Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 57863257
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|57863257 T-complex protein 1 isoform a [Homo sapiens]
(556 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57863257 T-complex protein 1 isoform a [Homo sapiens] 1068 0.0
gi|57863259 T-complex protein 1 isoform b [Homo sapiens] 773 0.0
gi|5453607 chaperonin containing TCP1, subunit 7 isoform a [Homo... 302 6e-82
gi|5453603 chaperonin containing TCP1, subunit 2 [Homo sapiens] 294 2e-79
gi|63162572 chaperonin containing TCP1, subunit 3 isoform a [Hom... 286 3e-77
gi|58761486 chaperonin containing TCP1, subunit 3 isoform b [Hom... 280 2e-75
gi|38455427 chaperonin containing TCP1, subunit 4 (delta) [Homo ... 276 3e-74
gi|24307939 chaperonin containing TCP1, subunit 5 (epsilon) [Hom... 267 2e-71
gi|48762932 chaperonin containing TCP1, subunit 8 (theta) [Homo ... 245 7e-65
gi|58331173 chaperonin containing TCP1, subunit 6B [Homo sapiens] 242 6e-64
gi|4502643 chaperonin containing TCP1, subunit 6A isoform a [Hom... 242 6e-64
gi|58761484 chaperonin containing TCP1, subunit 3 isoform c [Hom... 239 4e-63
gi|58331171 chaperonin containing TCP1, subunit 6A isoform b [Ho... 181 2e-45
gi|58331185 chaperonin containing TCP1, subunit 7 isoform b [Hom... 173 4e-43
gi|7657253 T-complex protein 1 [Homo sapiens] 122 7e-28
gi|41399285 chaperonin [Homo sapiens] 58 2e-08
gi|31542947 chaperonin [Homo sapiens] 58 2e-08
gi|100816407 Bardet-Biedl syndrome 10 [Homo sapiens] 49 9e-06
gi|9055272 McKusick-Kaufman syndrome protein [Homo sapiens] 40 0.007
gi|25914754 McKusick-Kaufman syndrome protein [Homo sapiens] 40 0.007
gi|31543157 glycine-N-acyltransferase-like 1 [Homo sapiens] 33 0.90
gi|7706322 homeobox prox 1 [Homo sapiens] 32 1.5
gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens] 29 9.9
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 29 9.9
gi|46048234 nucleolar protein 8 [Homo sapiens] 29 9.9
>gi|57863257 T-complex protein 1 isoform a [Homo sapiens]
Length = 556
Score = 1068 bits (2763), Expect = 0.0
Identities = 556/556 (100%), Positives = 556/556 (100%)
Query: 1 MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGAT 60
MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGAT
Sbjct: 1 MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGAT 60
Query: 61 ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG 120
ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG
Sbjct: 61 ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG 120
Query: 121 YRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIK 180
YRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIK
Sbjct: 121 YRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIK 180
Query: 181 YTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFS 240
YTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFS
Sbjct: 181 YTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFS 240
Query: 241 LQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYF 300
LQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYF
Sbjct: 241 LQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYF 300
Query: 301 VEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDE 360
VEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDE
Sbjct: 301 VEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDE 360
Query: 361 LILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALS 420
LILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALS
Sbjct: 361 LILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALS 420
Query: 421 IYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPER 480
IYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPER
Sbjct: 421 IYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPER 480
Query: 481 KNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD 540
KNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD
Sbjct: 481 KNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD 540
Query: 541 KHGSYEDAVHSGALND 556
KHGSYEDAVHSGALND
Sbjct: 541 KHGSYEDAVHSGALND 556
>gi|57863259 T-complex protein 1 isoform b [Homo sapiens]
Length = 401
Score = 773 bits (1996), Expect = 0.0
Identities = 401/401 (100%), Positives = 401/401 (100%)
Query: 156 MSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYA 215
MSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYA
Sbjct: 1 MSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYA 60
Query: 216 LNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERI 275
LNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERI
Sbjct: 61 LNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERI 120
Query: 276 QKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLE 335
QKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLE
Sbjct: 121 QKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLE 180
Query: 336 GEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDA 395
GEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDA
Sbjct: 181 GEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDA 240
Query: 396 LCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVN 455
LCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVN
Sbjct: 241 LCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVN 300
Query: 456 AAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLK 515
AAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLK
Sbjct: 301 AAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLK 360
Query: 516 FATEAAITILRIDDLIKLHPESKDDKHGSYEDAVHSGALND 556
FATEAAITILRIDDLIKLHPESKDDKHGSYEDAVHSGALND
Sbjct: 361 FATEAAITILRIDDLIKLHPESKDDKHGSYEDAVHSGALND 401
>gi|5453607 chaperonin containing TCP1, subunit 7 isoform a [Homo
sapiens]
Length = 543
Score = 302 bits (773), Expect = 6e-82
Identities = 192/537 (35%), Positives = 294/537 (54%), Gaps = 28/537 (5%)
Query: 10 DRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
D S G N+ A IA V+++LGP G+DK++VD G TI+NDGATILKLL+V H
Sbjct: 14 DSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVH 73
Query: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
PAAK L ++A QD EVGDGTTSV ++AAE LK V++ +HP +I +R A + AV
Sbjct: 74 PAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAV 133
Query: 130 RYINENLIV--NTDEL-GRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRG 186
I E + D++ R L A T++SSK+I FFA MVVDAV+ +
Sbjct: 134 NKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMML------- 186
Query: 187 QPRYPVNSVNILKAHGRSQMESMLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQK 243
+ + I K G + +S L++G A G + PK+ N KIA L+ L+
Sbjct: 187 DDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELEL 246
Query: 244 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA 303
K ++ + E I E +I ++++KI +GA V+L+ I D+ +YF +
Sbjct: 247 KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR 306
Query: 304 GAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELIL 363
RV + DLKR A G +I +++ A +LG+ + + +I +
Sbjct: 307 DMFCAGRVPEEDLKRTMMACGGSIQTSV------NALSADVLGRCQVFEETQIGGERYNF 360
Query: 364 IKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYL 423
+ + ILRG + +E ERSLHDA+ +V+R +++ SVV GGGA+E LS YL
Sbjct: 361 FTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL 420
Query: 424 ENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNL 483
+Y+ ++ ++QL I +A++L +IP L NA D+T+++ KLRA H +
Sbjct: 421 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT------- 473
Query: 484 KWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD 540
W G+D++N DN +A V+EP +V++ +L A+EAA I+ +D+ IK +P S D
Sbjct: 474 -WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK-NPRSTVD 528
>gi|5453603 chaperonin containing TCP1, subunit 2 [Homo sapiens]
Length = 535
Score = 294 bits (752), Expect = 2e-79
Identities = 193/547 (35%), Positives = 305/547 (55%), Gaps = 30/547 (5%)
Query: 4 PLSVF---GDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVT--ITNDG 58
P+++F D ET R + + A +I ++VKS+LGP G+DK+L+ D + +TNDG
Sbjct: 8 PVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDG 67
Query: 59 ATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVI 118
ATILK + V++PAAKVL +++ +QD EVGDGTTSV ++AAELL+ A+ L+ +KIHP ++I
Sbjct: 68 ATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTII 127
Query: 119 SGYRLACKEAVRYINENLIVN-TDELG-RDCLINAAKTSMSSKIIGINGDFFANMVVDAV 176
+G+R A K A + + + + +DE+ R L+N A T++SSK++ + D F + V+AV
Sbjct: 128 AGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAV 187
Query: 177 LAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIAC 236
L +K + + +++I+K G S +S L G+ L+ +G PKRI NAKI
Sbjct: 188 LRLKGSG-------NLEAIHIIKKLGGSLADSYLDEGFLLDKKIG-VNQPKRIENAKILI 239
Query: 237 LDFSLQKTKMKL-GVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDM 295
+ + K+K+ G +V + K+ +I E + KE++++IL G N + I +
Sbjct: 240 ANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNY 299
Query: 296 CLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQER 355
+ F AG MA+ ++R+A +G I ST + E LG + + +
Sbjct: 300 PEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTF------DHPELVKLGSCKLIEEVM 353
Query: 356 ICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAV 415
I +D+LI + +I+LRGA + DE ERSLHDALCV+ + ++ V GGG
Sbjct: 354 IGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCS 413
Query: 416 EAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQ 475
E ++ + A +E +A+ +A++L ++P +A NA DS DLVA+LRA H+E
Sbjct: 414 EMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGN 473
Query: 476 VNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 535
GLD+ G D G+ E VK + L A EAA ILR+D++IK P
Sbjct: 474 TT--------AGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAP 525
Query: 536 ESKDDKH 542
+ H
Sbjct: 526 RKRVPDH 532
>gi|63162572 chaperonin containing TCP1, subunit 3 isoform a [Homo
sapiens]
Length = 545
Score = 286 bits (733), Expect = 3e-77
Identities = 181/541 (33%), Positives = 297/541 (54%), Gaps = 17/541 (3%)
Query: 11 RSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHP 70
R +G ++S N+ AA +IA+I+++ LGP + KML+D +G + +TNDG IL+ ++V+HP
Sbjct: 16 RESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHP 75
Query: 71 AAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVR 130
AAK + E++ QD+EVGDGTTSV+I+A E+L A+ ++Q++HPT VIS YR A + +
Sbjct: 76 AAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIS 135
Query: 131 YINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRY 190
+ + + + D D ++N +S+++K I N+ +DAV +++ + G+
Sbjct: 136 TL-KKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEE-NGRKEI 193
Query: 191 PVNS-VNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLG 249
+ + K G +S ++ G +N V M + I N +I LD SL+ K +
Sbjct: 194 DIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQ 253
