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Search of human proteins with 58197552
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58197552 essential meiotic endonuclease 1 homolog 2 [Homo
sapiens]
(444 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58197552 essential meiotic endonuclease 1 homolog 2 [Homo sap... 904 0.0
gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo sap... 159 5e-39
gi|156151413 MUS81 endonuclease homolog [Homo sapiens] 38 0.021
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 37 0.036
gi|239756274 PREDICTED: hypothetical protein [Homo sapiens] 35 0.10
gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo ... 35 0.10
gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo ... 35 0.10
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 35 0.18
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 35 0.18
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 34 0.23
gi|217416343 fibrosin-like 1 [Homo sapiens] 34 0.23
gi|150418005 protein tyrosine phosphatase, non-receptor type 21 ... 33 0.68
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H... 32 1.2
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig... 32 1.2
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 32 1.5
gi|89242152 small nuclear RNA activating complex, polypeptide 3,... 32 1.5
gi|156416026 zinc finger protein 219 [Homo sapiens] 32 1.5
gi|156415998 zinc finger protein 219 [Homo sapiens] 32 1.5
gi|156415996 zinc finger protein 219 [Homo sapiens] 32 1.5
gi|42516576 glutaredoxin 5 [Homo sapiens] 31 2.0
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 31 2.0
gi|239745480 PREDICTED: hypothetical protein XP_002343504 [Homo ... 31 2.6
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens] 31 2.6
gi|19923191 minichromosome maintenance complex component 3 assoc... 31 2.6
gi|28875797 small protein rich in arginine and glycine [Homo sap... 30 3.4
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|169179422 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 30 3.4
gi|110681708 zinc finger protein 579 [Homo sapiens] 30 3.4
gi|146219841 PNMA-like 2 [Homo sapiens] 30 3.4
>gi|58197552 essential meiotic endonuclease 1 homolog 2 [Homo
sapiens]
Length = 444
Score = 904 bits (2337), Expect = 0.0
Identities = 444/444 (100%), Positives = 444/444 (100%)
Query: 1 MARVGPGRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAA 60
MARVGPGRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAA
Sbjct: 1 MARVGPGRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAA 60
Query: 61 AEALRLLRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRA 120
AEALRLLRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRA
Sbjct: 61 AEALRLLRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRA 120
Query: 121 SPDPCPRSLPPEVWAAGEQELLLLLEPEEFLQGVATLTQISGPTHWVPWISPETTARPHL 180
SPDPCPRSLPPEVWAAGEQELLLLLEPEEFLQGVATLTQISGPTHWVPWISPETTARPHL
Sbjct: 121 SPDPCPRSLPPEVWAAGEQELLLLLEPEEFLQGVATLTQISGPTHWVPWISPETTARPHL 180
Query: 181 AVIGLDAYLWYRSLSCPQQGWLGRGFRGGGLWQRPSSGRAGPMGSGEEWSPLLRSRQHVS 240
AVIGLDAYLWYRSLSCPQQGWLGRGFRGGGLWQRPSSGRAGPMGSGEEWSPLLRSRQHVS
Sbjct: 181 AVIGLDAYLWYRSLSCPQQGWLGRGFRGGGLWQRPSSGRAGPMGSGEEWSPLLRSRQHVS 240
