Search of human proteins with 57863285

Search of human proteins with 57863285

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57863285 poliovirus receptor related immunoglobulin domain
containing [Homo sapiens]
         (326 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57863285 poliovirus receptor related immunoglobulin domain co...   683   0.0  
gi|163965366 nascent polypeptide-associated complex alpha subuni...    39   0.006
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     37   0.024
gi|20162554 Kruppel-like factor 14 [Homo sapiens]                      36   0.053
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]            35   0.091
gi|169214023 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi...    35   0.12 
gi|169214468 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|7657154 hairy/enhancer-of-split related with YRPW motif-like ...    34   0.15 
gi|112421108 capicua homolog [Homo sapiens]                            34   0.15 
gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]            33   0.26 
gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s...    33   0.26 
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    33   0.26 
gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]     33   0.34 
gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]     33   0.34 
gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]     33   0.34 
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]    33   0.34 
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]    33   0.34 
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]      33   0.34 
gi|119703742 vitelliform macular dystrophy 2-like 1 [Homo sapiens]     33   0.45 
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]    33   0.45 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    32   0.59 
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]            32   0.59 
gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]            32   0.59 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    32   0.59 
gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo ...    32   0.59 
gi|4501897 activin A receptor, type IIA precursor [Homo sapiens]       32   0.59 
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          32   0.59 
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          32   0.59 
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          32   0.59 

>gi|57863285 poliovirus receptor related immunoglobulin domain
           containing [Homo sapiens]
          Length = 326

 Score =  683 bits (1763), Expect = 0.0
 Identities = 326/326 (100%), Positives = 326/326 (100%)

Query: 1   MRTEAQVPALQPPEPGLEGAMGHRTLVLPWVLLTLCVTAGTPEVWVQVRMEATELSSFTI 60
           MRTEAQVPALQPPEPGLEGAMGHRTLVLPWVLLTLCVTAGTPEVWVQVRMEATELSSFTI
Sbjct: 1   MRTEAQVPALQPPEPGLEGAMGHRTLVLPWVLLTLCVTAGTPEVWVQVRMEATELSSFTI 60

Query: 61  RCGFLGSGSISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSISLILEG 120
           RCGFLGSGSISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSISLILEG
Sbjct: 61  RCGFLGSGSISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSISLILEG 120

Query: 121 SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPPTPAPILRADLAGILGVSG 180
           SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPPTPAPILRADLAGILGVSG
Sbjct: 121 SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPPTPAPILRADLAGILGVSG 180

Query: 181 VLLFGCVYLLHLLRRHKHRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSC 240
           VLLFGCVYLLHLLRRHKHRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSC
Sbjct: 181 VLLFGCVYLLHLLRRHKHRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSC 240

Query: 241 RPATLDTAHPHGGPSWWASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERP 300
           RPATLDTAHPHGGPSWWASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERP
Sbjct: 241 RPATLDTAHPHGGPSWWASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERP 300

Query: 301 PHTGPGLTLFPDPRGPRAMEGPLGVR 326
           PHTGPGLTLFPDPRGPRAMEGPLGVR
Sbjct: 301 PHTGPGLTLFPDPRGPRAMEGPLGVR 326


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 46/194 (23%), Positives = 67/194 (34%), Gaps = 39/194 (20%)

Query: 140  PEGSWEACGSLPPSSDPGLSAPP------TPAPILRADLAGILGVSGVLLFGCVYLLHLL 193
            P+G+     + PPS   GL+ PP      TPA    +   G+                  
Sbjct: 1145 PKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA----------------- 1187

Query: 194  RRHKHRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHPHGG 253
                  P+P+  P+  +   P  +    + + + A   P AT         L T  P G 
Sbjct: 1188 -----TPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT--PPSPKGGLATPSPKGA 1240

Query: 254  PSWWASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERPPHTG---PGLTLF 310
            P+  A+ P      P  P      P P   +  S++ GL       PPH G   P +   
Sbjct: 1241 PTTPAATPPSPKGGPATPPP-KGAPTPPAATPPSLKGGL-----ATPPHKGAPNPAVVTP 1294

