BBS10 17

Name: BBS10	Sequence: fasta or formatted (723aa)		NCBI GI: 100816407
Description: Bardet-Biedl syndrome 10		Referenced in: Planar Cell Polarity
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 34 3 C cysteine 3.0 22 2 D aspartate 3.7 27 2 E glutamate 5.4 39 2 F phenylalanine 3.6 26 2 G glycine 5.7 41 2 H histidine 3.3 24 1 I isoleucine 6.4 46 2 K lysine 5.5 40 2 L leucine 12.0 87 3 M methionine 2.8 20 1 N asparagine 4.0 29 2 P proline 4.3 31 2 Q glutamine 5.0 36 1 R arginine 4.0 29 2 S serine 9.0 65 3 T threonine 6.6 48 1 V valine 6.9 50 2 W tryptophan 0.4 3 1 Y tyrosine 3.6 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Bardet-Biedl syndrome 10 CCT5 0.021 chaperonin containing TCP1, subunit 5 (epsilon) [Hom... CCT3 0.018 chaperonin containing TCP1, subunit 3 isoform a [Hom... TCP1 0.017 T-complex protein 1 isoform a CCT6B 0.017 chaperonin containing TCP1, subunit 6B CCT3 0.016 chaperonin containing TCP1, subunit 3 isoform b [Hom... CCT2 0.015 chaperonin containing TCP1, subunit 2 CCT8L2 0.015 T-complex protein 1 CCT6A 0.015 chaperonin containing TCP1, subunit 6A isoform a [Hom... CCT7 0.015 chaperonin containing TCP1, subunit 7 isoform a [Homo... CCT4 0.014 chaperonin containing TCP1, subunit 4 (delta) CCT8 0.010 chaperonin containing TCP1, subunit 8 (theta) MKKS 0.010 McKusick-Kaufman syndrome protein MKKS 0.010 McKusick-Kaufman syndrome protein PLEKHA6 0.006 phosphoinositol 3-phosphate-binding protein-3 HSPD1 0.006 chaperonin HSPD1 0.006 chaperonin ZFHX4 0.005 zinc finger homeodomain 4 TCP1 0.005 T-complex protein 1 isoform b STRBP 0.005 spermatid perinuclear RNA binding protein RIPK1 0.004 receptor (TNFRSF)-interacting serine-threonine kinas... LOC100134147 0.004 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.