Guide to the Human Genome
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Name: BCL2L11 Sequence: fasta or formatted (138aa) NCBI GI: 5729740
Description:

BCL2-like 11 isoform 6

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [198aa] BCL2-like 11 isoform 1
alt prot [112aa] BCL2-like 11 isoform 9
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         14           2
 C cysteine            2.2          3           1
 D aspartate           5.1          7           1
 E glutamate           6.5          9           1
 F phenylalanine       2.2          3           1
 G glycine             2.2          3           1
 H histidine           2.2          3           1
 I isoleucine          3.6          5           1
 K lysine              1.4          2           1
 L leucine             7.2         10           2
 M methionine          5.1          7           1
 N asparagine          2.9          4           2
 P proline            10.9         15           2
 Q glutamine           8.0         11           1
 R arginine           11.6         16           2
 S serine              7.2         10           2
 T threonine           2.9          4           1
 V valine              3.6          5           1
 W tryptophan          1.4          2           1
 Y tyrosine            3.6          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-like 11 isoform 6 
BCL2L11               0.764   BCL2-like 11 isoform 1 
BCL2L11               0.483   BCL2-like 11 isoform 9 
TBKBP1                0.030   TBK1 binding protein 1 
AKIRIN1               0.027   akirin 1 isoform 2 
AKIRIN1               0.027   akirin 1 isoform 1 
POU6F2                0.027   POU domain, class 6, transcription factor 2 
LRRC68                0.023   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.023   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.023   PREDICTED: leucine rich repeat containing 68 
SGK269                0.023   NKF3 kinase family member 
PLEKHA4               0.023   pleckstrin homology domain containing family A memb...
AIM1                  0.023   absent in melanoma 1 
KCP                   0.019   cysteine rich BMP regulator 2 isoform 1 
SRRM2                 0.019   splicing coactivator subunit SRm300 
MAST1                 0.019   microtubule associated serine/threonine kinase 1 [Ho...
SFRS15                0.019   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.019   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.019   splicing factor, arginine/serine-rich 15 isoform 1 [...
QSOX1                 0.019   quiescin Q6 sulfhydryl oxidase 1 isoform a 
LACTB                 0.019   lactamase, beta isoform a 
LACTB                 0.019   lactamase, beta isoform b 
LOC100271715          0.019   DH and coiled-coil domain-containing protein 
SOX9                  0.019   transcription factor SOX9 
RBBP8                 0.019   retinoblastoma binding protein 8 isoform b 
RBBP8                 0.019   retinoblastoma binding protein 8 isoform a 
RBBP8                 0.019   retinoblastoma binding protein 8 isoform a 
RSPH4A                0.019   radial spoke head 4 homolog A isoform 2 
RSPH4A                0.019   radial spoke head 4 homolog A isoform 1 
LOC441617             0.019   PREDICTED: similar to hCG1820409 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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