPE 62
P R RG VA L E R G+L + P P PA PG R PG+ A Q E
Sbjct: 141 PLWRIRGWETTVAR---LPE----PRVGKLGKGPPPRPAPPGTRC--CPGARAAQLLR-E 190
Query: 63 RAGWTEALRAAVAEL 77
A + LRA A L
Sbjct: 191 AAAAAQGLRAPAARL 205
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 32.3 bits (72), Expect = 0.47
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 35 PPSPAPAAPGARLLRLPGSGAVQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLA 94
PP P P AP + + PGS + A SP G L + E V V + L L
Sbjct: 656 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG----LESLSPEFFTSVVQGVLSSLLGSLG 711
Query: 95 CAASCSAALRA-VYRLKGRS 113
A S ++ A + RL G S
Sbjct: 712 ARAGSSESIAAFIQRLSGSS 731
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 32.3 bits (72), Expect = 0.47
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 35 PPSPAPAAPGARLLRLPGSGAVQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLA 94
PP P P AP + + PGS + A SP G L + E V V + L L
Sbjct: 656 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG----LESLSPEFFTSVVQGVLSSLLGSLG 711
Query: 95 CAASCSAALRA-VYRLKGRS 113
A S ++ A + RL G S
Sbjct: 712 ARAGSSESIAAFIQRLSGSS 731
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 32.3 bits (72), Expect = 0.47
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 35 PPSPAPAAPGARLLRLPGSGAVQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLA 94
PP P P AP + + PGS + A SP G L + E V V + L L
Sbjct: 656 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG----LESLSPEFFTSVVQGVLSSLLGSLG 711
Query: 95 CAASCSAALRA-VYRLKGRS 113
A S ++ A + RL G S
Sbjct: 712 ARAGSSESIAAFIQRLSGSS 731
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 32.3 bits (72), Expect = 0.47
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 35 PPSPAPAAPGARLLRLPGSGAVQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLA 94
PP P P AP + + PGS + A SP G L + E V V + L L
Sbjct: 662 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG----LESLSPEFFTSVVQGVLSSLLGSLG 717
Query: 95 CAASCSAALRA-VYRLKGRS 113
A S ++ A + RL G S
Sbjct: 718 ARAGSSESIAAFIQRLSGSS 737
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 32.3 bits (72), Expect = 0.47
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 14 VAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPERAGWTEALRAA 73
+AA + +SE SR P P PA P PG GA +A+P G A A
Sbjct: 1892 IAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP--VGALAAAGAN 1949
Query: 74 VAELRAGAVVAVPTD 88
+++ AG+ + T+
Sbjct: 1950 YSQMPAGSFITAATN 1964
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 32.3 bits (72), Expect = 0.47
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 14 VAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPERAGWTEALRAA 73
+AA + +SE SR P P PA P PG GA +A+P G A A
Sbjct: 1858 IAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP--VGALAAAGAN 1915
Query: 74 VAELRAGAVVAVPTD 88
+++ AG+ + T+
Sbjct: 1916 YSQMPAGSFITAATN 1930
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 32.3 bits (72), Expect = 0.47
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 14 VAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPERAGWTEALRAA 73
+AA + +SE SR P P PA P PG GA +A+P G A A
Sbjct: 1951 IAARLQMSERSILSRLASKGTEPHPTPAYPPGPYATPPGYGAAFSAAP--VGALAAAGAN 2008
Query: 74 VAELRAGAVVAVPTD 88
+++ AG+ + T+
Sbjct: 2009 YSQMPAGSFITAATN 2023
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 31.6 bits (70), Expect = 0.80
Identities = 24/59 (40%), Positives = 24/59 (40%), Gaps = 9/59 (15%)
Query: 15 AASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPERAGWTEALRAA 73
AA L E P G RP S A R PG A AA RAG EA RAA
Sbjct: 1323 AARPRLEEAPGGQGRPEAGRPASEA---------RAPGLAAADAADAARAGGKEAPRAA 1372
>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
Length = 547
Score = 31.2 bits (69), Expect = 1.1
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 12 AAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPG------SGAVQAASPER 63
AA AAS+G GP +R P PA AAP + R G +++SPER
Sbjct: 86 AAAAASLGSLPGPGAARGPSPSSPTPPAAAAPAEQAPRAKGRPRRSPESHRRSSSPER 143
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 31.2 bits (69), Expect = 1.1
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 2 SPARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASP 61
SP +R AA+AA+ + A + + P A AAP P A A +P
Sbjct: 487 SPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAP 546
Query: 62 ERAGWTEALRAAVAELRAGAVVAVPT 87
A AVA A A A P+
Sbjct: 547 -----APAAAPAVAAAPAAAASAAPS 567
>gi|18702331 OTU domain containing 7A [Homo sapiens]
Length = 926
Score = 31.2 bits (69), Expect = 1.1
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 13/114 (11%)
Query: 20 LSEGPA-GSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASP------------ERAGW 66
L E P+ G +GR R + A+PG R SG V SP
Sbjct: 721 LKERPSPGPAAGRAARAAAGGTASPGGGARRASASGPVPGRSPPAPARQSVIHVQASGAR 780
Query: 67 TEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAV 120
EA AV LR A +L + + + +AALR V ++ + A P A+
Sbjct: 781 DEACAPAVGALRPCATYPQQNRSLSSQSYSPARAAALRTVNTVESLARAVPGAL 834
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 31.2 bits (69), Expect = 1.1
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 12/48 (25%)
Query: 35 PPSPAPAAPGARLLRLPGSGAVQAASPE------------RAGWTEAL 70
PP P P PG ++ R+PG G +Q+ E GWTE L
Sbjct: 596 PPFPGPRFPGNQIQRVPGFGGMQSMPMEVPMNAMQRPVRPGMGWTEDL 643
>gi|38455394 DNA-directed DNA polymerase epsilon 4 [Homo sapiens]
Length = 117
Score = 30.8 bits (68), Expect = 1.4
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 10 MRAAVAASVGL---SEGPAGSRSGRLFRPPSPAPAAPGARLLRLPGSGAVQAASPERAGW 66
M AA AA G EGPAG + +P +P + PGARL RLP V+A
Sbjct: 1 MAAAAAAGSGTPREEEGPAGEAAAS--QPQAPT-SVPGARLSRLP-LARVKALVKADPDV 56
Query: 67 TEALRAAVAELRAGAVVAVPTDTLYGLACA 96
T A + A+ L A + V T CA
Sbjct: 57 TLAGQEAIFILARAAELFVETIAKDAYCCA 86
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 32 LFRPPSPAPA-APGARLLRLPGSGAVQAASP 61
L RPP PAPA AP + LPG G + SP
Sbjct: 93 LCRPPGPAPAPAPASVTAELPGDGRMVQLSP 123
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 30.8 bits (68), Expect = 1.4
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 29 SGRLFRPPSP----APAAPGARLLRLP--GSGAVQAASPERAG-WTEALRAAVAELRAGA 81
S + +PP P APG +L +P G GA AA P +G W EA +A + R
Sbjct: 925 SSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAAAKPGTSGSWQEAGTSA-KDKRLST 983
Query: 82 VVAVPTDTLY----GLACAASCSAAL 103
+ A+P ++ G A AAS + AL
Sbjct: 984 MQALPLAPVFSEAEGTAPAASQAPAL 1009
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,514,546
Number of Sequences: 37866
Number of extensions: 569098
Number of successful extensions: 3183
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 3130
Number of HSP's gapped (non-prelim): 145
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.