Query: 241 RGTQQPESPKVAGAEVAVSWPEVEEVRACLSWALVLLQLWANLDVLLVASWQELSRHVCA 300
RGTQQPESPKVAGAEVAVSWPEVEEVRACLSWALVLLQLWANLDVLLVASWQELSRHVCA
Sbjct: 241 RGTQQPESPKVAGAEVAVSWPEVEEVRACLSWALVLLQLWANLDVLLVASWQELSRHVCA 300
Query: 301 VTKALAQYPLKCVMPRLKGGRITSRQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRR 360
VTKALAQYPLKCVMPRLKGGRITSRQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRR
Sbjct: 301 VTKALAQYPLKCVMPRLKGGRITSRQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRR 360
Query: 361 QIRQFSRVSPAVADAVVTAFPSPRLLQQALEACSTERERMGLLADLPVPPSEGGRPRRVG 420
QIRQFSRVSPAVADAVVTAFPSPRLLQQALEACSTERERMGLLADLPVPPSEGGRPRRVG
Sbjct: 361 QIRQFSRVSPAVADAVVTAFPSPRLLQQALEACSTERERMGLLADLPVPPSEGGRPRRVG 420
Query: 421 PDLSRRICLFLTTANPDLLLDLGS 444
PDLSRRICLFLTTANPDLLLDLGS
Sbjct: 421 PDLSRRICLFLTTANPDLLLDLGS 444
>gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo
sapiens]
Length = 570
Score = 159 bits (402), Expect = 5e-39
Identities = 131/398 (32%), Positives = 185/398 (46%), Gaps = 72/398 (18%)
Query: 56 ERRAAAEALRLL--RPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPAR 113
ER+ AA R+ RPE+ LK + V +D +L+ G L+ AL+ + C C IE Q
Sbjct: 230 ERKNAALVTRMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPC 289
Query: 114 SLRWTRASPDPCPRSLPPEVWAAGEQELLLLLEPEEFLQGVATLTQ------ISGPTHWV 167
S+ W R + R E W E +L+LL E F+ + Q + G
Sbjct: 290 SVTWRRRAGPSEDR----EDWVE-EPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQ 344
Query: 168 PWISPET--TARPHLAVIGLDAYLWYRSLSCPQQGWLGRGFRGGGLWQRPSSGRAGPMGS 225
+++ T TA L+++ +D + + + P++G G
Sbjct: 345 GFVTDITAKTAGKALSLVIVDQEKCFSAQNPPRRGKQGA--------------------- 383
Query: 226 GEEWSPLLRSRQHVSRGTQQPESPKVAGAEVAVSWPEVEEVRACLSWALVLLQLWANLDV 285
++Q + +QPE A VS + EE ALV LQL
Sbjct: 384 ---------NKQTKKQQQRQPE----ASIGSMVSRVDAEE-------ALVDLQLHTEAQA 423
Query: 286 LLVASWQELSRHVCAVTKALAQYPLKCVMPRLKGGRITSRQYRESQAFSFCTAGRWAAGE 345
+V SW+EL+ CA TKA+A+ P K + R+ FSFC WA G
Sbjct: 424 QIVQSWKELADFTCAFTKAVAEAPFK--------------KLRDETTFSFCLESDWAGGV 469
Query: 346 PVARDGAGLQAAWRRQIRQFSRVSPAVADAVVTAFPSPRLLQQALEACSTERERMGLLAD 405
V G GL WRRQI+Q +RVS +A AVV A+PSP+LL QA + C +++ER LLAD
Sbjct: 470 KVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLAD 529
Query: 406 LPVPPSEG--GRPRRVGPDLSRRICLFLTTANPDLLLD 441
+ V EG RR+GP+LSRRI L +TT P L LD
Sbjct: 530 IQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLD 567
>gi|156151413 MUS81 endonuclease homolog [Homo sapiens]
Length = 551
Score = 37.7 bits (86), Expect = 0.021
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 354 LQAAWRRQIRQFSRVSPAVADAVVTAFPSPRLLQQALEACSTERERMGLLADLPVPPSEG 413
++ + RQ+ Q VS A A+V + +P L A +AC+T +E+ LL+ + G
Sbjct: 471 VREVFARQLMQVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKC----G 526
Query: 414 GRPRRVGPDLSRRICLFLTTANP 436
R +GP LSR + + P
Sbjct: 527 RLQRNLGPALSRTLSQLYCSYGP 549
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 37.0 bits (84), Expect = 0.036
Identities = 44/144 (30%), Positives = 55/144 (38%), Gaps = 19/144 (13%)
Query: 6 PGRAGVSCQGRGRGRGGSGQRRPPTWEISDSDA--EDSAG--------SEAAARARDPAG 55
P + S G + R G G PP + D A E+++G EA A R G
Sbjct: 195 PAKGSSSRDGPAKERAGRGGEPPPLFGKKDPRARGEEASGPRGVVDLTQEARAEGRQDRG 254
Query: 56 ERRAAAEALRLLRPEQVLKRLAVCVDTAILEDAGA-DVLMEALEAL----GCECRIEPQR 110