Query: 311  PDPRGPRAMEGPLG 324
            P P+G  A   P G
Sbjct: 1295 PSPKGGPATSPPKG 1308



 Score = 28.5 bits (62), Expect = 8.5
 Identities = 48/197 (24%), Positives = 68/197 (34%), Gaps = 45/197 (22%)

Query: 140  PEGSWEACGSLPPSSDPGLSAPP------TPAPILRADLAGILGVSGVLLFGCVYLLHLL 193
            P+G+     + PPS   GL+ PP      TPA    +   G+                  
Sbjct: 1099 PKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLA----------------- 1141

Query: 194  RRHKHRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHPHGG 253
                  P P+  P+  +   P  +    +   + A   P AT         L T  P G 
Sbjct: 1142 -----TPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAAT--PPSPKGGLATPSPKGA 1194

Query: 254  PSWWASLPTH-----AAHRPQG-PAAWASTPIPARGSFVSVENGLYAQAGERPPHTGPGL 307
            P+  A+ P       A   P+G P   A+TP   +G       GL   + +  P T P  
Sbjct: 1195 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG-------GLATPSPKGAP-TTPAA 1246

Query: 308  TLFPDPRGPRAMEGPLG 324
            T  P P+G  A   P G
Sbjct: 1247 TP-PSPKGGPATPPPKG 1262


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 42/132 (31%), Positives = 51/132 (38%), Gaps = 30/132 (22%)

Query: 198 HRPAPRLQPSR---TSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHPHGGP 254
           +R A R+QP R   T P  PRA   AP+ A+ AA   P  T      PA +  A P    
Sbjct: 93  YRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAA---PPPTPAPPPPPAPVAAAAP---- 145

Query: 255 SWWASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERPPHTGPGLTLFPDPR 314
                     A  P+  AA A+ P P+ G          AQ G R     P     P P 
Sbjct: 146 ----------ARAPRAAAAAATAP-PSPGP---------AQPGPRAQRAAPLAAPPPAPA 185

Query: 315 GPRAMEGPLGVR 326
            P A+  P G R
Sbjct: 186 APPAVAPPAGPR 197


>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
          Length = 323

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 79  GPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSISLILEGSGASSP--CANTTFCCKF 136
           G  GA G+ +   HPE  +    P+  A       +     G+G ++P   A + +    
Sbjct: 34  GAGGAAGSEVGAAHPESALPGPGPSGPASVPQLPQVPAPSPGAGGAAPHLLAASVWADLR 93

Query: 137 ASFPEGSWEACGSLPPSSDPGLSAP-PTPAPILRADLAGILGVSGV 181
            S  EGSWE  G  P +S  G S P P       ++LA   G + V
Sbjct: 94  GSSGEGSWENSGEAPRASS-GFSDPIPCSVQTPCSELAPASGAAAV 138


>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 35.0 bits (79), Expect = 0.091
 Identities = 44/157 (28%), Positives = 57/157 (36%), Gaps = 27/157 (17%)

Query: 142 GSWEACGSLPPSSDPGLSAPPTPAPILRADLAGILGVSGVLLFGCVYLLHLLRRHKHR-- 199
           G+W A  + PP   PGL+A     P+    + G   V+G+L  G    L +         
Sbjct: 2   GAWRATETSPPVRPPGLAA--CCRPVQEVLVGG--AVAGLLYLGLGDALEMPLSFSPEAI 57

Query: 200 --PAPRLQPSRTSPQAPRARAWAPSQA-----SQAALHVPYATINTSCRPATLDTAHPHG 252
             PAPR  P R     P  R  APS++         L  P A     C P       P G
Sbjct: 58  APPAPRPPPCR----GPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEG 113

Query: 253 GPSWWASLPTHAAHRPQGPAAWASTPI--PARGSFVS 287
                         RPQG A     P+  P +G+ VS
Sbjct: 114 --------QAGTGQRPQGLAESGEEPLPRPCQGTLVS 142


>gi|169214023 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 43/126 (34%), Positives = 54/126 (42%), Gaps = 25/126 (19%)

Query: 191 HLLRRHKHRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHP 250
           H L R  HRP P L+P R  P+AP          S AA   P+++I    RP +     P
Sbjct: 40  HELFRPAHRPGPALRP-RPQPKAP---------PSSAAPPTPHSSIPP--RPPS-----P 82