Query: 250 VQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVR 309
+ IT E +I Q E + ++ + I+ +V++T GI D+ Y + A A+R
Sbjct: 254 TDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIR 313
Query: 310 RVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKA 369
RV K D RIA+A GA I+S L ++ A L + ++I D+ I + K
Sbjct: 314 RVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEI-----KKIGDEYFTFITDCKD 368
Query: 370 RTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 429
+ +I+LRGA+ + E+ER+L DA+ V + VL +VPGGGA E A++ L + +
Sbjct: 369 PKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKA 428
Query: 430 MGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLD 489
M EQ A++L VIP TL N + L+ LRA H + +N + G++
Sbjct: 429 MTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ-------ENCETWGVN 481
Query: 490 LSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD--KHGSYED 547
G D K+ G++EP VK+++ K A E A+ +LRIDD++ H + DD + G D
Sbjct: 482 GETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPD 541
Query: 548 A 548
A
Sbjct: 542 A 542
>gi|58761486 chaperonin containing TCP1, subunit 3 isoform b [Homo
sapiens]
Length = 544
Score = 280 bits (717), Expect = 2e-75
Identities = 180/541 (33%), Positives = 296/541 (54%), Gaps = 18/541 (3%)
Query: 11 RSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHP 70
R +G ++S N+ AA +IA+I+++ LGP + KML+D +G + +TNDG IL+ ++V+HP
Sbjct: 16 RESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHP 75
Query: 71 AAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVR 130
AAK + E++ QD+EVGDGTTSV+I+ E+L A+ ++Q++HPT VIS YR A + +
Sbjct: 76 AAKSMIEISRTQDEEVGDGTTSVIIL-GEMLSVAEHFLEQQMHPTVVISAYRKALDDMIS 134
Query: 131 YINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRY 190
+ + + + D D ++N +S+++K I N+ +DAV +++ + G+
Sbjct: 135 TL-KKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEE-NGRKEI 192
Query: 191 PVNS-VNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLG 249
+ + K G +S ++ G +N V M + I N +I LD SL+ K +
Sbjct: 193 DIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQ 252
Query: 250 VQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVR 309
+ IT E +I Q E + ++ + I+ +V++T GI D+ Y + A A+R
Sbjct: 253 TDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIR 312
Query: 310 RVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKA 369
RV K D RIA+A GA I+S L ++ A L + ++I D+ I + K
Sbjct: 313 RVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEI-----KKIGDEYFTFITDCKD 367
Query: 370 RTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 429
+ +I+LRGA+ + E+ER+L DA+ V + VL +VPGGGA E A++ L + +
Sbjct: 368 PKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKA 427
Query: 430 MGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLD 489
M EQ A++L VIP TL N + L+ LRA H + +N + G++
Sbjct: 428 MTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ-------ENCETWGVN 480
Query: 490 LSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD--KHGSYED 547
G D K+ G++EP VK+++ K A E A+ +LRIDD++ H + DD + G D
Sbjct: 481 GETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPD 540
Query: 548 A 548
A
Sbjct: 541 A 541
>gi|38455427 chaperonin containing TCP1, subunit 4 (delta) [Homo
sapiens]
Length = 539
Score = 276 bits (707), Expect = 3e-74
Identities = 173/532 (32%), Positives = 296/532 (55%), Gaps = 27/532 (5%)
Query: 8 FGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEV 67
+ DR IR N+ AA ++A+ +++SLGP G+DKM+ D GDVTITNDGATILK ++V
Sbjct: 24 YQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQV 83
Query: 68 EHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKE 127
HPAA++L EL+ QD E GDGTTSVVIIA LL + +L+++ IHPT + ++ A ++
Sbjct: 84 LHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEK 143
Query: 128 AVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQ 187
+ + + + + R+ L+N+A TS++SK++ + M V+AV+ K D
Sbjct: 144 GIEILTD-MSRPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVM--KVIDPATA 200
Query: 188 PRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMK 247
+ + I+K G + + L+ G L V + G+ R+ AKI + F L K
Sbjct: 201 TSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGI-TRVEKAKIGLIQFCLSAPKTD 259
Query: 248 LGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGI-----DDMCLKYFVE 302
+ Q+V++D ++D++ + E +++I TG NV+L I D+ L + +
Sbjct: 260 MDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNK 319
Query: 303 AGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELI 362
M ++ + + D++ I K G ++ + + F A MLG A E+ +E +
Sbjct: 320 MKIMVIKDIEREDIEFICKTIGTKPVAHI------DQFTADMLGSA-ELAEEVNLNGSGK 372
Query: 363 LIKNTKART---SASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAAL 419
L+K T + + +I++RG+N + +E ERS+HDALCV++ +++ ++++ GGGA E L
Sbjct: 373 LLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIEL 432
Query: 420 SIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPE 479
++ L Y+ ++ E + FA ++ VIP+TLA NA + V +LR H + +
Sbjct: 433 ALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGE---- 488
Query: 480 RKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
K G+++ G + + V +P +V V +L ATE +IL+IDD++
Sbjct: 489 ----KTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV 536
>gi|24307939 chaperonin containing TCP1, subunit 5 (epsilon) [Homo
sapiens]
Length = 541
Score = 267 bits (683), Expect = 2e-71
