Guide to the Human Genome
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Name: ELP4 Sequence: fasta or formatted (424aa) NCBI GI: 91208435
Description:

elongation protein 4 homolog

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         28           2
 C cysteine            1.9          8           2
 D aspartate           5.0         21           2
 E glutamate           5.2         22           2
 F phenylalanine       3.3         14           2
 G glycine             7.8         33           3
 H histidine           2.4         10           1
 I isoleucine          6.6         28           2
 K lysine              6.6         28           2
 L leucine            12.3         52           2
 M methionine          1.9          8           2
 N asparagine          4.5         19           2
 P proline             5.4         23           2
 Q glutamine           3.1         13           1
 R arginine            5.0         21           2
 S serine              8.7         37           3
 T threonine           5.2         22           2
 V valine              5.2         22           3
 W tryptophan          0.7          3           1
 Y tyrosine            2.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elongation protein 4 homolog 
ZSWIM5                0.012   zinc finger, SWIM domain containing 5 
ASPSCR1               0.011   alveolar soft part sarcoma chromosome region, candid...
YRDC                  0.010   ischemia/reperfusion inducible protein 
LOC652022             0.009   PREDICTED: similar to mindbomb homolog 2 
SRF                   0.009   serum response factor (c-fos serum response element-b...
DHCR24                0.007   24-dehydrocholesterol reductase precursor 
AHCTF1                0.006   transcription factor ELYS 
PBOV1                 0.006   prostate and breast cancer overexpressed 1 
RCOR1                 0.005   REST corepressor 1 
LRRN3                 0.005   leucine rich repeat neuronal 3 
LRRN3                 0.005   leucine rich repeat neuronal 3 
LRRN3                 0.005   leucine rich repeat neuronal 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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