R A E L E K A+ + + GA DV + AL A G +
Sbjct: 255 PPRLA-ERLSPFLAESKTKNAALQPSVLTMCNGGAGDVGLPALVAEAGRGGAKEAARQDE 313
Query: 111 PARSLRWTRA---SPDPCPRSLPP 131
AR LR T P PCP LPP
Sbjct: 314 GARLLRRTETLLPGPRPCPSPLPP 337
>gi|239756274 PREDICTED: hypothetical protein [Homo sapiens]
Length = 775
Score = 35.4 bits (80), Expect = 0.10
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 2 ARVGPGRAGVSCQ-GRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAA 60
A V P GV Q RG G G+G R E+ +DAE+ S AA AR P G+ A
Sbjct: 500 ATVVPDSEGVGAQYRRGDGPEGAGSGRDDRLEVLKADAEE---SPAAGLARPPTGQYAAL 556
Query: 61 AEALRLLRPE 70
+ L L+ E
Sbjct: 557 VDELLQLQLE 566
>gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo
sapiens]
Length = 765
Score = 35.4 bits (80), Expect = 0.10
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 2 ARVGPGRAGVSCQ-GRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAA 60
A V P GV Q RG G G+G R E+ +DAE+ S AA AR P G+ A
Sbjct: 490 ATVVPDSEGVGAQYRRGDGPEGAGSGRDDRLEVLKADAEE---SPAAGLARPPTGQYAAL 546
Query: 61 AEALRLLRPE 70
+ L L+ E
Sbjct: 547 VDELLQLQLE 556
>gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo
sapiens]
Length = 765
Score = 35.4 bits (80), Expect = 0.10
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 2 ARVGPGRAGVSCQ-GRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAA 60
A V P GV Q RG G G+G R E+ +DAE+ S AA AR P G+ A
Sbjct: 490 ATVVPDSEGVGAQYRRGDGPEGAGSGRDDRLEVLKADAEE---SPAAGLARPPTGQYAAL 546
Query: 61 AEALRLLRPE 70
+ L L+ E
Sbjct: 547 VDELLQLQLE 556
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 34.7 bits (78), Expect = 0.18
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
Query: 17 GRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAEALRLLRPEQVLKRL 76
G+G GG G+ W+ ++ E + AAA DPA E A LR RP +++ R
Sbjct: 175 GKGEGG-GKESAVLWKGAEGGGEKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRP 233
Query: 77 AV---------CVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRASPDPCPR 127
A+ C GA + E +A G + AR L W R P PCPR
Sbjct: 234 ALPSAPSPRIRCFLAPGRSRVGAALTEE--QAAG-------EAAARGL-W-RRKPAPCPR 282
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 34.7 bits (78), Expect = 0.18
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
Query: 17 GRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAEALRLLRPEQVLKRL 76
G+G GG G+ W+ ++ E + AAA DPA E A LR RP +++ R
Sbjct: 175 GKGEGG-GKESAVLWKGAEGGGEKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRP 233
Query: 77 AV---------CVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRASPDPCPR 127
A+ C GA + E +A G + AR L W R P PCPR
Sbjct: 234 ALPSAPSPRIRCFLAPGRSRVGAALTEE--QAAG-------EAAARGL-W-RRKPAPCPR 282
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 34.3 bits (77), Expect = 0.23
Identities = 41/137 (29%), Positives = 54/137 (39%), Gaps = 27/137 (19%)
Query: 3 RVGPGRAGVSCQGRGRGRGGSGQRRPP--TWEISDSDAEDSAGSEAAARARDPAGERRAA 60
R GP AG C+ GRGR + +R P T S + E + G+ AA+ AG R +
Sbjct: 97 RAGP--AGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAAS----SAGTR--S 148
Query: 61 AEALRLLRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRA 120
A RL P C T++ AG+ L A P+ P+ S RW
Sbjct: 149 VPARRLPPP---------CGGTSL--GAGSRALRRPGSA------ALPRSPSSSRRWAAM 191
Query: 121 SPDPCPRSLPPEVWAAG 137
PR P W G