Identities = 171/524 (32%), Positives = 290/524 (55%), Gaps = 26/524 (4%)
Query: 15 ETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKV 74
E ++S ++MAA ++AN +++SLGP GLDKM+VD GDVT+TNDGATIL +++V+H AK+
Sbjct: 32 EALKS-HIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKL 90
Query: 75 LCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY--- 131
+ EL+ QD E+GDGTT VV++A LL+ A++L+ + IHP + GY A + A+ +
Sbjct: 91 MVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDK 150
Query: 132 INENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYP 191
I+++++V+ + + LI AKT++ SK++ A + V+AVL + + R
Sbjct: 151 ISDSVLVDIKD--TEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDV---- 204
Query: 192 VNSVNILKAHGR---SQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKL 248
++K G+ ++ LI G ++ MPK++ +AKIA L + K K
Sbjct: 205 --DFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKT 262
Query: 249 GVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAV 308
++ +T E +++ E + +E IQ+I TGAN+ + G DD ++ AV
Sbjct: 263 KHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAV 322
Query: 309 RRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTK 368
R V +++ IA A+G I+ + L E+ A ++ + + D++++I+ K
Sbjct: 323 RWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLV----QEISFGTTKDKMLVIEQCK 378
Query: 369 ARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYAT 428
+ +I +RG N + +E +RSLHDALCV++ ++ VV GGGA E + ++ + A
Sbjct: 379 NSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEAD 438
Query: 429 SMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGL 488
+ EQ A+ FA +L VIP L+ N+ + + ++RA ++NP +G+
Sbjct: 439 KCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRA-RQVKEMNPA------LGI 491
Query: 489 DLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
D + D KQ V E I K + + AT+ IL+IDD+ K
Sbjct: 492 DCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRK 535
>gi|48762932 chaperonin containing TCP1, subunit 8 (theta) [Homo
sapiens]
Length = 548
Score = 245 bits (626), Expect = 7e-65
Identities = 163/521 (31%), Positives = 277/521 (53%), Gaps = 27/521 (5%)
Query: 20 QNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELA 79
+N+ A +A +++ GP G++KM+++ + + +TND ATIL+ LEV+HPAAK++ +
Sbjct: 31 RNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMAS 90
Query: 80 DLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVN 139
+Q++EVGDGT V++ A LL+ A+EL++ + + VI GY +AC++A I NL+
Sbjct: 91 HMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKA-HEILPNLVCC 149
Query: 140 TDELGRDC--LINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNI 197
+ + RD + + +TS+ SK G N F A ++ A ++I + V+++ +
Sbjct: 150 SAKNLRDIDEVSSLLRTSIMSKQYG-NEVFLAKLIAQACVSI----FPDSGHFNVDNIRV 204
Query: 198 LKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDP 257
K G S ++ G ++G + +AKIA + V+I
Sbjct: 205 CKILGSGISSSSVLHGMVFK--KETEGDVTSVKDAKIAVYSCPFDGMITETKGTVLIKTA 262
Query: 258 EKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLK 317
E+L + E ++ +++ I TGANV++T G + DM L Y + M VR K DL+
Sbjct: 263 EELMNFSKGEENLMDAQVKAIADTGANVVVTGGKVADMALHYANKYNIMLVRLNSKWDLR 322
Query: 318 RIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSAS-II 376
R+ K GAT L L EE +G + V + D ++++ K+ K + S I+
Sbjct: 323 RLCKTVGATALPRLTPPVLEE------MGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIV 376
Query: 377 LRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQL 436
LRG+ D + D++ER++ D + K + K +VPGGGA E L+ + +Y + EQ
Sbjct: 377 LRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQY 436
Query: 437 AIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKP- 495
AI +FA + IP LA N+ + ++++KL A H E N +GLD+ P
Sbjct: 437 AIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKN--------VGLDIEAEVPA 488
Query: 496 -RDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 535
+D +AG+ + + K ++K AT AA+T+LR+D +I P
Sbjct: 489 VKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKP 529
>gi|58331173 chaperonin containing TCP1, subunit 6B [Homo sapiens]
Length = 530
Score = 242 bits (618), Expect = 6e-64
Identities = 150/523 (28%), Positives = 277/523 (52%), Gaps = 33/523 (6%)
Query: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80
N+ AA + ++++++LGP G KMLV GD+ +T DG +L ++++HP A ++ ++A
Sbjct: 23 NICAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLDEMQIQHPTASLIAKVAT 82
Query: 81 LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVNT 140
QD GDGTTS V+I ELLK AD + + +HP + G+ A +A+ + E + T
Sbjct: 83 AQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFEAAKIKALEVLEE--VKVT 140
Query: 141 DELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVN--SVNIL 198
E+ R L++ A+TS+ +K+ D +VVD+VLA++ +P YP++ V I+
Sbjct: 141 KEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR------RPGYPIDLFMVEIM 194
Query: 199 KAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPE 258
+ + ++ LI G L+ M KR+ +A I + SL+ K ++ E
Sbjct: 195 EMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAE 254
Query: 259 KLDQIRQRESDITKERIQKIL---------ATGANVILTTGGIDDMCLKYFVEAGAMAVR 309
+ +++ + E ++R+QKI+ + V++ GID L + G +A+R
Sbjct: 255 EKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALR 314
Query: 310 RVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKA 369
R +R+++R++ A G +++ +L + LG A V + + +++ I+
Sbjct: 315 RAKRRNMERLSLACGGMAVNSFEDLTVD------CLGHAGLVYEYTLGEEKFTFIEECVN 368