Query: 251 HGGPSWWASLPTHAAHRP--QGPAAWASTPIPARGSFVSVE-NGLYAQAGERPPHTGPGL 307
            G   W A  PT   HRP  +G  A    P PA GS    E  G  + + ER    G   
Sbjct: 83  WGPRVWGA--PT---HRPALKGTEAQLLAPGPAAGSGCWPELAGTESASAEREREGGGPR 137

Query: 308 TLFPDP 313
           ++ P P
Sbjct: 138 SIRPRP 143


>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
           sapiens]
          Length = 547

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 39/130 (30%), Positives = 48/130 (36%), Gaps = 22/130 (16%)

Query: 152 PSSDPGLSAPPTPAPILRADLAGILGVSGVLLFGCVYLLHLLRRHKHRPAPRLQPSRTSP 211
           P+  P  S   TP P+L       LG    +   C        R   +  P L+PS   P
Sbjct: 388 PARSPSQSPAGTPCPVLS------LGARRGVTLPCPVPAEAAPRDFCQRFPALEPSPRQP 441

Query: 212 --QAPR----------ARAWAPSQASQAALHVPYA--TINTSCRPATLDTAHPHGGPSWW 257
             +APR          A  WAP   +  A   PYA  T +   RPA L  +HP       
Sbjct: 442 PARAPRPSPDLPAPLDACPWAPPVYAPPAAPGPYAAWTSSRPARPAPL--SHPTARAFQV 499

Query: 258 ASLPTHAAHR 267
              P HAA R
Sbjct: 500 PRRPGHAARR 509


>gi|169214468 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 43/126 (34%), Positives = 54/126 (42%), Gaps = 25/126 (19%)

Query: 191 HLLRRHKHRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHP 250
           H L R  HRP P L+P R  P+AP          S AA   P+++I    RP +     P
Sbjct: 40  HELFRPAHRPGPALRP-RPQPKAP---------PSSAAPPTPHSSIPP--RPPS-----P 82

Query: 251 HGGPSWWASLPTHAAHRP--QGPAAWASTPIPARGSFVSVE-NGLYAQAGERPPHTGPGL 307
            G   W A  PT   HRP  +G  A    P PA GS    E  G  + + ER    G   
Sbjct: 83  WGPRVWGA--PT---HRPALKGTEAQLLAPGPAAGSGCWPELAGTESASAEREREGGGPR 137

Query: 308 TLFPDP 313
           ++ P P
Sbjct: 138 SIRPRP 143


>gi|7657154 hairy/enhancer-of-split related with YRPW motif-like
           [Homo sapiens]
          Length = 328

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 45/173 (26%), Positives = 65/173 (37%), Gaps = 46/173 (26%)

Query: 126 PCANTTFCCKFASFPEGSWEACGSLPPSSD-------------PGLSAPPTPAPILRADL 172
           P    T    F ++P   + +C  LP  S+             PG+S+P  P P LR   
Sbjct: 162 PSPTPTGPLAFPAWPWSFFHSCPGLPALSNQLAILGRVPSPVLPGVSSPAYPIPALRT-- 219

Query: 173 AGILGVSGVLLFGCVYLLHLLRRHKHRPAPR-LQPSRTSPQAPRARAWAPSQASQAALHV 231
           A +   +G++L                PA R + PSR +    RAR        + A  V
Sbjct: 220 APLRRATGIIL----------------PARRNVLPSRGASSTRRAR-----PLERPATPV 258

Query: 232 PYATINTSCRPATLDTAHPHGGPSWWASLPTHAAHRPQGPAAWASTPIPARGS 284
           P A  + + R +       H  P   +S PT     P G AA+ + P P   S
Sbjct: 259 PVAPSSRAARSS-------HIAPLLQSSSPTPPG--PTGSAAYVAVPTPNSSS 302


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 48/206 (23%), Positives = 66/206 (32%), Gaps = 38/206 (18%)

Query: 115  SLILEGSGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPPTPAPILRADLAG 174
            SL+   +   SP A        AS P GS+EA  S  P   P    P  P P+       
Sbjct: 1163 SLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRPG--PAPRQPLEPGPV------- 1213