Sbjct: 192 PGPGAPRPGAPGTWPVG 208
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 34.3 bits (77), Expect = 0.23
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 15/138 (10%)
Query: 2 ARVGPGRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGSE-AAARARDPAGERRAA 60
A+V P R + + RGR R + R + D + E S G E A R P R A
Sbjct: 3 AKVRPSRRSRAQRDRGRRREAARDARAQSPSSGD-EPEPSPGKENAGLRGAPP----RGA 57
Query: 61 AEALRLLRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTR- 119
A A R RP + +R + + ++ D A LEAL + ++P R +W R
Sbjct: 58 APAPRTARPPRRRRRESSSQEEEVI-DGFAIASFSTLEALEKDMALKPHE--RKEKWERR 114
Query: 120 -----ASPDPCPRSLPPE 132
+ CP + P E
Sbjct: 115 LIKKPRESETCPPAEPSE 132
>gi|150418005 protein tyrosine phosphatase, non-receptor type 21
[Homo sapiens]
Length = 1174
Score = 32.7 bits (73), Expect = 0.68
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 370 PAVADAVVTAFPSPRLLQQALEACSTERER-MGLLADLPVPPSEGGRPRRVGPDLSRRIC 428
PA VV A P L L+A M P PP RP PDLSR
Sbjct: 527 PAERRPVVGAVSVPELTNAQLQAQDYPSPNIMRTQVYRPPPPYPPPRPANSTPDLSRH-- 584
Query: 429 LFLTTANPDLL 439
L+++++NPDL+
Sbjct: 585 LYISSSNPDLI 595
>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
sapiens]
Length = 340
Score = 32.0 bits (71), Expect = 1.2
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 7 GRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAEA 63
G G + + G G GG+G E +SD E AA PAGE A EA
Sbjct: 145 GEGGSASEAEGAGEGGAGDELRVAEEARESD-------EGAAGDTGPAGEAEAVGEA 194
>gi|169216749 PREDICTED: similar to Putative paraneoplastic
antigen-like protein 6B-like protein [Homo sapiens]
Length = 340
Score = 32.0 bits (71), Expect = 1.2
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 7 GRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAEA 63
G G + + G G GG+G E +SD E AA PAGE A EA
Sbjct: 145 GEGGSASEAEGAGEGGAGDELRVAEEARESD-------EGAAGDTGPAGEAEAVGEA 194
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 31.6 bits (70), Expect = 1.5
Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 38/124 (30%)
Query: 14 QGRGRGRGGSGQRRP--------------------PTWEISDSDAE----------DSAG 43
QG GR R G RP P W + +SD E D+AG
Sbjct: 78 QGAGRRRRAGGPPRPMSEPGAGAGSSLLDVAEPGGPGW-LPESDCETVTCCLFSERDAAG 136
Query: 44 SEA------AARARDPAGERRAAAEALRLLRPEQVLKRLAVCVDTAILEDAGADVLMEAL 97
+ A A +PAG R+ RLL EQ LK + + L++ D L+EA+
Sbjct: 137 APRDASDPLAGAALEPAGGGRSREARSRLLLLEQELKTVTYSL-LKRLKERSLDTLLEAV 195
Query: 98 EALG 101
E+ G
Sbjct: 196 ESRG 199
>gi|89242152 small nuclear RNA activating complex, polypeptide 3,
50kDa [Homo sapiens]
Length = 411
Score = 31.6 bits (70), Expect = 1.5
Identities = 24/56 (42%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 7 GRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAE 62
G G +GR RG G R PP + S A DS E AA ARD AAAE
Sbjct: 45 GAFGELWRGRLRGAGDLSLREPPASALPGSQAADS-DREDAAVARDLDCSLEAAAE 99
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 31.6 bits (70), Expect = 1.5
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 14/115 (12%)
Query: 17 GRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAEALRLLRPEQVLKRL 76
GR R G + P E A A S +A R G+ R +AE R L +L R
Sbjct: 135 GRARSSGGMQATPATE---GLARPQAPSSSAFRCPYCKGKFRTSAERERHLH---ILHRP 188
Query: 77 AVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRASPDPCPRSLPP 131