Query: 370 RTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 429
S +++++G N +++ ++ D L +K +E +VPG GA+E A++ L Y S
Sbjct: 369 PCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAEALVTYKNS 428
Query: 430 MGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLD 489
+ R +L + FA +LL+IP LA NA D + + K++A H E++ + +G+D
Sbjct: 429 IKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESK--------QLVGVD 480
Query: 490 LSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
L+ G+P AGV++ VK + L T A IL +D++++
Sbjct: 481 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMR 523
>gi|4502643 chaperonin containing TCP1, subunit 6A isoform a [Homo
sapiens]
Length = 531
Score = 242 bits (618), Expect = 6e-64
Identities = 150/521 (28%), Positives = 279/521 (53%), Gaps = 29/521 (5%)
Query: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80
N+ AA + ++++++LGP G KMLV GD+ +T DG +L ++++HP A ++ ++A
Sbjct: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVAT 82
Query: 81 LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVNT 140
QD GDGTTS V+I ELLK AD + + +HP + G+ A ++A++++ E + +
Sbjct: 83 AQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEE--VKVS 140
Query: 141 DELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNILKA 200
E+ R+ LI+ A+TS+ +K+ D VVD++LAIK D +P + + I++
Sbjct: 141 REMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQD---EP-IDLFMIEIMEM 196
Query: 201 HGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKL 260
+S+ ++ LI G L+ M KR+ +A I + SL+ K ++ E+
Sbjct: 197 KHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEER 256
Query: 261 DQIRQRESDITKERIQKIL---------ATGANVILTTGGIDDMCLKYFVEAGAMAVRRV 311
+++ + E ++R++KI+ + V++ GID L + G +A+RR
Sbjct: 257 EKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRA 316
Query: 312 LKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKART 371
+R+++R+ A G L++ +L + LG A V + + +++ I+
Sbjct: 317 KRRNMERLTLACGGVALNSFDDLSPD------CLGHAGLVYEYTLGEEKFTFIEKCNNPR 370
Query: 372 SASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMG 431
S +++++G N +++ ++ D L VK ++ VVPG GAVE A++ L + S+
Sbjct: 371 SVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVK 430
Query: 432 SREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLS 491
R QL + FA +LL+IP LA N+ D + + K++A H+E+ + +G+DL+
Sbjct: 431 GRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESG--------QLVGVDLN 482
Query: 492 NGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
G+P + GV++ VK + L T A IL +D++++
Sbjct: 483 TGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMR 523
>gi|58761484 chaperonin containing TCP1, subunit 3 isoform c [Homo
sapiens]
Length = 507
Score = 239 bits (611), Expect = 4e-63
Identities = 158/487 (32%), Positives = 259/487 (53%), Gaps = 17/487 (3%)
Query: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
++V+HPAAK + E++ QD+EVGDGTTSV+I+A E+L A+ ++Q++HPT VIS YR A
Sbjct: 32 IQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKA 91
Query: 125 CKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDI 184
+ + + + + + D D ++N +S+++K I N+ +DAV +++ +
Sbjct: 92 LDDMISTL-KKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEE- 149
Query: 185 RGQPRYPVNS-VNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQK 243
G+ + + K G +S ++ G +N V M + I N +I LD SL+
Sbjct: 150 NGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEY 209
Query: 244 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA 303
K + + IT E +I Q E + ++ + I+ +V++T GI D+ Y + A
Sbjct: 210 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA 269
Query: 304 GAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELIL 363
A+RRV K D RIA+A GA I+S L ++ A L + ++I D+
Sbjct: 270 NITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEI-----KKIGDEYFTF 324
Query: 364 IKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYL 423
I + K + +I+LRGA+ + E+ER+L DA+ V + VL +VPGGGA E A++ L
Sbjct: 325 ITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHAL 384
Query: 424 ENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNL 483
+ +M EQ A++L VIP TL N + L+ LRA H + +N
Sbjct: 385 TEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ-------ENC 437
Query: 484 KWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD--K 541
+ G++ G D K+ G++EP VK+++ K A E A+ +LRIDD++ H + DD +
Sbjct: 438 ETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSR 497
Query: 542 HGSYEDA 548
G DA
Sbjct: 498 QGGAPDA 504
>gi|58331171 chaperonin containing TCP1, subunit 6A isoform b [Homo
sapiens]
Length = 486
Score = 181 bits (459), Expect = 2e-45
Identities = 132/523 (25%), Positives = 250/523 (47%), Gaps = 78/523 (14%)
Query: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80
N+ AA + ++++++LGP G KMLV GD+ +T DG +L
Sbjct: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLH----------------- 65
Query: 81 LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVNT 140
E+G +HP + G+ A ++A++++ E + +
Sbjct: 66 ----EMG------------------------LHPRIITEGFEAAKEKALQFLEEVKV--S 95
Query: 141 DELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVN--SVNIL 198
E+ R+ LI+ A+TS+ +K+ D VVD++LAIK D P++ + I+
Sbjct: 96 REMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQD------EPIDLFMIEIM 149
Query: 199 KAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPE 258
+ +S+ ++ LI G L+ M KR+ +A I + SL+ K ++ E
Sbjct: 150 EMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAE 209