Query: 175  ILGVSGVLLFGCVYLLHLLRRHKHRPAPRLQPSRTSP-QAPRARAWAPSQASQAALHVPY 233
                                R    P   L+   T P   P    W P+  S   L  P 
Sbjct: 1214 --------------------REPTAPESELEGQPTPPAPPPLPETWTPTARSSPPLPPPA 1253

Query: 234  ATINTSCRPATLDTAHPHGGPSWWASLPTHA-AHRPQGPAAWASTPIPARGSFVSVENGL 292
                ++  P T+ +  P     W   +P     +R + P   +  P PA     S E+  
Sbjct: 1254 EERTSAKGPETMASKFPSSSSDW--RVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSS 1311

Query: 293  YAQAGERPPH-----TGPGLTLFPDP 313
               AG+ P       TG  + + P P
Sbjct: 1312 GRAAGDTPERKEAAGTGKKVKVRPPP 1337


>gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 32/127 (25%), Positives = 42/127 (33%), Gaps = 17/127 (13%)

Query: 199 RPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCR--PATLDTAHPHGGPSW 256
           +PAP   P    P  P ARA    +A    +    A +    R  PA      P  GP  
Sbjct: 250 QPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGS 309

Query: 257 WASLPTHAAHRPQGPA---------------AWASTPIPARGSFVSVENGLYAQAGERPP 301
             S P+        PA               + AS+P+ AR      E G      + P 
Sbjct: 310 EGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGHLLYREDSPS 369

Query: 302 HTGPGLT 308
            + PG T
Sbjct: 370 RSWPGPT 376


>gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo
           sapiens]
          Length = 378

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 32/127 (25%), Positives = 42/127 (33%), Gaps = 17/127 (13%)

Query: 199 RPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCR--PATLDTAHPHGGPSW 256
           +PAP   P    P  P ARA    +A    +    A +    R  PA      P  GP  
Sbjct: 250 QPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGS 309

Query: 257 WASLPTHAAHRPQGPA---------------AWASTPIPARGSFVSVENGLYAQAGERPP 301
             S P+        PA               + AS+P+ AR      E G      + P 
Sbjct: 310 EGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGHLLYREDSPS 369

Query: 302 HTGPGLT 308
            + PG T
Sbjct: 370 RSWPGPT 376


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 51/187 (27%), Positives = 69/187 (36%), Gaps = 37/187 (19%)

Query: 140 PEGSWEACGSLPP--SSDPGLSAPPTPAPILRADLAGILGVSGVLLFGCVYLLHLLRRHK 197
           P G   A  ++PP  ++  G SA   PAP   A   G  GVSG                 
Sbjct: 287 PAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAA--GGPAGVSG----------------- 327

Query: 198 HRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHPHGGPSWW 257
            +P P    +  +  AP  +A +P +  QAA   P A    +  PA+   A    GP+  
Sbjct: 328 -QPGPG---AAAAAPAPGVKAESPKRVVQAA--PPAAQTLAASGPAST-AASMVIGPTMQ 380

Query: 258 ASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERPPHTGPGL--TLFPDPRG 315
            +LP+ AA  P  P      P  A G+               P  T  G+  TL P    
Sbjct: 381 GALPSPAAVPPPAPGTPTGLPKGAAGAVTQ-------SLSRTPTATTSGIRATLTPTVLA 433

Query: 316 PRAMEGP 322
           PR  + P
Sbjct: 434 PRLPQPP 440



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 210 SPQAPRARAWAPSQASQAALHVPYATINTSCRPATL--DTAHPHGGPSWWASLPTHAAHR 267
           +P AP   A AP+ A+ AA   P         PATL     HP G P+   ++P  AA +
Sbjct: 251 APAAPSPPA-APAPAAPAAAPPPPPPA-----PATLARPPGHPAGPPTAAPAVPPPAAAQ 304

Query: 268 PQGPAAWASTPIPARG 283
             G A  A  P PA G
Sbjct: 305 NGGSAGAAPAPAPAAG 320


>gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]
          Length = 352

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 29/156 (18%)

Query: 16  GLEGAMGHRTLVLPWVLLTLCVTAG-TPEVWVQVRMEATELSSF-----TIRCGFLGS-G 68
           GL GA G       W  L L +TA   P V  QV      +  F      + C F     
Sbjct: 5   GLAGAAGR------WWGLALGLTAFFLPGVHSQVVQVNDSMYGFIGTDVVLHCSFANPLP 58