C + ++L +L A G P R L T A+P P P+ PP
Sbjct: 189 WKCGLCSFGSSQEEELLHHSLTAHGA--------PERPLAATSAAPPPQPQPQPP 235
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 31.6 bits (70), Expect = 1.5
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 14/115 (12%)
Query: 17 GRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAEALRLLRPEQVLKRL 76
GR R G + P E A A S +A R G+ R +AE R L +L R
Sbjct: 135 GRARSSGGMQATPATE---GLARPQAPSSSAFRCPYCKGKFRTSAERERHLH---ILHRP 188
Query: 77 AVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRASPDPCPRSLPP 131
C + ++L +L A G P R L T A+P P P+ PP
Sbjct: 189 WKCGLCSFGSSQEEELLHHSLTAHGA--------PERPLAATSAAPPPQPQPQPP 235
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 31.6 bits (70), Expect = 1.5
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 14/115 (12%)
Query: 17 GRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAEALRLLRPEQVLKRL 76
GR R G + P E A A S +A R G+ R +AE R L +L R
Sbjct: 135 GRARSSGGMQATPATE---GLARPQAPSSSAFRCPYCKGKFRTSAERERHLH---ILHRP 188
Query: 77 AVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRASPDPCPRSLPP 131
C + ++L +L A G P R L T A+P P P+ PP
Sbjct: 189 WKCGLCSFGSSQEEELLHHSLTAHGA--------PERPLAATSAAPPPQPQPQPP 235
>gi|42516576 glutaredoxin 5 [Homo sapiens]
Length = 157
Score = 31.2 bits (69), Expect = 2.0
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 203 GRGFRGGGLW---QRPSSGRAGPMGSGEEWSPLLRSRQHVSRGTQQPESPKVAGAEVAVS 259
GRG GGGLW R + AG GS E+ L++ + V PE P+ + V
Sbjct: 16 GRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQ 75
Query: 260 WPEVEEVR 267
+ VR
Sbjct: 76 ILRLHGVR 83
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 31.2 bits (69), Expect = 2.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 7 GRAGVSCQGRGRGRGGSGQRRPPT 30
GR G +GRGRGRGG G R T
Sbjct: 1698 GRGGGGTRGRGRGRGGRGASRGAT 1721
>gi|239745480 PREDICTED: hypothetical protein XP_002343504 [Homo
sapiens]
Length = 243
Score = 30.8 bits (68), Expect = 2.6
Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 5 GPGRAGVS----CQGRGR-----GRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAG 55
G GRA S C GR R RGG G W + S A AG + A + + PAG
Sbjct: 155 GAGRALGSGRPPCSGRRRLSVPAARGGEGATSRH-WAPAASPAAGGAGKKDARKRKAPAG 213
Query: 56 ERRAAAEALRLLRPEQVL 73
R A A L EQ+L
Sbjct: 214 PRVARGCAPWFLAREQLL 231
>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 30.8 bits (68), Expect = 2.6
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 15 GRGRGRGGSGQRRPPTWEISDSDAEDSAGSEAAARARDPAGERRAAAEALR 65
G+ G G G+R P + + S GS A R AG+R A +ALR
Sbjct: 18 GQAWGSAGRGRRGPAPRGQTGTQGVGSGGSGAGVRPEPCAGQRPAGGKALR 68
>gi|19923191 minichromosome maintenance complex component 3 associated
protein [Homo sapiens]
Length = 1980
Score = 30.8 bits (68), Expect = 2.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 101 GCECRIEPQRPARSLRWTRASPDPCPRSLPP 131
G EC +EP P SL + +P P P LPP
Sbjct: 1015 GEECGVEPDAPLSSLPQSLPAPAPSPVPLPP 1045
>gi|28875797 small protein rich in arginine and glycine [Homo
sapiens]
Length = 248
Score = 30.4 bits (67), Expect = 3.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 4 VGPGRAGVSCQGRGRGRGGSGQRRP 28
+G GR G +GRGRGRG RP
Sbjct: 185 IGRGRGGFGGRGRGRGRGRGALARP 209
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 30.4 bits (67), Expect = 3.4