Query: 259 KLDQIRQRESDITKERIQKILATGANV---------ILTTGGIDDMCLKYFVEAGAMAVR 309
+ +++ + E ++R++KI+ V ++ GID L + G +A+R
Sbjct: 210 EREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALR 269
Query: 310 RVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKA 369
R +R+++R+ A G L++ +L + LG A V + + +++ I+
Sbjct: 270 RAKRRNMERLTLACGGVALNSFDDLSPD------CLGHAGLVYEYTLGEEKFTFIEKCNN 323
Query: 370 RTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 429
S +++++G N +++ ++ D L VK ++ VVPG GAVE A++ L + S
Sbjct: 324 PRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPS 383
Query: 430 MGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLD 489
+ R QL + FA +LL+IP LA N+ D + + K++A H+E+ + +G+D
Sbjct: 384 VKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESG--------QLVGVD 435
Query: 490 LSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
L+ G+P + GV++ VK + L T A IL +D++++
Sbjct: 436 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMR 478
>gi|58331185 chaperonin containing TCP1, subunit 7 isoform b [Homo
sapiens]
Length = 339
Score = 173 bits (438), Expect = 4e-43
Identities = 109/338 (32%), Positives = 182/338 (53%), Gaps = 18/338 (5%)
Query: 206 MESMLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQ 262
M+S L++G A G + PK+ N KIA L+ L+ K ++ + E
Sbjct: 2 MDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAEIRVHTVEDYQA 61
Query: 263 IRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKA 322
I E +I ++++KI +GA V+L+ I D+ +YF + RV + DLKR A
Sbjct: 62 IVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMA 121
Query: 323 SGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGAND 382
G +I +++ L + +LG+ + + +I + + + ILRG +
Sbjct: 122 CGGSIQTSVNALSAD------VLGRCQVFEETQIGGERYNFFTGCPKAKTCTFILRGGAE 175
Query: 383 FMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFA 442
+E ERSLHDA+ +V+R +++ SVV GGGA+E LS YL +Y+ ++ ++QL I +A
Sbjct: 176 QFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYA 235
Query: 443 RSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAG 502
++L +IP L NA D+T+++ KLRA H + W G+D++N DN +A
Sbjct: 236 KALEIIPRQLCDNAGFDATNILNKLRARHAQGGT--------WYGVDINNEDIADNFEAF 287
Query: 503 VFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD 540
V+EP +V++ +L A+EAA I+ +D+ IK +P S D
Sbjct: 288 VWEPAMVRINALTAASEAACLIVSVDETIK-NPRSTVD 324
>gi|7657253 T-complex protein 1 [Homo sapiens]
Length = 557
Score = 122 bits (307), Expect = 7e-28
Identities = 113/514 (21%), Positives = 221/514 (42%), Gaps = 31/514 (6%)
Query: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80
++ A ++A++++ GP G K LV G+ T IL+ LE+EHPAA +L E
Sbjct: 36 SLAAVQTLASVIRPCYGPHGRQKFLVTMKGETVCTGCATAILRALELEHPAAWLLREAGQ 95
Query: 81 LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVNT 140
Q + GDGT VV++ LL+ A++L+K + + Y A E + + I +
Sbjct: 96 TQAENSGDGTAFVVLLTEALLEQAEQLLKAGLPRPQLREAYATATAEVLATLPSLAIQSL 155
Query: 141 DELGRD--CLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNIL 198
L L + T S + D +V A AIK D +P V +
Sbjct: 156 GPLEDPSWALHSVMNTHTLSPM-----DHLTKLVAHACWAIKELDGSFKP----ERVGVC 206
Query: 199 KAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPE 258
G + +S L+ G A++ + Q M + A++A ++ P
Sbjct: 207 ALPGGTLEDSCLLPGLAISGKLCGQ-MATVLSGARVALFACPFGPAHPNAPATARLSSPA 265
Query: 259 KLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKR 318
L Q + + ++++ ++ A G NV + G +D+ L + G + ++ ++
Sbjct: 266 DLAQFSKGSDQLLEKQVGQLAAAGINVAVVLGEVDEETLTLADKYGIVVIQARSWMEIIY 325
Query: 319 IAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSA-SIIL 377
+++ +L L G+ + V ++ + D ++ + T A +++L
Sbjct: 326 LSEVLDTPLLPRL--------LPPQRPGKCQRVYRQELGDGLAVVFEWECTGTPALTVVL 377
Query: 378 RGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLA 437
RGA E++++ + ++ + ++PG GA E AL+ L + + + A
Sbjct: 378 RGATTQGLRSAEQAVYHGIDAYFQLCQDPRLIPGAGATEMALAKMLSDKGSRLEGPSGPA 437
Query: 438 IAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRD 497
FA +L +P TLA NA +D++A++ H + L +G + +
Sbjct: 438 FLAFAWALKYLPKTLAENAGLAVSDVMAEMSGVHQGGNL------LMGVGTE----GIIN 487
Query: 498 NKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
Q GV++ IVK + + E + ++ +D+++
Sbjct: 488 VAQEGVWDTLIVKAQGFRAVAEVVLQLVTVDEIV 521
>gi|41399285 chaperonin [Homo sapiens]
Length = 573
Score = 58.2 bits (139), Expect = 2e-08
Identities = 107/567 (18%), Positives = 222/567 (39%), Gaps = 76/567 (13%)
Query: 10 DRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
D G R+ + +A+ V ++GP G ++ G +T DG T+ K ++++
Sbjct: 29 DVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKD 88
Query: 70 P----AAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLAC 125
AK++ ++A+ ++E GDGTT+ ++A + K E + + +P + G LA
Sbjct: 89 KYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAV 148
Query: 126 KEAVRYINE---------------NLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFAN 170
+ + + + N D+ + + +A K +I + N
Sbjct: 149 DAVIAELKKQSKPVTTPEEIAQVATISANGDKEIGNIISDAMKKVGRKGVITVKDGKTLN 208
Query: 171 MVVDAVLAIKY----------TDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVV 220
++ + +K+ +GQ ++ +L S ++S++ AL +
Sbjct: 209 DELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIV---PALE-IA 264
Query: 221 GSQGMPKRIVNAKIACLDFS-LQKTKMKLGVQVV-ITDPEKLDQIRQRESDITKERIQKI 278
+ P I+ + S L ++K+G+QVV + P D + + D+
Sbjct: 265 NAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMA------- 317
