CCT6A 33593

Name: CCT6A	Sequence: fasta or formatted (486aa)		NCBI GI: 58331171
Description: chaperonin containing TCP1, subunit 6A isoform b		Referenced in: Heat-Shock Proteins and Chaperonins Small RNAs in RNA Processing
Other entries for this name: alt prot [531aa] chaperonin containing TCP1, subunit 6A isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 47 2 C cysteine 1.6 8 1 D aspartate 6.2 30 2 E glutamate 8.0 39 2 F phenylalanine 2.7 13 2 G glycine 7.0 34 2 H histidine 2.3 11 1 I isoleucine 6.0 29 2 K lysine 8.8 43 2 L leucine 10.9 53 2 M methionine 2.9 14 1 N asparagine 3.5 17 2 P proline 2.7 13 1 Q glutamine 2.7 13 1 R arginine 5.1 25 2 S serine 4.7 23 2 T threonine 4.7 23 1 V valine 9.1 44 2 W tryptophan 0.2 1 1 Y tyrosine 1.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chaperonin containing TCP1, subunit 6A isoform b [Ho... CCT6A 0.976 chaperonin containing TCP1, subunit 6A isoform a [Hom... CCT6B 0.840 chaperonin containing TCP1, subunit 6B CCT3 0.195 chaperonin containing TCP1, subunit 3 isoform b [Hom... CCT3 0.195 chaperonin containing TCP1, subunit 3 isoform a [Hom... CCT5 0.186 chaperonin containing TCP1, subunit 5 (epsilon) [Hom... CCT3 0.170 chaperonin containing TCP1, subunit 3 isoform c [Hom... TCP1 0.170 T-complex protein 1 isoform a CCT4 0.168 chaperonin containing TCP1, subunit 4 (delta) CCT7 0.168 chaperonin containing TCP1, subunit 7 isoform a [Homo... CCT2 0.149 chaperonin containing TCP1, subunit 2 TCP1 0.127 T-complex protein 1 isoform b CCT7 0.118 chaperonin containing TCP1, subunit 7 isoform b [Hom... CCT8 0.113 chaperonin containing TCP1, subunit 8 (theta) CCT8L2 0.066 T-complex protein 1 HSPD1 0.022 chaperonin HSPD1 0.022 chaperonin CEP250 0.012 centrosomal protein 2 EIF3A 0.011 eukaryotic translation initiation factor 3, subunit 1... GOLGB1 0.010 golgi autoantigen, golgin subfamily b, macrogolgin ... DNAH7 0.009 dynein, axonemal, heavy chain 7 MYH2 0.009 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.009 myosin, heavy chain 2, skeletal muscle, adult [Homo... CCDC91 0.009 GGA binding partner HMMR 0.008 hyaluronan-mediated motility receptor isoform d [Ho... HMMR 0.008 hyaluronan-mediated motility receptor isoform a [Ho... HMMR 0.008 hyaluronan-mediated motility receptor isoform c [Ho... HMMR 0.008 hyaluronan-mediated motility receptor isoform b [Ho... TPR 0.008 nuclear pore complex-associated protein TPR RNASEL 0.008 ribonuclease L Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.