Query: 69  SISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSIS--------LILEG 120
           S+ +  V+W          +A+ +P  G+   AP R+     + S +        L LE 
Sbjct: 59  SVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELED 118

Query: 121 SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDP 156
            G         + C+FA+FP G+ E+  +L   + P
Sbjct: 119 EGV--------YICEFATFPTGNRESQLNLTVMAKP 146


>gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]
          Length = 458

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 29/156 (18%)

Query: 16  GLEGAMGHRTLVLPWVLLTLCVTAG-TPEVWVQVRMEATELSSF-----TIRCGFLGS-G 68
           GL GA G       W  L L +TA   P V  QV      +  F      + C F     
Sbjct: 5   GLAGAAGR------WWGLALGLTAFFLPGVHSQVVQVNDSMYGFIGTDVVLHCSFANPLP 58

Query: 69  SISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSIS--------LILEG 120
           S+ +  V+W          +A+ +P  G+   AP R+     + S +        L LE 
Sbjct: 59  SVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELED 118

Query: 121 SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDP 156
            G         + C+FA+FP G+ E+  +L   + P
Sbjct: 119 EGV--------YICEFATFPTGNRESQLNLTVMAKP 146


>gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]
          Length = 517

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 29/156 (18%)

Query: 16  GLEGAMGHRTLVLPWVLLTLCVTAG-TPEVWVQVRMEATELSSF-----TIRCGFLGS-G 68
           GL GA G       W  L L +TA   P V  QV      +  F      + C F     
Sbjct: 5   GLAGAAGR------WWGLALGLTAFFLPGVHSQVVQVNDSMYGFIGTDVVLHCSFANPLP 58

Query: 69  SISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSIS--------LILEG 120
           S+ +  V+W          +A+ +P  G+   AP R+     + S +        L LE 
Sbjct: 59  SVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELED 118

Query: 121 SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDP 156
            G         + C+FA+FP G+ E+  +L   + P
Sbjct: 119 EGV--------YICEFATFPTGNRESQLNLTVMAKP 146


>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
          Length = 166

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 25/74 (33%), Positives = 27/74 (36%), Gaps = 6/74 (8%)

Query: 253 GPSWWASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGER--PPHTGPGLTLF 310
           GP      P     RPQGP      P P RG       G   Q G +  PP   PG    
Sbjct: 93  GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGR----PQGPPQQGGHQQGPPPPPPGKPQG 148

Query: 311 PDPRGPRAMEGPLG 324
           P P+G R    P G
Sbjct: 149 PPPQGGRPQGPPQG 162


>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 25/74 (33%), Positives = 27/74 (36%), Gaps = 6/74 (8%)

Query: 253 GPSWWASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGER--PPHTGPGLTLF 310
           GP      P     RPQGP      P P RG       G   Q G +  PP   PG    
Sbjct: 93  GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGR----PQGPPQQGGHQQGPPPPPPGKPQG 148

Query: 311 PDPRGPRAMEGPLG 324
           P P+G R    P G
Sbjct: 149 PPPQGGRPQGPPQG 162


>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 25/74 (33%), Positives = 27/74 (36%), Gaps = 6/74 (8%)

Query: 253 GPSWWASLPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGER--PPHTGPGLTLF 310
           GP      P     RPQGP      P P RG       G   Q G +  PP   PG    
Sbjct: 93  GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGR----PQGPPQQGGHQQGPPPPPPGKPQG 148

Query: 311 PDPRGPRAMEGPLG 324
           P P+G R    P G
Sbjct: 149 PPPQGGRPQGPPQG 162


>gi|119703742 vitelliform macular dystrophy 2-like 1 [Homo sapiens]
          Length = 509

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 16/39 (41%), Positives = 18/39 (46%)

Query: 128 ANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPPTPAP 166
           A+T   C  A  PEG+   C    P  DPGL  P  P P
Sbjct: 427 ASTGASCSCAVVPEGAAPECSCGDPLLDPGLPEPEAPPP 465


>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
          Length = 2608

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 13/111 (11%)