Query: 279 LATGANVILTTG---GIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLE 335
+ATG V G ++D+ + G + ++ +D + K G E
Sbjct: 318 IATGGAVFGEEGLTLNLEDVQPHDLGKVGEV----IVTKDDAMLLKGKGDKAQIEKRIQE 373
Query: 336 GEETFEAAMLGQAEEVVQERIC--DDELILIKNTKARTSASIILRGANDFMCDEMERSLH 393
E + +E + ER+ D + ++K + G +D +E + +
Sbjct: 374 IIEQLDVTTSEYEKEKLNERLAKLSDGVAVLK-----------VGGTSDVEVNEKKDRVT 422
Query: 394 DALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLA 453
DAL + +E V+ GG A+ + + T +++ I R+L + T+A
Sbjct: 423 DALNATRAAVEEGIVLGGGCALLRCIPAL--DSLTPANEDQKIGIEIIKRTLKIPAMTIA 480
Query: 454 VNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKS 513
NA + + +V K+ +E +G D G + + G+ +PT V +
Sbjct: 481 KNAGVEGSLIVEKIMQSSSE------------VGYDAMAGDFVNMVEKGIIDPTKVVRTA 528
Query: 514 LKFATEAAITILRIDDLIKLHPESKDD 540
L A A + + ++ P+ + D
Sbjct: 529 LLDAAGVASLLTTAEVVVTEIPKEEKD 555
>gi|31542947 chaperonin [Homo sapiens]
Length = 573
Score = 58.2 bits (139), Expect = 2e-08
Identities = 107/567 (18%), Positives = 222/567 (39%), Gaps = 76/567 (13%)
Query: 10 DRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
D G R+ + +A+ V ++GP G ++ G +T DG T+ K ++++
Sbjct: 29 DVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKD 88
Query: 70 P----AAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLAC 125
AK++ ++A+ ++E GDGTT+ ++A + K E + + +P + G LA
Sbjct: 89 KYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAV 148
Query: 126 KEAVRYINE---------------NLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFAN 170
+ + + + N D+ + + +A K +I + N
Sbjct: 149 DAVIAELKKQSKPVTTPEEIAQVATISANGDKEIGNIISDAMKKVGRKGVITVKDGKTLN 208
Query: 171 MVVDAVLAIKY----------TDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVV 220
++ + +K+ +GQ ++ +L S ++S++ AL +
Sbjct: 209 DELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIV---PALE-IA 264
Query: 221 GSQGMPKRIVNAKIACLDFS-LQKTKMKLGVQVV-ITDPEKLDQIRQRESDITKERIQKI 278
+ P I+ + S L ++K+G+QVV + P D + + D+
Sbjct: 265 NAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMA------- 317
Query: 279 LATGANVILTTG---GIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLE 335
+ATG V G ++D+ + G + ++ +D + K G E
Sbjct: 318 IATGGAVFGEEGLTLNLEDVQPHDLGKVGEV----IVTKDDAMLLKGKGDKAQIEKRIQE 373
Query: 336 GEETFEAAMLGQAEEVVQERIC--DDELILIKNTKARTSASIILRGANDFMCDEMERSLH 393
E + +E + ER+ D + ++K + G +D +E + +
Sbjct: 374 IIEQLDVTTSEYEKEKLNERLAKLSDGVAVLK-----------VGGTSDVEVNEKKDRVT 422
Query: 394 DALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLA 453
DAL + +E V+ GG A+ + + T +++ I R+L + T+A
Sbjct: 423 DALNATRAAVEEGIVLGGGCALLRCIPAL--DSLTPANEDQKIGIEIIKRTLKIPAMTIA 480
Query: 454 VNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKS 513
NA + + +V K+ +E +G D G + + G+ +PT V +
Sbjct: 481 KNAGVEGSLIVEKIMQSSSE------------VGYDAMAGDFVNMVEKGIIDPTKVVRTA 528
Query: 514 LKFATEAAITILRIDDLIKLHPESKDD 540
L A A + + ++ P+ + D
Sbjct: 529 LLDAAGVASLLTTAEVVVTEIPKEEKD 555
>gi|100816407 Bardet-Biedl syndrome 10 [Homo sapiens]
Length = 723
Score = 49.3 bits (116), Expect = 9e-06
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 21 NVMAAASIAN----IVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLC 76
+V AA +A IV +GP G + G+V ++ +G +L+ L +EHP A+++
Sbjct: 10 SVKAALQVAEVLEAIVSCCVGPEGRQVLCTKPTGEVLLSRNGGRLLEALHLEHPIARMIV 69
Query: 77 ELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHP 114
+ K+ GDG + +I LL+ + ++ P
Sbjct: 70 DCVSSHLKKTGDGAKTFIIFLCHLLRGLHAITDREKDP 107
Score = 31.6 bits (70), Expect = 2.0
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 21/132 (15%)
Query: 408 VVPGGGAVEAALSIYLENYATSMGSREQLAIAE-FARSLLVIPNTLAVNAAQDSTDLVAK 466
V+P GG E L YL NYA E+ ++ A +LL IP L + +
Sbjct: 599 VLPVGGNFEILLHYYLLNYAKKCHQSEETMVSMIIANALLGIPKVLYKSKTGKYSFPHTY 658
Query: 467 LRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILR 526
+RA H L +P + Q G+ E + K + L + IL
Sbjct: 659 IRAVH-----------------ALQTNQPLVSSQTGL-ESVMGKYQLLTSVLQCLTKILT 700
Query: 527 IDDLI--KLHPE 536
ID +I K HP+
Sbjct: 701 IDMVITVKRHPQ 712
>gi|9055272 McKusick-Kaufman syndrome protein [Homo sapiens]
Length = 570
Score = 39.7 bits (91), Expect = 0.007
Identities = 82/430 (19%), Positives = 162/430 (37%), Gaps = 40/430 (9%)
Query: 15 ETIRSQNVMAAASIAN-IVKSSLGPVGLDKMLVDDIGD-VTITNDGATILKLLEVEHPAA 72
E + ++ V S+ IV S GP G K L + G V T+ + +L L V HP
Sbjct: 15 EPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPIL 74
Query: 73 KVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYI 132
K+L D I+ L++N L + PT+VI + + Y+
Sbjct: 75 KILTASIQNHVSSFSDCGLFTAILCCNLIENVQRL---GLTPTTVIRLNKHLLSLCISYL 131
Query: 133 NENLI---VNTDELGRDCLINAAKTSMSSK----IIGINGDFFANMVVDAVLAIKYTDIR 185
+ D L+ ++ ++SK + + + +++ A L +
Sbjct: 132 KSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAE 191
Query: 186 GQPRYPVNSVNILKAHGRSQMESMLISGYALNC--VVGSQGMP-KRIVNAKIACLDFSLQ 242
G + I+ G+ ++S ++ G + V + +P K+ K+A +L
Sbjct: 192 G--HIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLS 249
Query: 243 KTKMKLGVQVVIT------DPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMC 296
G V+ + LDQ+ + + + +L +
Sbjct: 250 GDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQ---------KVIHPS 300
Query: 297 LKYFVEA-GAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQER 355
LK F+ +A+ R+ ++ + K +G + +L ++ G ++V +
Sbjct: 301 LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNS------YGSVKDVCTAK 354