Identities = 72/283 (25%), Positives = 93/283 (32%), Gaps = 65/283 (22%)
Query: 13 CQGRGRGRGGSGQRRPP--TWEISDSDAEDSAGSEAAARARDPAGERRAAAEALRLLRPE 70
CQG G GGSG PP W + G A ARA+ E+RA + L P
Sbjct: 199 CQGLGSSWGGSGTPPPPRALW--------NRHGGAAGARAQVRGSEKRACPGS--TLPPS 248
Query: 71 QVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRASP-DPCPRSL 129
V LA CV T G V + A P S RA P P PR
Sbjct: 249 SV---LAGCVGTRARGHGG--VQRQRFSAPSSHSTGARTLPTPS----RARPGKPAPRGS 299
Query: 130 PPEV------WAAGEQELLLLLEPEEFLQGVAT--------------LTQISGPTHWVPW 169
P +G +L+ V T + + G H+ P
Sbjct: 300 APPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPL 359
Query: 170 ISPETTARPHL-AVIGLDAYLWYRSLSCPQ------------------QGWLGRGFRGGG 210
SP + P +V L LSCPQ W G+ G G
Sbjct: 360 SSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCG 419
Query: 211 LWQRPSSGR---AGPMGSGEEW-SPLLRSRQHVSRGTQQPESP 249
+P +GR G G+G W + L + S ++ ESP
Sbjct: 420 GGSQPFAGRRAERGKRGAGVPWRTQTLSLLRRCSGALRELESP 462
>gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]
Length = 645
Score = 30.4 bits (67), Expect = 3.4
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 155 ATLTQISGPTHWVPWISPETTARPHLAVIG-----LDAYLWYRSLSCPQQGWLGRGFRGG 209
A L P+ W W+S +P+ + G L W L+C G+G G
Sbjct: 425 AELPASDSPSGWGTWLSTPPPYKPNKGLKGPTRRSLGLLEWRSRLACSNLLRTGQGCSGQ 484
Query: 210 GLWQRPSSGRAGPMGSGEEWSPL-LRSRQHVSRGTQQ 245
L + S+ G+G++W + L +R + G +Q
Sbjct: 485 ALLRCGSNRTLRGGGTGQKWPGVPLGARTGLGAGVRQ 521
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 30.4 bits (67), Expect = 3.4
Identities = 37/143 (25%), Positives = 54/143 (37%), Gaps = 28/143 (19%)
Query: 6 PGRAG---VSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGSEA-AARARDPAGERRAAA 61
PGRA S G GR G+ P + S + A + S A A+ +R +G +A
Sbjct: 51 PGRASPAQASPAGTPPGRASPGRASPA--QASPAQASPARASPALASLSRSSSGRSSSAR 108
Query: 62 EALRLLRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPARSLRWTRAS 121
A P +V A V + + PARS TRA+
Sbjct: 109 SASVTTSPTRVYLVRATPVGAVPIRSS----------------------PARSAPATRAT 146
Query: 122 PDPCPRSLPPEVWAAGEQELLLL 144
+ SLP W G+++L L+
Sbjct: 147 RESPGTSLPKFTWREGQKQLPLI 169
>gi|110681708 zinc finger protein 579 [Homo sapiens]
Length = 562
Score = 30.4 bits (67), Expect = 3.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 5 GPGRAGVSCQGRGRGRGGSGQRRPP 29
G GR +GRGRGRGG+G R P
Sbjct: 19 GRGRGRGRGRGRGRGRGGAGAPRAP 43
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 30.4 bits (67), Expect = 3.4
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 15 GRGRGRGGSGQRRPPTWEISDSDA------EDSAGSEAAARARDPAGERRAAAEALR 65
GRGRGRG + +++ + + DA + SAG+ A ARA + G+ ++A R
Sbjct: 564 GRGRGRGVTPEKKAGSRGSAQDDAAGSRKKKGSAGAGAHARAGEAKGQAPTGSKAAR 620
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,379,186
Number of Sequences: 37866
Number of extensions: 1052643
Number of successful extensions: 4363
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 4299
Number of HSP's gapped (non-prelim): 102
length of query: 444
length of database: 18,247,518
effective HSP length: 105
effective length of query: 339
effective length of database: 14,271,588
effective search space: 4838068332
effective search space used: 4838068332
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.