Query: 148  GSLPPSSDPGLSAPPTPAPILRADLAGILGVSGVLLFGCVYLLHLLRRHKHRPAPRLQPS 207
            G LP  S P    P    P     L    G+ G+ L   +  L + R+   R  P  +  
Sbjct: 1271 GDLPSDSPPDPQPPAASGPPSTVPLPHSSGIHGIALLSELADLAIQRQRSERTVPEEEED 1330

Query: 208  ----RTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHPHGGP 254
                     A  A AW+  +A         A +++S  PA   TA+P  GP
Sbjct: 1331 VLAFNLQHLATLATAWSLVEA---------AGLDSSTAPAQPPTANPCSGP 1372


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 15/213 (7%)

Query: 121 SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPP---TPAPILRADLAGILG 177
           S A++   + T     +  P        + PP + P L+ PP    P+P     L+ +  
Sbjct: 363 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT 422

Query: 178 VSGVLLFGCVYLLHLLRR-HKHRPAPRLQPSRTSPQAP--RARAWAPSQA--SQAALHVP 232
            S          +HLL+      P+P +Q   + P +P     A  PSQA  S AA  + 
Sbjct: 423 PSPQA--PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ 480

Query: 233 YATINTSCRPATLDTAHPHGGPSWWASLPTHAAH-RPQGPAAWASTPIPARGSFVSVENG 291
                 +  P +     P   P   A+ P   A   PQ P A A+ P+ A     S    
Sbjct: 481 VPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQA---LPSPPAS 537

Query: 292 LYAQAGERPPHTGPGLTL-FPDPRGPRAMEGPL 323
              QA   P  + P   L  P P+ P  +  PL
Sbjct: 538 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 570


>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 501

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 198 HRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHPHGGPSWW 257
           HRP+  L   R SP+AP    WA +   Q A H  +     + R    D  H   G S  
Sbjct: 356 HRPSLALGSDRRSPEAPHYLLWAAAVRGQEA-HSLWPLQPRARRQGGSD-RHRRRGQSGA 413

Query: 258 ASLPTHAAHRPQGPAAWASTPIPAR 282
           + L T AA   +     A  P PAR
Sbjct: 414 SGLGTAAAGAERTSPVGARPPPPAR 438


>gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 591

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 198 HRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHPHGGPSWW 257
           HRP+  L   R SP+AP    WA +   Q A H  +     + R    D  H   G S  
Sbjct: 446 HRPSLALGSDRRSPEAPHYLLWAAAVRGQEA-HSLWPLQPRARRQGGSD-RHRRRGQSGA 503

Query: 258 ASLPTHAAHRPQGPAAWASTPIPAR 282
           + L T AA   +     A  P PAR
Sbjct: 504 SGLGTAAAGAERTSPVGARPPPPAR 528


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 15/213 (7%)

Query: 121 SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPP---TPAPILRADLAGILG 177
           S A++   + T     +  P        + PP + P L+ PP    P+P     L+ +  
Sbjct: 324 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT 383

Query: 178 VSGVLLFGCVYLLHLLRR-HKHRPAPRLQPSRTSPQAP--RARAWAPSQA--SQAALHVP 232
            S          +HLL+      P+P +Q   + P +P     A  PSQA  S AA  + 
Sbjct: 384 PSPQA--PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ 441

Query: 233 YATINTSCRPATLDTAHPHGGPSWWASLPTHAAH-RPQGPAAWASTPIPARGSFVSVENG 291
                 +  P +     P   P   A+ P   A   PQ P A A+ P+ A     S    
Sbjct: 442 VPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQA---LPSPPAS 498

Query: 292 LYAQAGERPPHTGPGLTL-FPDPRGPRAMEGPL 323
              QA   P  + P   L  P P+ P  +  PL
Sbjct: 499 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 531



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 54/197 (27%), Positives = 71/197 (36%), Gaps = 23/197 (11%)

Query: 149 SLPPSSDPGLSAPPTP-APILRADLAGILGVSGVLLFGCVYLLHLLRRHKHRPAPRLQPS 207
           S  P + P  SAPP+P AP     L              +    L   H   P+P L P 
Sbjct: 291 SSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPL 350

Query: 208 RT-SPQAPRARAWAPSQA----------SQAALHVPYA----TINTSCRPATLDTAHPHG 252
            T  PQAP A A  P QA          S  A   P A     ++    P +   + P  
Sbjct: 351 ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 410