Query: 356 ICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAV 415
+ +A T S++L ND DE++ + AL V++ L+ + GGG
Sbjct: 355 FGSKHFFHLIPNEA-TICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCT 413
Query: 416 EAALSIYLEN 425
E L+ Y+ +
Sbjct: 414 ETHLAAYIRH 423
>gi|25914754 McKusick-Kaufman syndrome protein [Homo sapiens]
Length = 570
Score = 39.7 bits (91), Expect = 0.007
Identities = 82/430 (19%), Positives = 162/430 (37%), Gaps = 40/430 (9%)
Query: 15 ETIRSQNVMAAASIAN-IVKSSLGPVGLDKMLVDDIGD-VTITNDGATILKLLEVEHPAA 72
E + ++ V S+ IV S GP G K L + G V T+ + +L L V HP
Sbjct: 15 EPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPIL 74
Query: 73 KVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYI 132
K+L D I+ L++N L + PT+VI + + Y+
Sbjct: 75 KILTASIQNHVSSFSDCGLFTAILCCNLIENVQRL---GLTPTTVIRLNKHLLSLCISYL 131
Query: 133 NENLI---VNTDELGRDCLINAAKTSMSSK----IIGINGDFFANMVVDAVLAIKYTDIR 185
+ D L+ ++ ++SK + + + +++ A L +
Sbjct: 132 KSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAE 191
Query: 186 GQPRYPVNSVNILKAHGRSQMESMLISGYALNC--VVGSQGMP-KRIVNAKIACLDFSLQ 242
G + I+ G+ ++S ++ G + V + +P K+ K+A +L
Sbjct: 192 G--HIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLS 249
Query: 243 KTKMKLGVQVVIT------DPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMC 296
G V+ + LDQ+ + + + +L +
Sbjct: 250 GDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQ---------KVIHPS 300
Query: 297 LKYFVEA-GAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQER 355
LK F+ +A+ R+ ++ + K +G + +L ++ G ++V +
Sbjct: 301 LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNS------YGSVKDVCTAK 354
Query: 356 ICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAV 415
+ +A T S++L ND DE++ + AL V++ L+ + GGG
Sbjct: 355 FGSKHFFHLIPNEA-TICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCT 413
Query: 416 EAALSIYLEN 425
E L+ Y+ +
Sbjct: 414 ETHLAAYIRH 423
>gi|31543157 glycine-N-acyltransferase-like 1 [Homo sapiens]
Length = 333
Score = 32.7 bits (73), Expect = 0.90
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 375 IILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSRE 434
+I+R M D+M+ + K +S+ V+ V + ++ S+G E
Sbjct: 86 VIIRPQKQEMTDDMDSYTNVYRMFSKEPQKSEEVLKNCEIVNWKQRLQIQGLQESLG--E 143
Query: 435 QLAIAEFARS---------LLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 485
+ +A F++S LLV + L +NA+ S L + H + + E N K+
Sbjct: 144 GIRVATFSKSVKVEHSRALLLVTEDILKLNASSKSK-LGSWAETGHPDDEFESETPNFKY 202
Query: 486 IGLDLS-NGKPRDNKQAGVFEPTIVKVK 512
LD+S +G DN + G E ++ +K
Sbjct: 203 AQLDVSYSGLVNDNWKRGKNERSLHYIK 230
>gi|7706322 homeobox prox 1 [Homo sapiens]
Length = 244
Score = 32.0 bits (71), Expect = 1.5
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 25 AASIANIVKSSLGPVGLDKMLVD-DIGDVTITNDGATILKLLEVEHPAAKVLCELADLQD 83
A + AN K L PV LDK ++ D GD + N+ A IL+LL +E EL +LQ
Sbjct: 168 AVAKANQTKEGL-PVALDKHILGFDTGDAVL-NEAAQILRLLHIE--------ELRELQT 217
Query: 84 KEVGDGTTSVVIIAAE 99
K + + +V I A+
Sbjct: 218 K-INEAIVAVQAIIAD 232
>gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]
Length = 1453
Score = 29.3 bits (64), Expect = 9.9
Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 28/120 (23%)
Query: 200 AHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKL----------- 248
AH R ++E ++I Y GS G K + + I L+ ++ + + +L
Sbjct: 1227 AHERIRLEQLIIDSYEKQQAQGS-GRKKLLSSTLIPPLEITVTEEQRRLLWCYHKNLEDL 1285
Query: 249 GVQVVITDPE----------------KLDQIRQRESDITKERIQKILATGANVILTTGGI 292
G++ V D + +++R+ S +TK +++ + ++ TTGGI
Sbjct: 1286 GLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLELLQTTGGI 1345
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 29.3 bits (64), Expect = 9.9
Identities = 33/174 (18%), Positives = 75/174 (43%), Gaps = 11/174 (6%)
Query: 323 SGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGAND 382
+G ++ T ++ +++ E A + ++++ +CD E ++ K+ S S +L ++
Sbjct: 1470 AGLPVIKTSSSQHSDKS-EEARVEDKQDLLFSTVCDSERLVSSQKKSLMSTSEVLEPEHE 1528
Query: 383 F---MCDEMERSLHDALCVVKRVLESKSVVPGGGAVE-AALSIYLENYATSMGSREQLAI 438
+ E+++ + SK ++P G E A+ S LEN A+ + L
Sbjct: 1529 LPLSLWGEIKKKETELPSSQNVSPASKHIIPKGKDEETASSSPELENLASGLAPTLLLLS 1588
Query: 439 AEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSN 492
+ + + + +T + + D+ E + PE+K+ L+L N
Sbjct: 1589 DDKNKPAVEVSSTAQGDFPSEKQDVALA------ELSLEPEKKDKPHQPLELPN 1636
>gi|46048234 nucleolar protein 8 [Homo sapiens]
Length = 1167
Score = 29.3 bits (64), Expect = 9.9
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 223 QGMPKRI---VNAKIACLDFS-----LQKTKMKLG-VQVVITDPEKLDQIRQRESDITKE 273
QG P+++ +N +A D L KTK K G +Q+ + L ++ Q E + K
Sbjct: 46 QGNPQKVFAYINISVAEADLKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQ-EREAAKA 104
Query: 274 RIQKILATGANVILTTGGID 293
+ ++ AN++ TGG+D
Sbjct: 105 KKEESTTGNANLLEKTGGVD 124
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,241,762
Number of Sequences: 37866
Number of extensions: 654382
Number of successful extensions: 1548
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1472
Number of HSP's gapped (non-prelim): 31
length of query: 556
length of database: 18,247,518
effective HSP length: 107
effective length of query: 449
effective length of database: 14,195,856
effective search space: 6373939344
effective search space used: 6373939344
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.