Query: 253 GP-SWWASLPTHAAHRP--QGPAAWASTPI---PARGSFVSVENGLYAQAGERPPHTGPG 306
            P S  AS P   +  P  Q P + A+ P+   P+  +   +           PP   P 
Sbjct: 411 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 470

Query: 307 LTLF-PDPRGPRAMEGP 322
           L L  P P+ P A+  P
Sbjct: 471 LQLAKPPPQAPPALATP 487


>gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo
           sapiens]
          Length = 591

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 198 HRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYATINTSCRPATLDTAHPHGGPSWW 257
           HRP+  L   R SP+AP    WA +   Q A H  +     + R    D  H   G S  
Sbjct: 446 HRPSLALGSDRRSPEAPHYLLWAAAVRGQEA-HSLWPLQPRARRQGGSD-RHRRRGQSGA 503

Query: 258 ASLPTHAAHRPQGPAAWASTPIPAR 282
           + L T AA   +     A  P PAR
Sbjct: 504 SGLGTAAAGAERTSPVGARPPPPAR 528


>gi|4501897 activin A receptor, type IIA precursor [Homo sapiens]
          Length = 513

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 150 LPPSSDPGLSAPPTPAPILRADLAGILGVSGVLLFGCVYLLHLLRRH 196
           L P+ DPG   PP P+P+L      +L V     FGCV+   LL  +
Sbjct: 172 LVPTQDPG---PPPPSPLLGLKPLQLLEVKARGRFGCVWKAQLLNEY 215


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 20/135 (14%)

Query: 200 PAPRLQPSRTS--PQAPRARAWAPSQASQAALHVPYATIN--TSCRPATLDTAHPHGGPS 255
           P P   PS T+  PQ     + AP+Q       VP+  I    +  P    + HP   PS
Sbjct: 208 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS 267

Query: 256 WWASLP--THAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERPPHTGPGLTLFPDP 313
               L   T +A +P  P + A  P+  +G           QAG    H GP     P P
Sbjct: 268 PHPPLQPLTGSAGQPSAP-SHAQPPLHGQGP----PGPHSLQAGPLLQHPGP-----PQP 317

Query: 314 RG--PRAMEG--PLG 324
            G  P+A +G  PLG
Sbjct: 318 FGLPPQASQGQAPLG 332


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 20/135 (14%)

Query: 200 PAPRLQPSRTS--PQAPRARAWAPSQASQAALHVPYATIN--TSCRPATLDTAHPHGGPS 255
           P P   PS T+  PQ     + AP+Q       VP+  I    +  P    + HP   PS
Sbjct: 762 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS 821

Query: 256 WWASLP--THAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERPPHTGPGLTLFPDP 313
               L   T +A +P  P + A  P+  +G           QAG    H GP     P P
Sbjct: 822 PHPPLQPLTGSAGQPSAP-SHAQPPLHGQGP----PGPHSLQAGPLLQHPGP-----PQP 871

Query: 314 RG--PRAMEG--PLG 324
            G  P+A +G  PLG
Sbjct: 872 FGLPPQASQGQAPLG 886


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 20/135 (14%)

Query: 200 PAPRLQPSRTS--PQAPRARAWAPSQASQAALHVPYATIN--TSCRPATLDTAHPHGGPS 255
           P P   PS T+  PQ     + AP+Q       VP+  I    +  P    + HP   PS
Sbjct: 762 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS 821

Query: 256 WWASLP--THAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERPPHTGPGLTLFPDP 313
               L   T +A +P  P + A  P+  +G           QAG    H GP     P P
Sbjct: 822 PHPPLQPLTGSAGQPSAP-SHAQPPLHGQGP----PGPHSLQAGPLLQHPGP-----PQP 871

Query: 314 RG--PRAMEG--PLG 324
            G  P+A +G  PLG
Sbjct: 872 FGLPPQASQGQAPLG 886


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,155,626
Number of Sequences: 37866
Number of extensions: 984863
Number of successful extensions: 5918
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 5202
Number of HSP's gapped (non-prelim): 967
length of query: 326
length of database: 18,247,518
effective HSP length: 103
effective length of query: 223
effective length of database: 14,347,320
effective search space: 3199452360
effective search space used: 3199452360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.